Thalassiosira pseudonana: THAPSDRAFT_11606
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Entry
THAPSDRAFT_11606 CDS
T01078
Name
(RefSeq) predicted protein
KO
K17655
mitochondrial ribonuclease P protein 3
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tps03029
]
THAPSDRAFT_11606
Mitochondrial biogenesis [BR:
tps03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial ribonuclease P
THAPSDRAFT_11606
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Gene cluster
GFIT
Motif
Pfam:
PRORP
PPR_long
Motif
Other DBs
NCBI-GeneID:
7447769
NCBI-ProteinID:
XP_002294639
JGI:
11606
UniProt:
B8CF13
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Position
20:641052..643589
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AA seq
845 aa
AA seq
DB search
MSEEPSSAGSASADVSNRPPPPIGVDVEPSPLLPDAKEDAADDGHVDKKARIEKLPDGAT
TDAALANTTATSINDHKNNEPIIDITNLEQMYNAQLINDYVHFHQSYNSTNTSMAPVKKK
KGKRSSKNKMDPQILTTRRSIQLCCRDNTLSSALCVFHTALRDKVYLEPQTLYNLLNLCA
DGSVTGDGESGGKGGGDGSKMTKKKGRVHVGTPRFPKKGAKDEDGNEYNDGGDAADAKNE
KRECNNNETTRSTTTTTSDIKLTTPLRLQHATQIHSLLTKLHIPLTEPAFTALVRLSTRA
GDYQRAEMYLDDAERTQQCKGKLRMYSSLLKGYCGIAVDDGDYGNKDEEEGAANKVGPTK
EGLVKALKVWKRMYDHSGGPSPGHPTANSGNPNDDDNSNNTTNETTLFGEGISPKITLTE
YEYSALMQCATAIHDASVMERVLSDLAERILVPGLSTTENIMNWFRSDRCGGVTTITSEN
HTSSSSSALEEVVLPPREGGSIGEVSNLNGKGWKIYNNCTIDTSNGKLTLTGHTSDTAQY
QLKPVLLTDNAWDEMRRMNQTIVLEGHVEGHVSEFQGGGKGKKRPRGEGSGGGGRGGRGD
NRGGNSNKNNSNHKTERWKKFEGFIERHPSFDVVIDGANVGYYQQNFGNAPKHVDYKQID
GLLRHVLEGNSHEHHVILFLHERHFAERLVPSWAWPIIRDWDSDKSPYNRLTVYRTPVGM
DDDWYWMHAALMNGGKKDAPPVLTISNDEMRDHHFQMLAHGSFLRWKERHQVRFDFGHWN
NRIGRRDVLLEYPSSYSRRIQRLDGGAIAIPLPKKGDEGRFIDGTHVADDGAPMDETYVV
IERVV
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagagccgtcatctgcaggcagtgcatcggctgatgtgtcaaatcgtccaccg
ccaccgatcggcgtagacgtagagccatcaccactgctacctgatgccaaggaagatgct
gctgacgatggacacgtggacaaaaaggctcgaatagagaaacttcccgacggtgcgact
actgatgcagctcttgcaaacaccacggcaacatccatcaacgaccacaaaaacaacgag
ccaataatagacatcaccaatttggaacaaatgtacaacgcccaactcatcaatgattac
gtccacttccaccagagctacaactccaccaacacctctatggctccagtcaagaagaaa
aaggggaaacgctcctccaaaaacaaaatggatcctcaaatcctcacaactcgtcgctcc
atccaactatgctgtcgtgacaacacactctcctccgcactttgtgtattccatacggca
ttgagagacaaggtgtatttggaaccgcagacgttgtataatttgttgaatttgtgtgcc
gatggtagtgttactggtgatggagagagtggtggtaaagggggcggtgatgggagtaag
atgacgaagaagaaggggagggttcatgttggcactcctagatttccaaagaagggcgcg
aaagatgaggatggcaacgaatataacgacggtggcgatgcggctgatgcaaagaatgaa
aagagggaatgcaacaacaatgaaacaactcgatcaacgacgacaacaacatccgacatc
aaactaacaacccccctccgtctccaacacgccacccaaatccactcactcctcaccaaa
ctccacataccccttactgaaccagcctttacggccctcgtacgcctttctacccgtgcg
ggtgactatcaacgtgccgagatgtatttggacgatgctgagaggactcagcagtgtaaa
ggaaagttgaggatgtacagtagtttgttgaaggggtattgtggtattgctgttgatgat
ggagactatggaaacaaagatgaggaagagggtgctgctaacaaggttggtccgacaaag
gaaggattggtgaaggcattgaaagtgtggaaacgaatgtatgatcatagcggtggacct
tctcctggacatccaactgcaaacagcggcaacccaaacgacgacgacaacagcaacaat
acaacaaatgaaacaacactctttggtgaaggaatctcacccaagattaccctcactgag
tatgaatactcggccttgatgcaatgtgccactgcaatacacgatgcatcggtgatggaa
cgagtgttaagcgatttggcagaacgtatattagttcctggattgagtaccacggagaat
attatgaattggttccgttccgaccgctgtggtggtgtaacaacgataacatcagagaat
catacttcctcttcttcctctgcattggaggaagtagtgttgcctccgagggaaggaggt
tccattggtgaggtgtccaatctgaatggtaaggggtggaagatttacaacaactgtacg
attgatacgagcaatggcaagttaacattgactggtcatacttcggatacggctcagtat
caactcaaaccggtattgctgactgacaatgcatgggatgaaatgagacgaatgaatcaa
accattgtgttggaggggcatgtggagggacatgtgagtgagtttcaaggtggcggaaag
ggaaagaagcgtcctcgtggtgaaggtagtggtggcggaggacgaggaggaagaggagac
aaccgaggaggaaacagcaacaagaacaacagcaatcataagacggaacggtggaagaag
tttgaaggtttcattgagcgacatccttcattcgatgtggtaattgacggtgccaatgtt
ggatactatcaacagaactttggcaacgctccgaagcatgttgactacaagcagattgat
ggacttctgcgtcatgtattggagggcaactcacatgagcatcacgttattctcttttta
cacgaacggcacttcgccgagcggctagtgccttcttgggcttggccgattatacgtgat
tgggacagcgacaagtcaccttacaatagactcactgtgtatcgtactcccgttggtatg
gatgatgattggtattggatgcatgcggcactaatgaatggtggaaagaaggatgcacct
ccagtactgactattagcaatgacgagatgagggatcatcactttcagatgctggctcat
ggttcgtttctgcgttggaaggagcgacatcaggtacgatttgactttggtcattggaac
aataggattgggaggagagatgtgttgcttgagtatccgagtagctacagtcgacgtatt
cagagattggatgggggagcaatagcaatacccttgccgaagaagggtgatgaagggagg
tttattgacggtactcatgttgccgacgatggggcccccatggatgagacgtatgttgtg
atagagagagtggtgtag
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