KEGG   Thalassiosira pseudonana: THAPSDRAFT_15972
Entry
THAPSDRAFT_15972  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K12831  splicing factor 3B subunit 4
Organism
tps  Thalassiosira pseudonana
Pathway
tps03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    THAPSDRAFT_15972
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tps03041]
    THAPSDRAFT_15972
Spliceosome [BR:tps03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    THAPSDRAFT_15972
 Complex B
    THAPSDRAFT_15972
 Complex C
   U2 SnRNP specific factors
    THAPSDRAFT_15972
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5
Other DBs
NCBI-GeneID: 7446658
NCBI-ProteinID: XP_002287396
JGI: 15972
UniProt: B8BUY2
LinkDB
Position
2:1478575..1479880
AA seq 305 aa
RNQEATCYVGNLDPSVTEDILVELFTQIGRVSSVHMPKDKITGLHSGYGFVEFLDVTDAD
YAIQIMSMVKLFSRPLRVNKSSLDKKTGVGSLDVGANLFIGNLDPADVDEKLLYDTFSAF
GTIIRPPKIMRDDMTNQSKGFGFVSFDAFEASDLAIECMHNQYLGNRQITVQYAFKKGTT
SSGGGENGDMVAEGGKGPGGMPERHGSRAERMLAAANPHREFLSTRTGLGGSGVQKVPNT
MFATSAARGNLQMPPPPPVPMPPPLPPQMMGMGMHMPPPPPSLPQQPMMMMQGMMPPPPP
PPPPP
NT seq 915 nt   +upstreamnt  +downstreamnt
cgcaaccaagaagcaacatgctacgtcggcaatctcgacccctccgtcaccgaagacatt
ctcgtcgagctcttcacccaaatcggacgcgtctcctccgtccacatgcccaaagacaaa
ataacaggcctccacagtggatacggcttcgtcgagtttttagatgtgacggatgcagat
tatgccattcagattatgagcatggtgaaattatttagtagaccgctgagggtgaataag
agcagtttggataaaaagacgggagtgggttcgttggacgtgggggctaatttgttcatt
gggaatttggatccggccgatgtggatgagaagttgttgtatgataccttctcggcgttt
gggacaatcattcgtcctcccaagattatgagggatgacatgactaaccagagtaaggga
tttggatttgtgagctttgatgctttcgaggcgagtgatttggctattgaatgcatgcac
aatcagtatttggggaaccggcagattacggttcagtatgcattcaagaagggaactaca
tcatcgggagggggagagaacggagatatggttgcagaaggagggaagggaccggggggt
atgcctgagagacatggaagtagggctgaacggatgcttgcggctgcgaatcctcatcgt
gaattcttatcaacgaggactggattgggcggatctggtgtgcagaaggtgcctaataca
atgtttgctacttcggctgctcgtggcaacttgcaaatgcctcctccacctccagttccg
atgccaccgcctttaccaccacaaatgatgggaatggggatgcatatgcctccgccccct
ccttcattgcctcaacaacccatgatgatgatgcaaggaatgatgccgccgccgccacca
cctcctccgcctcca

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