Thalassiosira pseudonana: THAPSDRAFT_11996
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Entry
THAPSDRAFT_11996 CDS
T01078
Name
(RefSeq) predicted protein
KO
K05288
GPI ethanolamine phosphate transferase 3 subunit O [EC:2.7.-.-]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
THAPSDRAFT_11996
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Gene cluster
GFIT
Motif
Pfam:
Phosphodiest
Metalloenzyme
TY-Chap3
Motif
Other DBs
NCBI-GeneID:
7448271
NCBI-ProteinID:
XP_002295211
JGI:
11996
UniProt:
B8CG60
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Position
23:complement(91408..94551)
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AA seq
1047 aa
AA seq
DB search
MTNPRRKTASSASSRKAAVPSTASNNNLHDDDHEPSPSLMSSPDSPCPDNESSNKLHSLY
LLLPPLLLLSGLSVFTQSFFLSRTAFTARSSCQIGSAGELLVDALQLSEDHVDFMRDEGW
LTDSKGVNGGGGCWTPRRVDSMAILVVDALRFDFARDHLPLSVGSRLFPGKLSNSTRSKG
RGYSQLYQFVADPPTVTMQRLKGLTTGGLPTFADITGSFGGASVDEDSWVEQLKNTPWTR
RHHISVGGDGSKKPLIGFVGDDTWVDLFPTQFDDSNPYPSFNTRDLDTVDNGCLMHLPRL
LDGLLGLKKQSEFSSNNKHNNATSFELIVAHFLGVDHVGHTYGPNDPHMERKLNQMDGML
SHTLDAIDDAPEESCIVAFVLGDHGMTEDGNHGGGTSEEVNAGLFVHFSPGCHYEDESMQ
QYRIGRLDGGEIGFDSVRAFESIHQIDLVPTISLLLGLPIPYANIGGLVPDLLPTPRTGS
GDVASPTPHSATALALNAAQVWSYLDAYSKISSDLPVDRLKELKELLDSATLVFKEALAS
SQKQALLHADEGKQHHDSIAYRQACGLFKLFLAESTDLGKRVWTQFNEGGMMFGIGILVV
AWIMTFPLWKRNVRNELWAVLSWRRSDDSMKGHIKCAETASHNKLVPSASSMQSFRQIEL
IAAIAFMIFQCGVLTFGNSYIDHEREVVTFFLAILCLLVFRRWYFATAGHTSNAGLQNSV
VYLPLMVAFSARANDVFVTGHGLDPSIRMHLAHHSVVFLSSLLVLILLRLRWFCGSSSRS
ALIDVVAIICLAFSWWEKRSRDHSRNGFIMARCAIALIFAGLLHSCYAMYRRKRMTSKGG
YRSDREWTEMTQLASFRAMMFITIVTGPSTASTAVLMVVQTAALSQMMEAGGNREIDAPV
MAALWRLAIRHVFFATNHHCSFNRLHFSAAFVATETFEFHIAGASLFMNTFGWEIIGTTL
VLVLSRTCRGKARRSVWTWFCFYQWTETVASCMSVSVMKRHLMVWAIFAPRFMFAAVFTG
LTLFLCFVDVVVSIVTTSSAVMRKQLV
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacccaagacgaaagactgcatcatctgcttcgtctagaaaagcagcagtgcca
tcaacagcatcaaacaacaacctccatgacgatgatcacgaaccatcaccatcactgatg
tcatcaccagattcaccatgccccgacaatgaatcaagcaacaaactccactccctctat
ctcctcctgccgcccctcctcctcctatccggcctatcagtattcacacagtccttcttc
ctctcgcgcaccgccttcaccgcccgttcctcgtgtcaaattggtagtgcgggagagttg
ttggtggacgctttacagttgagcgaggatcatgtcgactttatgagggacgaaggctgg
cttacggatagtaagggtgtgaacggaggaggaggatgctggactccgcgaagagtggac
agcatggccattcttgttgtggatgcattacggtttgattttgcgagggatcatttgcca
ttgtcggttgggtcacgattgtttcccggtaaattgtccaacagcacacgctcaaaggga
agggggtactctcaactataccagtttgtggcggaccctcctactgtgacaatgcaacgt
ttgaaaggattgactaccggtgggctacccacctttgcggatattactggttcgtttggc
ggtgcttctgttgatgaagattcttgggtggagcagttgaagaatactccttggacgagg
