Thalassiosira pseudonana: THAPSDRAFT_17110
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Entry
THAPSDRAFT_17110 CDS
T01078
Name
(RefSeq) predicted protein
KO
K19828
mitochondrial GTPase 1
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_17110
03029 Mitochondrial biogenesis [BR:
tps03029
]
THAPSDRAFT_17110
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
Other ribosome biogenesis factors
THAPSDRAFT_17110
Mitochondrial biogenesis [BR:
tps03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
THAPSDRAFT_17110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
GTP_EFTU
RsgA_GTPase
Dynamin_N
MeaB
Roc
Motif
Other DBs
NCBI-GeneID:
7449160
NCBI-ProteinID:
XP_002286913
JGI:
17110
UniProt:
B8BRK0
LinkDB
All DBs
Position
1:complement(<2086627..>2087841)
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AA seq
287 aa
AA seq
DB search
PKVNWYPGHIAKAERQLSETLKSVDVVIEVRDSRAPKATAHPSVGKWTAGRPRVVVLTRM
DTVTSRSRDSWREAYERLGADRWEDSLVEEILFVDAKRGQGTHAISRAVYKAGRHVNERR
KRRGLNDRPLRVGIIGFPNVGKSALINRLLGKKRARTANTPGITRSLQWIRSGFELLDSP
GIIPSDMLDQSDALLLAACNSIGVGAYDNQAVAAYLCERIQSLVIMEKDYIAAPLWRNRC
IERYGFDPLDMLFIVADNTCKGDPENAARKILQDFRMGRMGPISLQL
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
ccaaaagtcaattggtacccaggacacatcgccaaagccgagcgtcaactctccgaaaca
ctcaaatcagtcgatgtcgtcattgaagttcgcgattctcgtgctccaaaggctacggct
catccgagcgtggggaagtggaccgccggacgtcctcgtgtggtggtgctaacgaggatg
gacacggtgacatcgagaagtcgtgatagttggagggaggcctatgagaggttgggagcg
gatagatgggaggatagtttggttgaggagatattgtttgtggatgccaagcgaggccaa
ggtactcatgccatttctagagcagtttacaaagctggacgacacgtcaacgagagaagg
aagcgacgtggtttgaacgataggccgttgagagttggcatcattggatttccaaacgtt
ggaaagtctgcactaatcaatcgtctcttgggaaagaaacgagctcgcactgccaacaca
cccgggataacacgttctcttcaatggatccgtagtggttttgaattattggattctcct
ggtatcattccgtcggatatgcttgatcaaagtgatgcattgcttttggcagcttgtaat
agcattggagtaggtgcatacgacaaccaggccgtggctgcctatctttgcgaacgtatt
cagtctctagtcattatggaaaaggactacatcgctgctcctctctggagaaacagatgc
atagagcgatatggatttgaccctcttgatatgctcttcatcgtcgctgataatacatgt
aaaggcgatcccgaaaatgccgcgaggaagattttgcaggactttcgtatggggcgtatg
ggacctatatcgttacaatta
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