Thalassiosira pseudonana: THAPSDRAFT_16679
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Entry
THAPSDRAFT_16679 CDS
T01078
Name
(RefSeq) predicted protein
KO
K12735
peptidyl-prolyl cis-trans isomerase-like 4 [EC:
5.2.1.8
]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tps03041
]
THAPSDRAFT_16679
03110 Chaperones and folding catalysts [BR:
tps03110
]
THAPSDRAFT_16679
Enzymes [BR:
tps01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
THAPSDRAFT_16679
Spliceosome [BR:
tps03041
]
Complex C
Other components
PPlases
THAPSDRAFT_16679
Chaperones and folding catalysts [BR:
tps03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
THAPSDRAFT_16679
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
RRM_1
CPSF100_C
Motif
Other DBs
NCBI-GeneID:
7452296
NCBI-ProteinID:
XP_002287451
JGI:
16679
UniProt:
B8BV91
LinkDB
All DBs
Position
2:1759666..1760957
Genome browser
AA seq
309 aa
AA seq
DB search
MSILLETTFGDIVLDLDVEGSPALSRNILKLTKARYYTNTLIYNVVPGRYCQMGGDTQTS
SNAPPDVSQSQRRFLQSHGRFLSPNELQQKGLVIAMEMENIPHTIGSQFLITLKDNAATR
KGHAKYLSLGTVAEDSQDVLSKLNRAYCDDDGRPFADIRIQRALVLHDPFDDPEADDTTL
FPNVEEQSDEDEDEETKQKRLELQQKQEEEWKKKQDNSRAVMLEMLGDLPSAEIKAPENV
LFVCKLNPFTNDEDLELIFSRFDQNAKAEIIRDPDTGSSLQYAFVEFTSNEACNEAYLKM
NNALVDDRR
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgtccatcctcctcgaaacaacctttggagatatcgtcctcgatttggacgttgagggg
tctcccgctttatcccggaatatactgaaattgaccaaggcacggtattacaccaacact
ttgatttacaatgtcgtgcctggtagatattgccagatgggcggtgacacacaaacgtct
tccaacgcaccccccgacgtgtcacagagccaacgacgcttccttcagagtcacggtcgc
ttcttgtctcccaatgaattacaacaaaagggtctggtgattgcaatggagatggaaaac
attcctcatacaattggatctcagttcttgattacactgaaagacaatgcagcgacaagg
aaggggcatgcaaagtacctctctttgggaactgtagcggaagattcacaggatgtatta
tcaaagttgaatagggcgtattgcgacgatgacggtagaccgtttgcggacattcgtatc
cagagagcgttggtacttcatgatccgtttgatgatccggaggctgatgatacgacacta
tttccaaacgttgaggaacaatcggacgaagatgaagacgaggagacaaaacaaaagcgt
ttggagttgcaacagaagcaagaagaggagtggaaaaaaaaacaagacaacagtagagca
gtcatgcttgaaatgttgggggatctgccatcggcagaaataaaagcaccagagaacgtg
ctattcgtatgcaaactcaacccatttacaaacgatgaggatttggaactaatcttctct
cgctttgatcaaaacgccaaggctgaaatcattagagatccagacacaggatctagtctt
caatatgcattcgtggagttcacaagtaacgaggcctgtaatgaggcgtatctgaagatg
aacaatgctctcgtggacgatagacgg
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