Thalassiosira pseudonana: THAPSDRAFT_13065
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Entry
THAPSDRAFT_13065 CDS
T01078
Symbol
CAT1_2
Name
(RefSeq) carnitine acetyl transferase
KO
K00624
carnitine O-acetyltransferase [EC:
2.3.1.7
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
THAPSDRAFT_13065 (CAT1_2)
Enzymes [BR:
tps01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.7 carnitine O-acetyltransferase
THAPSDRAFT_13065 (CAT1_2)
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Gene cluster
GFIT
Motif
Pfam:
Carn_acyltransf
Motif
Other DBs
NCBI-GeneID:
7447893
NCBI-ProteinID:
XP_002293648
JGI:
13065
UniProt:
B8CBV0
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Position
13:complement(934217..936571)
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AA seq
641 aa
AA seq
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SLPRLPIPSLEDTMARFPAAVCALLSSSHDSDDGSSSPSDIHGVNTKEMEECLASIHNFL
ETDGPPLQKMLVEYERKGREDGTLGSFVEEFWSDAYLAPDSSVVMNLNPFFVLEDGPDTK
KSKDQCSRAASLCFSAIKLASSLKNETLVPDAFKGKPLCMDQFRALFGACRVPETENKDT
VAVNPDSTHVVVLDNNQMYFFQALWPDGTVAVNEEDILQILLAIRADASKVAPEVSSRNA
LGVLTTLPRREWASARDHIISSSIHNSTALDIVDGALFILVIDDMTPKDIHEAAANMLHG
TYNLRSEDNLNNLVDYQAGTCTNRWYDKLQVIVCKDGRAGINFEHSAIDGHTALRFVSDI
FADNVVSFAQSITQTVYSDRHMFPPLIQAHLRRASLEHPQLVAPRKLTFELPQCVLDKIY
YAETSLSDQIVASDTFVLEFTGYGKNFIVRNKMSPDSYVQLSMQLAYYRLYGKIVSQYEP
VLTKAFYHGRTEAMRTATEKAALFCKKWLDPSATNEEKLEALRVATQYHSAGIKLASTGQ
GIERHLFALKCIADKNGIPTPDFFSSEAYTRLNHTILSTSNCGNPSLKLFGFGPVVQDGF
GIGYIIRDSGLQYSISSKHRQTKRYAHTLKQTLIDMGKLLQ
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
tctcttccgagacttcccattccatcgttggaggatacaatggcaagatttcctgcggcg
gtgtgtgctctgctatcgtcgtctcacgacagtgatgatggctcgtcgtcaccatctgac
attcatggcgtcaacaccaaagagatggaggaatgcctcgcatccattcacaactttctt
gaaacggacggaccgccgttgcaaaagatgctggtggaatacgagcgaaaagggagggag
gacgggacgctagggagctttgtggaggagttttggagtgatgcgtatttggctcccgat
tcgagtgtggtgatgaatctgaatccgttctttgtgttggaggacggacccgacacaaag
aagagcaaggatcaatgcagtagagctgcaagcctctgcttctctgcaatcaaattggca
tcgtctctaaaaaatgaaacgttggttccggatgcgttcaaggggaagcctctttgtatg
gatcaattcagggctctcttcggtgcatgtcgtgttccagaaacagaaaacaaagacacc
gtggcagtgaatccagactctacccacgtggttgtactcgacaataaccaaatgtacttc
tttcaggcattatggcctgacggtactgtggccgtgaatgaagaggacattctgcaaatt
ctactggcgattcgggcagatgcatcaaaggtggctccagaagtttctagtcggaatgca
ttgggggtcttaacaactcttccccgccgagaatgggcgtcagcgcgagatcacatcata
tccagttcaatacacaacagtactgcattggatatcgtagacggagctctgttcattcta
gtgattgacgacatgactccgaaagatattcatgaggctgcagcaaacatgcttcatggg
acatacaatctacgaagcgaggataacttgaacaatttggtggattatcaagcggggacg
tgcaccaatcgctggtatgataagttgcaggtcattgtatgcaaagatggtcgtgctgga
atcaactttgagcactctgccattgacggtcataccgcactgcgtttcgtctcggacata
tttgccgacaacgtggtatcatttgcacagagcatcacccaaactgtctactcggatcgg
cacatgtttccaccattgattcaagctcacttgaggagggcgtcgttggagcatcctcaa
cttgttgcgccgagaaagctcaccttcgaactcccacaatgtgtgctggataagatttac
tacgcggaaacttccttgtcggatcagatcgtggcgagtgatacttttgtgttggagttt
acaggctacgggaagaactttatcgtacgcaacaaaatgagtccggactcatacgttcag
ctgtcgatgcaacttgcctactaccgtctctacggaaagatcgtcagtcagtatgaaccg
gtcctcaccaaggcattctaccacggacgcacggaagcaatgcgcacagccactgaaaag
gctgctctcttttgcaaaaagtggttagatccctcggctaccaatgaagagaagctggag
gcattgcgagtggctactcaatatcactcagcaggtatcaaactggcatcgactggccag
ggcattgaaaggcacttgtttgcattgaagtgtattgcggataagaatggaatccctact
ccagacttcttctcgtcggaggcgtatacgaggttgaatcatacgatactgtcgacgtcc
aattgtggcaatcctagtttgaagttgtttggattcggaccggttgtacaagatggattc
ggaataggctacatcatacgagacagtggactccaatactccatctccagcaagcatcgt
caaacaaagcgatacgctcacacactgaaacaaactctcatcgatatgggcaaactgcta
caa
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