Thalassiosira pseudonana: THAPSDRAFT_20637
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Entry
THAPSDRAFT_20637 CDS
T01078
Name
(RefSeq) predicted protein
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
tps
Thalassiosira pseudonana
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Pyruv_OxRed_insertion
GDH_HM2
Motif
Other DBs
NCBI-GeneID:
7449144
NCBI-ProteinID:
XP_002286605
JGI:
20637
UniProt:
B8BT62
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Position
1:complement(508058..511577)
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AA seq
939 aa
AA seq
DB search
MSNIPMSTPPPVLPNRGTAKVKSVLSGDTVVLLGRAGEGKKAPEVTFTFERVTAPRMASK
ANNNVDDPGAFSSREWLRNMCVGKTVTFETRKQGATAGDRVYGLLFMPNPTNKSSEWNLS
VESVRRGFCTPKILGGDADDANDDGDTVEDYEKALQSAYKEAVSVRSGVHADKPLVRKIM
NAGEEFEAMTLVEKAKRLCTNGSVNCVIEYVFDGSRYRCIVTDPELESVGLLYGSFTLLL
AGVSCPRVGNPRLNPPTPSEPFAVEARNFVELRLLQRELKITLHGTDKSGVCLVGTVHHP
RGSIGAEVLKNGLGRISDWTIRMMSPGDVPPLRIAENAAKRANIGVFESYAPPTLTGASE
FVGTVVEVLTGDTLLILPNGETYDDESKLKKISLASIRAPRAGNERTGKPDEPYATECKD
RLRVLTVGKPVKVNIHYEKEIPMGANQTEKRQFGTVSVGKREDVGEVLIAESLATTQRHR
DDDEKSIRYDDLVAAESIAKAAKKGIHSEAEYKKKTVNDLSDPKKAKTYASTLERAGMTK
AIVDYCFNGSRFKLFVPSENCYIVFALSNIRCPQPSPNQGALSRGQAKAAEPFGDNSKRH
SRLNVLQRSVEIYCNGVTNGGVMTGDLFVGSGAQRRDFGIELVASGLATVDQRKIDYGEA
PKALVDTQTAAQSNKLGIWSVKQVTKNEPKTKSYDKAEERAVDIQISEISNGNSFFFRVV
GDESAKVIDDSMKIFTETNGTAAAPCEVKPGKVVAALFNDGSSNSWYRAKILEKTANGKA
KVLFVDHGNVATVSPATHLRPLDMSLATESIPAVAKEAQLALIKVRPLDEDDGLDAARMF
QGAAWGKDLKARLHGETDGKVVVTLYEGDVDAPSINENLTAAGLARIGKKYEMYDLLDRM
GNSDSLGKLVKDLQAAQESARTSRKGMWIYGEIPEEDEE
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaacattcccatgtctaccccaccccctgtccttcctaaccgtggaacggccaag
gtcaagtccgtccttagtggagataccgtcgtccttcttggacgtgctggcgagggaaag
aaggctcctgaggttacctttacctttgagagggtgactgcccctaggatggcatccaaa
gcaaacaataacgttgatgatcctggcgctttctcttctcgtgaatggcttagaaatatg
tgtgttggcaagactgttaccttcgaaactcgtaaacaaggagccaccgcaggagatcga
gtctatggtcttctcttcatgcccaaccccaccaacaagtcctccgagtggaacctctcc
gtcgaaagtgtccgtcgcggcttctgtacccccaagatccttggcggagacgccgacgat
gccaacgacgacggagacaccgtagaagactacgaaaaagctttgcaatctgcatacaaa
gaagctgtctccgttcgttcgggtgtccatgctgataagcctcttgttcgtaagattatg
aatgccggtgaagagttcgaggcaatgacacttgtagaaaaggccaagcgactttgcacc
aatggatctgttaattgcgttattgaatacgtttttgatggatctaggtatagatgcatt
gttactgatcccgagttggaatctgttgggttgctctacggatcgttcaccctccttttg
gctggggtgtcttgcccccgtgtgggcaatcctaggttgaaccctcccactcccagtgag
ccatttgccgtggaggcacgtaactttgtggagttgagacttttgcagagggaactcaag
attacgctgcatggcaccgacaagtcgggagtttgtctcgtggggactgtgcatcatccc
aggggaagcattggtgctgaggttctgaaaaatgggcttggaaggatttctgattggaca
atccgaatgatgagtcctggcgacgtccctcctttgcgtattgctgagaatgctgccaag
cgtgccaacattggtgtgtttgagtcgtatgctcctcctacgctcacaggtgcatctgag
tttgtgggtactgtggttgaagttcttactggagataccctgttgattcttcccaacgga
gagacatacgacgatgaatcaaagctcaagaagatttctctagcatccatccgtgctcct
cgtgctggtaacgaacggactggcaagcccgacgagccatacgccaccgagtgcaaagat
cgtttgagggtattaactgtaggaaagccagtaaaggtcaatattcactacgagaaggag
attcctatgggagccaatcaaaccgaaaagcgtcaatttggaaccgtgtccgtcggaaag
cgtgaagacgtcggcgaagtactaattgccgagtcccttgctactactcaacgacaccga
gatgatgacgaaaagtctattcgctatgatgatcttgttgctgctgagagtattgccaag
gcagccaaaaagggtatacactccgaagcagaatacaaaaagaagactgtcaatgatctt
tcggatcccaagaaggccaagacttatgcttctacgctagagcgtgcaggaatgaccaaa
gccattgttgattactgtttcaatggctctcggtttaagctttttgtgccatcagagaat
tgctacatcgtttttgctttgtccaatattcgttgcccccagccttctcctaaccaggga
gccctcagtaggggccaagccaaagcagccgagccatttggtgacaactcgaagcgccat
tctcgtctcaatgtgcttcaacgttcagtagaaatctattgcaatggagttactaacggc
ggtgtcatgactggtgatctctttgtcggttctggagctcagcgtagagactttggtatt
gaacttgtagcttctggacttgcaactgttgatcaacgcaagattgattacggtgaagct
cctaaagccttggttgatactcaaactgcagcccaaagcaacaaattaggaatctggtct
gtgaagcaagttaccaagaacgagccaaagacgaagtcttatgataaagccgaggaacgt
gctgtcgatattcagattagtgagattagcaacggtaatagcttctttttccgcgttgtt
ggagacgaaagtgccaaggtcattgatgatagcatgaagatttttactgagacaaacgga
accgctgcagctccctgcgaagtcaagcctggcaaagttgtggctgctcttttcaacgat
ggatcttccaacagttggtatcgtgccaagattcttgaaaagactgcgaacggaaaagcg
aaggttctgtttgttgatcatggcaacgtcgctactgtatcacctgctactcacttgcgt
cccttggatatgagtcttgccaccgaaagcatccctgccgtggccaaagaggcacagctt
gcgttgatcaaagttcgtcctcttgatgaagatgatggcctagacgctgcacgtatgttc
cagggagccgcttggggcaaagatctcaaggctcgtttgcacggagaaactgacggcaag
gtggttgttactctttacgaaggtgatgttgacgcacccagtatcaacgaaaacttgacc
gccgctggattagctaggatcggaaagaagtatgaaatgtacgacctcttggatcgcatg
ggcaacagtgactctctaggaaagcttgtgaaggatctccaggcggctcaggagtcggct
cgtacctctcgcaagggtatgtggatctatggcgagattcccgaggaagacgaggagtag
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