Thalassiosira pseudonana: THAPSDRAFT_20580
Help
Entry
THAPSDRAFT_20580 CDS
T01078
Name
(RefSeq) predicted protein
KO
K11788
phosphoribosylamine--glycine ligase / phosphoribosylformylglycinamidine cyclo-ligase [EC:
6.3.4.13
6.3.3.1
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00230
Purine metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
THAPSDRAFT_20580
Enzymes [BR:
tps01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.3 Cyclo-ligases
6.3.3.1 phosphoribosylformylglycinamidine cyclo-ligase
THAPSDRAFT_20580
6.3.4 Other carbon-nitrogen ligases
6.3.4.13 phosphoribosylamine---glycine ligase
THAPSDRAFT_20580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GARS_A
Formyl_trans_N
AIRS_C
GARS_N
GARS_C
AIRS
CPSase_L_D2
ATP-grasp
Motif
Other DBs
NCBI-GeneID:
7449116
NCBI-ProteinID:
XP_002285953
JGI:
20580
UniProt:
B8BSS2
LinkDB
All DBs
Position
1:129181..133151
Genome browser
AA seq
1149 aa
AA seq
DB search
MGEFPDADIVLVGFGGTAPSPTIHPIRSQNVEYELLKAPHRVFLNNSNSSSSSGDAATTR
KGKKLIIYNLPTSLTEYLSPSCLEEANTIRSRLFLSSNSSSEEVVLTFDSTQGLFLGVDD
ASSILSGDASAASSSSAATLTAISKLDASASSQLNTASPTHKADTVLLVGSGGREHALAV
SLAQSPLVAKVIVCPGNGGTYSESSSKIVNATNEDGSPITDQSNETIVALVKRLGVDMVV
VGPEQPLVDGVVDVLGVECEGVRVFGPSRAGAELEASKAFTKDFLQQHDIPTAKYRNFTS
ADEAIAYVQSLDPTDRQVVKASGLAAGKGVLLPTTPAETIDAVREIMSDKAFGTAGDTCV
IESFMTGPEASCLAFCDGKTAVLMPAAQDHKRALDNDEGLNTGGMGAYAPAPCVTPELHK
VIEGMCIKTVEKMAERGTPYVGVLYAGMMLTPNGPSVLEFNCRFGDPETQVVLPLLETDL
YEVMCACCDGKLDSVDVRFKENVSAATVVCAAKGYPEAYAKGMAIQGLEEANAIENVKVY
HAGTKVDDAQITRCSGGRVLAVTGMGSNLTEALASSYKAVKSITFADSNGDNLMHYRTDI
AKGAIRKKLRIGVLGSTRGTALIPVMEACANGSLHAEIVAVVSNRSSALILEKGKSLGPT
VTTKFVSSKDLSREQFDAECTSVLAGAGVEYVLLVGYMRILSKQFTDYWAGRCINVHPSL
LPKHAGGMDLAVHQAVIDANETESGCAIHEVTEEVDGGPVVVQKVVKVEQGETAESLKEK
VQALEGVAFIEAIQKKCKTTVSYADAGVSIDAGNSLVELIKPACKATRRPGCDADLGGFG
GLFDLAAAGYKAEETIIIGATDGVGTKLRVAHMTKKHETVGIDLVAMCVNDLIVAGGEPL
FFLDYFATGKLDIEEAASVVRGIAEGCRQSGCGLIGGETAEMPSMYAPGDYDLAGFSVGA
VHKDKVLPKNVGAGNVLLGLPSSGVHSNGFSLVRKLVEKANLDYDSSCPWDKNAGTVGDS
LLTPTKLYVKCCLPLLKNEMLTGLAHITGGGLLENLPRSLPSSTKAEITGHPPLPNVFSW
MKQISGLDDHEMLRTFNCGIGMVLIVKKECVDEAKELLREAGESVIYDLGVLTERQGDEE
QVEMKCTLA
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgggagagtttccagacgcagatatcgtccttgtagggtttggtggaacggctccatct
ccaacaatccatccaatccgatctcaaaatgtcgagtacgaattgctcaaggcacctcat
cgcgtctttctcaacaacagcaacagcagcagcagcagtggtgacgctgctacgacgagg
aagggaaagaagcttatcatctacaatctcccaacttcactcactgaatatctctctcca
tcgtgtctggaggaggccaacaccattcgctctcgtttgttcttgagtagcaactcgtct
tcagaggaggttgtcttgacgtttgattctactcaaggattgttcttgggagtggatgat
gcctcgtctattctctctggagatgcctccgctgcatcctcctcctcagcggcaaccctc
acggcaatctccaaactagacgcctccgcctcctcccaactcaacaccgcatcacccacc
cacaaagcagacaccgttctcctcgtcggaagtggaggtcgcgaacacgccctcgccgta
tcattggctcaatctcctctcgtggctaaagttattgtctgccctggaaatggaggaaca
tattccgaaagctcatctaaaattgtcaatgctacgaatgaggatggaagtcctattacg
