KEGG   Thalassiosira pseudonana: THAPSDRAFT_15887
Entry
THAPSDRAFT_15887  CDS       T01078                                 
Name
(RefSeq) cdc2/cdc28 protein kinase
  KO
K02202  cyclin-dependent kinase 7 [EC:2.7.11.22 2.7.11.23]
Organism
tps  Thalassiosira pseudonana
Pathway
tps03022  Basal transcription factors
tps03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    THAPSDRAFT_15887
  09124 Replication and repair
   03420 Nucleotide excision repair
    THAPSDRAFT_15887
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:tps01001]
    THAPSDRAFT_15887
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tps03021]
    THAPSDRAFT_15887
   03019 Messenger RNA biogenesis [BR:tps03019]
    THAPSDRAFT_15887
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_15887
Enzymes [BR:tps01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     THAPSDRAFT_15887
    2.7.11.23  [RNA-polymerase]-subunit kinase
     THAPSDRAFT_15887
Protein kinases [BR:tps01001]
 Serine/threonine kinases: CMGC group
  CDK family
   THAPSDRAFT_15887
Transcription machinery [BR:tps03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     THAPSDRAFT_15887
Messenger RNA biogenesis [BR:tps03019]
 Eukaryotic type
  mRNA processing factors
   5' end processing
    Capping factors
     THAPSDRAFT_15887
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     THAPSDRAFT_15887
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Kinase-like APH Haspin_kinase ABC1
Other DBs
NCBI-GeneID: 7443066
NCBI-ProteinID: XP_002287930
JGI: 15887
UniProt: B8BUZ9
LinkDB
Position
2:complement(1526642..1527514)
AA seq 291 aa
MDNYEVIKALGQGTWGVVHMAKQRGTDRIVALKKIKSERPEEGVNFTAIREIKLLREFKH
ENIIELVDVFTTSDMAVCLVYECADTDLEKILKNRAISISLADTKQHLLTLLRAISACHD
RWILHRDLKPDNCLFLKDGTMKLADFGLARMYGTPKTRLSPQAITLWYKPPELLLGASEY
SSAADIWSVGCIFAELLLRRPFLQGNQSDVSQLDTIFQVFGTPTETNWPDHNTLPLCTRG
LEWDNCPPIPFDEIFTAAPQDCLSLLRSMLVLDPNKRITANAALLHPYFSN
NT seq 873 nt   +upstreamnt  +downstreamnt
atggacaactacgaagtaataaaggcgttaggccaaggaacatggggagtagtccacatg
gcaaagcagcgaggaaccgaccgcatcgtcgccctcaaaaagatcaagtctgaacgtccc
gaagagggcgtcaactttacagcaatccgagagatcaaactccttcgtgaattcaaacac
gagaacatcatcgagttggtggatgtgtttactacctcggatatggctgtgtgtttggta
tacgagtgtgctgatacggatttggagaaaattttgaagaatagagccatatccatctcc
ttggcggacacgaagcaacatctcttgactctgttacgtgctatttcggcttgccatgat
cgatggatactgcatcgtgatctaaagccagacaattgtctctttttgaaggatgggaca
atgaagctggctgattttgggttggctaggatgtatggcacaccaaaaacgcgactctcc
ccacaagccatcacgttgtggtacaagccaccggaactgttgttgggggcgtcagagtac
tcttcagcagcagacatttggagcgttggctgcatctttgctgaactgctcttaagaaga
cctttcttgcaggggaatcaaagtgacgtgagccaacttgatacaatctttcaagtgttc
ggaacaccaacagaaacaaactggccagatcacaacacgttaccactatgcacgagggga
cttgagtgggataactgtcctcccattccgtttgatgagatatttacagctgcaccacag
gattgcctatctctgttgcgatctatgttggtgttggatccaaacaaacggatcaccgca
aatgccgcacttctccacccatacttctccaac

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