Thalassiosira pseudonana: THAPSDRAFT_20570
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Entry
THAPSDRAFT_20570 CDS
T01078
Name
(RefSeq) predicted protein
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tps03041
]
THAPSDRAFT_20570
Spliceosome [BR:
tps03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
THAPSDRAFT_20570
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Bfr1
Motif
Other DBs
NCBI-GeneID:
7442886
NCBI-ProteinID:
XP_002285943
JGI:
20570
UniProt:
B8BSQ6
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All DBs
Position
1:<76000..77618
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AA seq
340 aa
AA seq
DB search
MSRINRRLTSIGVQVDGDFIVGSVSSPTHQSTLSPFVSLLQTSHAYHQQYQINAHQYKQS
NFFAALDDSGDEGKGKNAPVATKKSASKPAPASKEIVEPSKVQNRPNKGDRNTKGGRGGR
APARDGKRTFDRHSGTGRGKEIKKEGGGGHNWGSDKNDAKKAEGPVTEGEEEAQEGKVAV
AEEEEEEEAPEPEPEDKTISYEEYMATKARPDSAAFAPVAERAVDDEFGGKGSFKKEETD
FLVMGGGKQLKKKGQKKNEKETLVLDFKVKSAISGDDRGPRRDGRRDGRDGGRREGNRGG
GGGRDGRRNDGRRDRPGGRGGGRGGGRGLDATDPNSFPSL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgaatcaatcgtcggctgacgtctatcggtgttcaagttgatggcgacttcatt
gttggttctgtttcttcacccacccatcagtcaactctctcaccctttgtttcacttttg
caaacctcacatgcataccatcaacaataccaaatcaacgcacatcaatacaaacagtcg
aactttttcgctgcactcgatgactccggagacgaaggcaagggaaagaacgctcccgtc
gccaccaagaagagcgcctccaagcctgctcctgcctcgaaggagatcgtggaaccttcc
aaggtgcagaatcgtcccaacaagggagatcgcaacaccaaaggtggacgcggaggtcgt
gcccccgcccgtgacggaaaacgcaccttcgatcgtcattccggaactggccgtggaaag
gaaatcaagaaggaaggtggaggaggccacaactggggctccgacaagaacgatgccaag
aaggctgagggtcccgtgaccgagggtgaggaggaggcccaggaaggaaaggttgctgtt
gccgaggaagaggaggaggaagaagctcccgaacctgagcccgaggacaagactatttcg
tacgaggagtacatggcgaccaaagctcgacccgactctgcggcattcgcacccgttgct
gaacgtgccgtcgacgatgagtttggcggaaagggttccttcaaaaaggaggagactgac
ttccttgtcatgggaggtggtaagcagttgaagaagaagggacagaagaagaatgagaag
gagacgcttgtccttgactttaaggtcaagagtgccattagcggtgacgaccgaggacct
cgtcgggatggacgtcgtgatggtcgtgatggaggacgtcgtgaaggaaaccgtggaggt
ggaggaggcagggacggaaggcgcaacgacggacgacgtgacaggcccggtggacgtggt
ggtggacgcggaggtggaaggggattggacgctactgatcccaattccttcccatcgctt
taa
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