Thalassiosira pseudonana: THAPSDRAFT_13149
Help
Entry
THAPSDRAFT_13149 CDS
T01078
Symbol
DIC2
Name
(RefSeq) outer dynein arm intermediate chain subunit-like protein
KO
K10409
dynein axonemal intermediate chain 1
Organism
tps
Thalassiosira pseudonana
Pathway
tps04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
THAPSDRAFT_13149 (DIC2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tps03037
]
THAPSDRAFT_13149 (DIC2)
04812 Cytoskeleton proteins [BR:
tps04812
]
THAPSDRAFT_13149 (DIC2)
Cilium and associated proteins [BR:
tps03037
]
Motile cilia and associated proteins
Dynein arm
THAPSDRAFT_13149 (DIC2)
Cytoskeleton proteins [BR:
tps04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
THAPSDRAFT_13149 (DIC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_EML_2
Beta-prop_RIG_2nd
WD40_WDHD1_1st
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_EIPR1
Beta-prop_HPS5
WDR55
Beta-prop_Aladin
EIF3I
ANAPC4_WD40
Beta-prop_WDR3_2nd
Beta-prop_WDR19_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_RFWD3
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_RSE1_2nd
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
7446352
NCBI-ProteinID:
XP_002291652
JGI:
13149
UniProt:
B8C4P0
LinkDB
All DBs
Position
6:complement(1899635..1901596)
Genome browser
AA seq
618 aa
AA seq
DB search
PPIPAIQEPVKRIVKPGNQLELSEQALEQDVTRILTGDDPNVPKNVCKFSFKDRCYKPDP
PGQGDNMAIHFSLQGSSFHIDSAECKKYQEANSFNDQSVDAKETTSDTKITSESQMVTPT
TSSGNSTTSSGTGIKGEHTKNQFNYSERGSQTFNNPMKSRGVHTEPPPMTQYQDDVSQSK
IYDSYKSECLISMMEHQQEGNGDIRSFEDKLASIVMDKGEIVEDRSDTIHSEHMENALKV
MERLVNQNAEDDIFQDFKYWEDASDQYRQHGEGTLLPLWKFSTERTNRKQVTSLCWNPRY
NDLFAVGYGSYDFMRQGNGIVCCFSLKNTSYPEYAITTESGVMCLDFHPQHPSLLALGCY
DGTVLVYDIGNGRNKPIYSSSSRSGKHSDPVWQVCWHDSGYSKDFNFYSVSSDGKVANWT
MSKNELKMETVMQLKLVSSSKEATDEPSLCRLAGGSSFDFSETLENKFLVGTEEGNIHEC
SKAYSGQYIKTYDGHHMGVHTVKWNPFHEDIFISCSSDWTVKIWDQKTAQCILHFDLNNS
VSSVCWSPYSSTVFAAVTTDGKVHVFDLAQNKREPLCAQKVAKKARLTHVSFNLKDYILI
VGDDRGVVHALKLSPNLR
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
cctccaattccggcaattcaagaaccagtcaaaagaatagtcaaaccaggcaatcaactg
gagctatccgaacaagctttggagcaagatgttactcgtatattgacgggagacgatccc
aacgtgccaaagaatgtctgcaagttcagcttcaaagacagatgttacaagcccgatcca
cccggtcaaggtgataacatggctatccacttttctctacagggaagcagttttcatatt
gatagtgccgagtgtaaaaagtatcaagaggcgaacagctttaatgatcagagtgttgat
gcaaaggagacaacttctgatactaagattacttccgagagtcaaatggtaacgccaacc
accagctctggaaattccaccacttcgtctggtaccggcataaagggagagcacaccaag
aatcagttcaactactcggaacgaggatctcagaccttcaacaacccaatgaagagtcga
ggagtgcataccgagccaccaccaatgactcaataccaagatgatgtgagccaatccaaa
atctacgacagctacaagagcgagtgtctcattagcatgatggaacatcagcaagaaggt
aacggtgatattcgtagcttcgaagacaaactggcctccattgttatggataagggtgaa
atcgttgaagacagatccgatacgatccacagtgagcacatggagaatgcgttgaaggtt
atggaacgtctcgtcaatcagaacgccgaagacgacatctttcaagactttaagtactgg
gaggatgccagtgatcaataccgacaacacggagaaggcacattgctcccactgtggaag
ttttcaacggaacgaaccaatcggaagcaagtcacttcgctctgctggaacccacgatac
aatgatttgtttgctgttggatacggttcctacgactttatgagacaaggcaatggaatt
gtatgttgcttctcgctcaagaacacatcctatccagagtatgccattaccaccgagagt
ggagttatgtgcttagatttccatcctcaacacccgtcattgctcgccctgggatgctat
gatggaaccgtattggtgtacgacattgggaacggaagaaacaagcccatctactcctcg
tcatcgcgatctggaaagcattccgatccagtgtggcaagtatgctggcacgatagtgga
tactccaaagactttaacttctattccgtctcgagtgatggaaaggttgccaattggaca
atgagcaagaatgagctcaagatggaaacagtaatgcaattgaagctcgtcagctcgtca
aaggaagcaacggacgagccatcgttgtgtagattggcaggaggaagttctttcgacttc
agcgagactctagagaacaagttcttggttggaacggaagagggaaacattcacgaatgt
tccaaggcatatagtggtcagtacatcaagacgtacgatggccatcacatgggtgttcat
actgtcaagtggaatccgtttcacgaagacatcttcatctcgtgctcgtctgattggact
gtcaagatatgggaccaaaaaacagcccaatgcatcctgcactttgacctaaacaactcc
gtctcctccgtctgctggtcaccctactcctccaccgtattcgctgccgtcaccaccgac
ggcaaagtccacgtatttgatctcgctcaaaacaagcgtgaaccactgtgtgctcaaaag
gtcgcgaagaaggcacgtttgacgcatgttagtttcaatttgaaggattacatcttgatt
gtgggtgatgatcggggtgtggttcatgcgttgaagttgtcacctaatttgaga
DBGET
integrated database retrieval system