aggcatcatatcagtgttggtggtgatggctctaagaagccactgattggctttgtggga
gatgatacgtgggtagatctcttccctacgcagtttgatgacagtaatccatacccatcg
ttcaatacacgagatttagacactgttgacaatggatgtctgatgcatctgccacgattg
ttggatggactgctcggcttgaagaagcagtctgaattcagcagcaataacaaacacaac
aatgcgacatcctttgagctcatagtagctcacttcctcggggttgaccacgtaggacac
acttacggaccaaacgatcctcatatggaacgcaaattgaatcaaatggatggaatgcta
tcacatacattggatgcgattgacgatgctccggaagaatcatgcatcgtggcgtttgta
ttgggtgatcatggcatgacggaggatgggaatcatggtggtggaacaagtgaggaggtg
aatgctgggctgtttgtacactttagtcctgggtgtcattacgaagatgaaagtatgcaa
caataccggattggacgattggacggaggagagattggttttgattctgtcagagcattt
gaatccatccatcagattgacctggtacctacgatttcactgctgttaggtcttcctatt
ccgtatgccaacattggcggattggtaccagatttgcttccaacacctcgtactgggagt
ggcgatgtagcttcgccgactcctcatagtgccacggctcttgcactcaatgcagctcag
gtttggagttatcttgatgcctactccaagatatcttctgatttgccggtggatagattg
aaagaactcaaagagctgttggattcggctacgttggtgtttaaggaagcactggcttct
tctcagaagcaagcgttgctgcatgcagacgaaggcaagcaacatcatgattctatcgcc
taccgacaggcctgtggtctattcaaactattcttggcagagagtaccgacttgggaaaa
cgagtgtggactcaattcaatgaaggtggaatgatgtttggcatcggcattttagtagtt
gcttggattatgacatttcctttgtggaagaggaatgtaaggaatgaactgtgggctgtt
ctttcttggcgtaggagcgacgatagtatgaaaggtcatatcaaatgtgcggagactgca
tcccacaacaaactagtaccaagtgcttcatcaatgcagtcgtttcggcagattgaactg
attgctgcaattgcattcatgatattccaatgcggagtactcacgttcggaaacagctac
attgatcacgaacgagaagttgtgacattcttcttggcgatactgtgcctcttggtgttt
cgtcgatggtactttgcgactgctggccacacatcaaatgctgggctacagaattcagta
gtctatcttcctttgatggtggcgtttagtgctcgggcaaatgatgtatttgttactggt
catggattggatccttctatccgcatgcatcttgcccaccactctgtggtcttcttatca
agtctcttggtattgattttacttcgcctacgttggttttgtggttcttcgtcgcgctcg
gctctcattgatgtagtggctatcatctgcctagccttcagttggtgggagaagcgaagc
cgtgatcattctcgcaacggattcatcatggcgaggtgtgcaattgctttgatttttgca
ggacttttacattcatgctatgcgatgtaccgaagaaagaggatgacgtctaaaggtggc
tatcgctctgacagagagtggacagagatgactcaattggcatcgtttcgtgcaatgatg
ttcattacgatcgtcaccggtccttcaacggcatcaaccgctgtcttgatggttgtacag
actgcagcattgagtcaaatgatggaggcaggtgggaatagagagattgatgcacccgtc
atggctgccttgtggagactcgccatccgacacgtcttcttcgcgacaaatcatcattgt
tccttcaatcgtctgcacttctctgcagcttttgttgccacggagacatttgagtttcac
atcgcaggagcctccttgtttatgaatacgtttgggtgggagataatcgggactacgctg
gtcttggtgctatctagaacttgccgaggaaaggcaagaaggagtgtttggacctggttt
tgcttctatcagtggacagaaacagtagcatcgtgcatgtctgtgagtgtgatgaagaga
catctcatggtgtgggcaatattcgctccacggttcatgtttgcggctgtcttcacaggg
ctcacgttgtttctttgcttcgttgatgtcgttgtgtcgatagtgacaacgtcgtcggca
gtcatgagaaagcaacttgtatga
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