Thalassiosira pseudonana: THAPSDRAFT_15123
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Entry
THAPSDRAFT_15123 CDS
T01078
Name
(RefSeq) predicted protein
KO
K11839
ubiquitin carboxyl-terminal hydrolase 8 [EC:
3.4.19.12
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
THAPSDRAFT_15123
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tps01002
]
THAPSDRAFT_15123
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_15123
04121 Ubiquitin system [BR:
tps04121
]
THAPSDRAFT_15123
Enzymes [BR:
tps01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
THAPSDRAFT_15123
Peptidases and inhibitors [BR:
tps01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
THAPSDRAFT_15123
Membrane trafficking [BR:
tps04131
]
Endosome - Lysosome transport
Others
Others
THAPSDRAFT_15123
Ubiquitin system [BR:
tps04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
THAPSDRAFT_15123
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
RUBY_RBDX
Motif
Other DBs
NCBI-GeneID:
7451298
NCBI-ProteinID:
XP_002288443
JGI:
15123
UniProt:
B8BYF3
LinkDB
All DBs
Position
3:<1498572..>1501610
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AA seq
341 aa
AA seq
DB search
GACGLINLGNTCYANSGIQCLSYLPLLRSYLLSGQFKGDLNRDNPLGTGGKLLEEFAELM
QVMWSGKYGVRAPQKFRSFLGKCRPQYSGADQQDAQELINDMIDMLHEDGNRVKKKPYVE
ALEDKFIEKTDLPRVGQEAWRRFLRRNRSAVSDLSMGQVYNSVTCPVCNHSSKNFDPFNM
LSLPFPTVAEVIFQCTVVRRATEQRLDAVDCWRCPVCKVDREGKQSMALWNLPDLLTFHL
KRFNASSRWREKISTKVDFPLTGLNMREWCDKESPLLEEETTPTGWRLGRNKEKDSSSTA
ASKGVAKSAEPLWLQFDDDLVEPLPPRNVVSETAYVLFYRR
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
ggtgcatgcggtttgatcaatcttggcaatacatgctacgccaactctggaattcagtgc
ttgtcgtacttgccacttctccgatcgtatttgctgagtggccagttcaagggagatctg
aatagagacaatcctttgggcactggtggcaagttactggaggagtttgccgaactaatg
caggtcatgtggagtggcaaatatggagtccgtgcacctcaaaagtttcgtagctttctt
gggaaatgccgaccgcaatactctggagcggatcagcaggatgcgcaggagttgatcaac
gacatgattgatatgcttcatgaagatggtaaccgagtgaagaagaagccatacgttgaa
gcattggaagacaaattcattgaaaagacggatctccctagagttggccaagaggcgtgg
cgacgatttctacggagaaacagatcagctgtttcagatctatccatgggtcaggtctac
aacagtgtcacttgcccggtgtgcaaccactccagcaagaactttgatccattcaacatg
ctttcgttgccttttccaacagtggcagaggtcattttccaatgcactgttgtcagaaga
gcaaccgaacaacgcttggatgccgtggactgttggcgttgtccggtgtgcaaggtggat
agagaaggcaagcaaagtatggcactttggaaccttcccgatctcttgactttccacttg
aaacgatttaatgcatcttcgaggtggagggaaaagatcagcaccaaagtggatttcccg
ttgactgggctgaacatgcgagagtggtgtgataaggaatctccgttgttggaggaggaa
acaacaccgactggatggagacttggacggaacaaggagaaggactcatcgtcaactgcc
gcttccaagggagttgcaaaatctgctgaaccgctttggttgcaatttgacgatgatctt
gtggaaccattgcctccgcgaaatgtagtgtctgaaaccgcatatgtcttgttctacaga
agg
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integrated database retrieval system