gatcaatccaatgagactattgtggcgttggtgaaacgtttgggagtggatatggtggtg
gttggaccggagcagccgttggtggatggagtggtggatgttctgggtgtggagtgtgag
ggggtgagggtttttgggccgagtagggctggggctgagttggaggctagcaaggccttc
accaaagactttctccaacaacacgacatccccacggccaagtaccgtaacttcacctct
gctgacgaagccattgcctacgtccaatcactcgaccccaccgatcgccaagtcgtcaaa
gcctctggtctcgccgcaggaaagggggtgcttctccccaccactcccgctgaaactatc
gatgccgttcgtgaaatcatgtcggataaggcttttggtactgctggtgacacttgtgtt
attgaatctttcatgactggtcctgaagcttcctgtcttgccttttgcgacggaaagacg
gcagtgttgatgccagcggcgcaggatcacaaacgtgcattagacaatgatgagggattg
aatacaggaggtatgggtgcatatgctcctgctccttgtgtgacgccggagttgcataag
gtgattgaggggatgtgtatcaagacggtggagaaaatggcagagaggggcactccgtat
gttggtgttttgtatgcgggcatgatgcttactccaaacgggccgtctgtgcttgagttc
aactgtcgttttggtgacccagaaactcaggtggtacttcctcttcttgaaacggatctt
tacgaggtaatgtgtgcctgctgtgatggaaagttggactccgttgacgttcgtttcaaa
gagaatgtctcagctgctaccgtcgtatgtgctgccaagggttatcccgaggcttatgct
aaaggaatggcgattcaaggattggaggaagctaatgctatcgagaatgtcaaagtatac
catgctggaactaaagttgacgatgcccaaatcactcgttgttctggtggacgtgttctc
gcagtgacgggcatgggatccaacctcacggaagcactcgcttcatcgtacaaagccgtg
aagagcattacttttgcggattccaacggagacaacctcatgcattatcgcacggacatt
gccaagggagcaattaggaagaagttgcgtattggagtattgggatctactcgtggaacc
gctttgattcctgtcatggaggcttgtgccaatggatctctacatgccgagattgtggca
gtggtgagcaatcgtagctcggcgttgattttggagaagggaaagagccttggacctact
gtgactaccaagtttgtgtcgtccaaggacttgtctcgggagcagtttgatgctgagtgc
acgtccgtgttggctggagctggagtagaatacgtcttgttggttggatatatgaggatt
ttgtcgaagcagttcacagattactgggctggaagatgtatcaatgtgcacccttccttg
cttccaaagcatgctggtggtatggatttggcagtgcatcaagcagtcattgacgccaat
gaaactgaaagcgggtgtgccatccatgaagtaacggaggaagttgacggaggacctgtt
gtcgttcagaaggttgtcaaggtggagcaaggagaaactgctgaatcattgaaagaaaaa
gtacaggctctcgagggcgttgcatttattgaggcgattcagaagaagtgcaaaactacc
gtgagctacgctgatgctggcgtgagcattgatgcaggcaactcgttggtcgaacttatc
aaaccagcttgcaaggctactcgtcgaccaggatgtgatgctgatcttggtgggtttggt
ggactcttcgatttggcagcagctggttacaaggccgaggagaccatcatcattggtgca
actgacggtgtgggtaccaagcttcgcgttgctcacatgacaaagaagcatgagactgtt
ggtattgacttggttgcaatgtgtgtcaacgatctcatcgttgctggaggagaacctttg
ttcttccttgattactttgcaactggaaagctcgacattgaagaagccgcttctgttgtc
aggggaattgccgaaggatgcaggcagtctggatgtggattgattggtggtgagacggca
gagatgccatccatgtatgctcccggagattacgacctagctggattcagtgttggtgca
gtccacaaggacaaggtgctgccaaagaatgttggtgctggaaatgtgcttcttggactt
cccagtagtggagtgcacagcaatggcttcagtttggtcaggaagcttgtggagaaggcc
aacttggactatgactcgtcgtgtccttgggacaagaatgctggtaccgtcggagattca
ctcttgactccgacaaagctttacgtcaagtgctgccttcctctgctcaagaacgagatg
ttgactggactcgcccacattactggaggtggtcttcttgagaatttaccccgaagtctt
ccgtcaagcacaaaggcggagatcactggccacccacctctccctaatgtgtttagctgg
atgaagcaaatcagtggcttggatgaccatgaaatgctccgaaccttcaactgtggtatt
ggaatggtactcatcgtgaagaaggaatgtgtcgacgaagctaaggagttgttgcgtgag
gcgggagagagtgtgatttacgatttgggggtgctaacggaaagacagggagacgaagaa
caggtcgagatgaagtgcactctcgcttga
DBGET
integrated database retrieval system