Thalassiosira pseudonana: THAPSDRAFT_20658
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Entry
THAPSDRAFT_20658 CDS
T01078
Name
(RefSeq) predicted protein
KO
K14840
nucleolar protein 53
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_20658
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
THAPSDRAFT_20658
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop53
K_trans
DUF5777
Motif
Other DBs
NCBI-GeneID:
7453430
NCBI-ProteinID:
XP_002286626
JGI:
20658
UniProt:
B8BPY1
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All DBs
Position
1:complement(638257..639764)
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AA seq
473 aa
AA seq
DB search
MVKRKQGSRAQKRAEETYTEFSSALIDQAEEDRVTSKQDDDLFVLDTDRKDAIGTSARNK
AARRAANREKLLAGVTTTSGSDAKRRKYEPSDKDLRQIQKVLQHHGKDGAIALALRGKAR
MEQKRHAKRMNGMTPKSGKPTYDLWDDAAVASADTTSKKKSKLIAVATGKPSPNGISPVD
IVSATKPLPVDPNFEVLSQQPTKALSNKHLKARKHAQLTAKPTLALEVAHPGQSYRPDKE
QHQDAIGEALSIEIRRNEAEEYKSKPISSGMSEFTKRFIVGESDSEESSDEEEEDNDDGN
VATMGATKLIKKKEKLTRAQRNKQKRVKAEQTALFARKQSKQFNHQINEVHKHSKAVKEE
EKLHSVRQSELAQLRDEKKSQPLGKNLWNAVSQVDPLRAPSLPVALTEELEGKSGGKGSL
RTVTPKGSLVTDRLESMVARGMVSKKKVDGRRIVQGKRRKKVMGVKGTEYLLI
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggtcaaacgaaagcaaggttcaagagcccaaaaacgtgcggaagaaacctacaccgag
ttctcctccgccctcatagaccaagcagaagaagaccgcgtcacctccaaacaagacgat
gaccttttcgtactcgataccgatcgcaaggatgccattggtaccagcgctagaaacaag
gctgcgagacgtgcggcaaacagagaaaagttgttagctggtgttactactaccagtggc
agtgacgccaagaggcgaaagtatgaaccgtccgataaagatttacgtcagatacaaaag
gtgttgcaacatcatggaaaggacggtgccattgctctggctctacgtggcaaagctcgc
atggaacagaagcgtcatgccaaacgaatgaatggtatgactcccaaatctggaaagccc
acgtatgacttgtgggatgatgctgcagttgcatctgctgataccacatcaaagaagaag
agcaagttgattgccgtagccaccggcaaaccatcacccaatggtatatctcccgtagac
atcgtatcagctaccaaacctctccctgttgatccaaactttgaagtactatcccagcaa
ccaaccaaagcactctccaacaagcacctcaaggcacggaaacacgctcaactcactgcc
aaaccaacattggcactggaggtagcacaccccggtcaatcgtaccgtcctgataaggaa
caacaccaagatgcaattggcgaagcgttgtctattgaaattcgtagaaatgaggcagag
gaatacaagtctaagcctattagttcggggatgagtgagtttaccaagaggtttattgtt
ggtgagagtgattcagaggagtctagcgacgaagaggaggaggacaacgacgatggaaac
gtggctactatgggtgctaccaagttgattaagaagaaagagaagctaacacgagctcaa
cgtaacaaacaaaagagagtcaaggcggaacaaactgctctgttcgcacgtaagcaatcc
aaacagttcaaccatcaaatcaacgaggttcataagcactctaaggctgtcaaagaggag
gagaagttgcattccgtacgtcaatcagagttggctcaattgagggatgagaagaagtcg
cagccattggggaagaatctgtggaatgcggtgtctcaagttgatcctttgcgtgctcct
tctcttcctgtggcattgacagaagaactggaaggcaaatcgggaggtaaaggatcactg
agaacggtaacccccaagggatcattggtaacggatcgtttggagagtatggtggcaaga
ggaatggttagcaagaagaaggtggatgggaggaggattgttcagggtaagaggagaaag
aaggttatgggtgtcaaaggtacggagtacttgttgatttag
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