Thalassiosira pseudonana: THAPSDRAFT_13156
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Entry
THAPSDRAFT_13156 CDS
T01078
Symbol
ACS1
Name
(RefSeq) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00061
Fatty acid biosynthesis
tps00071
Fatty acid degradation
tps01100
Metabolic pathways
tps01212
Fatty acid metabolism
tps04146
Peroxisome
Module
tps_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
THAPSDRAFT_13156 (ACS1)
00071 Fatty acid degradation
THAPSDRAFT_13156 (ACS1)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
THAPSDRAFT_13156 (ACS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tps01004
]
THAPSDRAFT_13156 (ACS1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_13156 (ACS1)
Enzymes [BR:
tps01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
THAPSDRAFT_13156 (ACS1)
Lipid biosynthesis proteins [BR:
tps01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
THAPSDRAFT_13156 (ACS1)
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of breast milk
THAPSDRAFT_13156 (ACS1)
Exosomal proteins of breast cancer cells
THAPSDRAFT_13156 (ACS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
RIO1
Ca_bind_SSO6904
Motif
Other DBs
NCBI-GeneID:
7443152
NCBI-ProteinID:
XP_002286889
JGI:
13156
UniProt:
B8BRF3
LinkDB
All DBs
Position
1:complement(1955662..1957317)
Genome browser
AA seq
552 aa
AA seq
DB search
LAIFENTCPEWMIGALGAYSQSISITTVYATLGIDAVIDSINDGRIRAILCNKRNVSLLL
SKIKDMPSLKHIIYTNDMIAPGESVNIATPPKDVKVSSFEDFVNAGDTKAFPIVPPTPET
CAVIMYTSGSTGKPKGVVVTHKNVLATTSMVTEIINENDVFVAYLPLAHIFELVAEFSCL
AMGSCICYADPKTLTATGSYPVGALEQYRPTLMVGVPKIWDVIKKGIQAKVAGGSKVAQF
LVATAFEARSRAMKLGFDTPLFKALVFKKFSKVVGGRLRLAVSGGGPLNADVQGFISTCF
GCPLGQGYGLTETCAGLTLQDLADDRVGIAGVPIPCVEVKLVSCPEINDKAGLPYLTSDR
KDVNGKSVFGRGEIWVKGANVGLGYYMMAEKSKEDFDEDGFFHTGDIGQFADDGSVQIVD
RKKNLIKLKGGEYIAVENMEMTYGNCSFVDAVAGGICCYGDGDMDRPIAIMQLNHVVVMN
WAKDNGVAGDFDKVKDSKELYDAVMQEMEQEQKKAGLSHIEKLIAIAFVTDPWTPENGCL
TAANKLQRRAVV
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
cttgccatctttgagaacacgtgtcctgagtggatgattggtgcccttggtgcctattct
cagagcatcagtatcacgactgtctacgcaactcttggaattgatgcagtgattgactcg
atcaacgatgggaggattcgtgccattctctgtaacaagaggaatgtttcactcttgctc
agtaagatcaaggatatgccatccctcaaacacatcatttacaccaacgatatgattgct
cccggggagagcgttaatatcgccactccacccaaggatgtaaaggtttcttccttcgag
gactttgtgaacgctggagacactaaagcattccccatcgttccccccacaccagagact
tgtgccgtcatcatgtatactagtggatctactggaaaacctaagggagttgtcgtcacc
cataagaatgtgttggctactacgtccatggttactgaaatcatcaacgagaacgacgtg
tttgttgcctaccttccacttgctcacatttttgagctcgttgcagagttctcctgcctt
gcaatgggttcgtgcatttgctatgcggatccaaagactcttactgcaacagggtcttat
ccagttggagcattggaacaatacagacctacgcttatggttggagtgccgaagatttgg
gacgttatcaagaagggaatccaggccaaagttgcgggtggatccaaagtggctcagttc
cttgttgcgactgcgtttgaagctcgtagtcgtgccatgaagttgggatttgatacacca
ttgttcaaagctctcgtgttcaagaagttctcaaaggttgtgggaggaaggttgcgtctt
gctgtgtctggtggaggacccctcaacgctgatgtgcaaggattcatcagtacttgcttc
ggatgtccactaggacaaggatacggcttgacagaaacctgtgctggattgactcttcag
gacttggcagatgatcgtgttggtattgctggtgtcccaatcccttgtgttgaagtgaag
cttgtatcgtgtcccgaaatcaacgacaaagctgggttgccatacctcacttctgatcgc
aaggatgtcaacggaaagtccgtctttggccgcggagagatttgggtgaagggtgcaaat
gtcggccttggttactacatgatggctgaaaagagtaaagaggactttgacgaagacggt
ttcttccacactggcgacattggtcagtttgctgatgatggaagtgttcaaattgtcgat
cgtaagaagaacttgatcaagctcaagggtggagaatatattgccgttgagaacatggaa
atgacgtacggaaactgcagcttcgtggatgccgttgctggtggtatctgctgttacgga
gacggtgatatggatcgtcctattgccatcatgcagctcaaccatgtcgttgtaatgaac
tgggccaaggacaatggcgtcgctggagactttgacaaagtgaaagactcgaaggagctt
tatgacgcagtgatgcaggagatggagcaggaacagaagaaggctggtttgagccacatt
gaaaagttgattgcaattgcgttcgtcactgatccgtggactcctgagaacggatgtctt
actgcggcaaacaagttgcaacgtagggctgtcgtt
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