Thalassiosira pseudonana: THAPSDRAFT_15142
Help
Entry
THAPSDRAFT_15142 CDS
T01078
Name
(RefSeq) predicted protein
KO
K02257
heme o synthase [EC:
2.5.1.141
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00190
Oxidative phosphorylation
tps00860
Porphyrin metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
THAPSDRAFT_15142
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
THAPSDRAFT_15142
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tps01006
]
THAPSDRAFT_15142
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
tps03029
]
THAPSDRAFT_15142
Enzymes [BR:
tps01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.141 heme o synthase
THAPSDRAFT_15142
Prenyltransferases [BR:
tps01006
]
Compound prenylation
Protoheme farnesyltransferase
THAPSDRAFT_15142
Mitochondrial biogenesis [BR:
tps03029
]
Mitochondrial quality control factors
Mitochondrial respiratory chain complex assembly factors
Complex-IV assembly factors
THAPSDRAFT_15142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiA
NADH5_C
Motif
Other DBs
NCBI-GeneID:
7442783
NCBI-ProteinID:
XP_002291607
JGI:
15142
UniProt:
B8C4F6
LinkDB
All DBs
Position
6:complement(1685471..1686307)
Genome browser
AA seq
279 aa
AA seq
DB search
ELSKARLSALVVSTTAFGFLSAGPTTALAVSSLPTFLAASVGTALCASSAATFNQVLEVE
RDGRMKRTGNRPLVKGVVGESAAVTLGCVTGATGGLMLGLGTDPMTTVLGLGNIGLYAGL
YTYLKPRSEWNTWVGAVVGAIPPVMGWTAAGGSPLDAEAILLGSTLFLWQFPHFFALNWM
YRTDYKRGGFAMVAVNDPSGDRTASLIKRYGVYLASLPFLSTAMEVTSPMFAVEGIILNA
YALHVANNFDKERSNANARKVFLTSLWYLPCVMMLFLLH
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
gaactatccaaagcccgtctctccgccctagtagtctccacaaccgcctttggctttctc
tccgccggtcctaccaccgctctcgcagtatcctccctcccaacattcctcgccgcctcc
gtcggtaccgctctgtgtgccagttcggcagcgacgtttaatcaagtgttggaggtggag
agagacgggaggatgaagaggacggggaatcgaccgttggtgaagggtgtggttggggag
agtgcggctgtgacgttgggatgtgttactggggctacgggtggtttaatgttgggattg
ggtaccgatccgatgactacggtgttgggacttgggaacattggactgtatgctgggttg
tatacatatttgaagccacgatcggagtggaatacgtgggtgggagctgtagttggggct
attcctccggtgatggggtggacggctgcggggggttctcccttggatgcggaggcgata
ttgttgggatcaacgttgttcttgtggcagtttccacacttctttgcgttgaattggatg
tatagaactgattacaaacggggtggatttgcaatggttgcagtgaatgatccgagtgga
gatcgcactgcttctcttatcaagcggtatggagtatatctggcctcgcttccgtttctg
agcacggcaatggaggtgacatctccgatgtttgcagtggaaggaatcatattgaatgca
tatgcacttcatgtagcaaacaactttgataaggagaggagcaatgcaaacgcacgaaag
gtgtttttgacaagcctgtggtatttgccttgtgtcatgatgctgtttttgttgcat
DBGET
integrated database retrieval system