Thalassiosira pseudonana: THAPSDRAFT_20754
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Entry
THAPSDRAFT_20754 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
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GFIT
Other DBs
NCBI-GeneID:
7449147
NCBI-ProteinID:
XP_002286140
JGI:
20754
UniProt:
B8BQG5
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Position
1:1108192..1113178
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AA seq
1591 aa
AA seq
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MKKAKANSIRIGDDTNLPHRQMNNDMKLTALHDMMESDGRARTHQNNDSTHSNGGSSQPM
NIDGNDTSQVSALSIPQMEPSSPSRSAGGGGVASHDRQHDGSPKPTTATAAAQPPSAAAP
TYFINSSNNSSSMHNPLVTFAMPAVVDVIQSSNNTNTNMNCNIKSTHVDGGSGRYGTRSR
SAASQQRRSATGTGSNNVNGNFSGASSGSLSSEDHHHQSDHNRNSIRQGSGTSSSLSSGS
NSNNETTMSSLKKKSTLKHAASTSSSGGEENFTSSSDNLMSSSPNNLNSSNHIINGSGNN
KNPNTMMSSNRVTSASGSNSGTTNSRTSASNSGSSGSGSDGNEGGATSSSNPAVVTASNG
SGNNTNTTSSGSGSDGGSGSGDGNRRSGGEASADYYYAGYGSGSLGQQSDSQNGTSAGTA
MVSSTVAAASAQHSSYAMPNANVATSSGQPGFNNLHRAIAASNNVAHHHQRQHQQAVPNG
GAAGMLPHIVVATDDALSGGLPPPSPAYGSHLRHHSNRHYHHRSRAAPQDAGTNVAPPRP
INLAGMPSVASHQLPPPEGGIYALRLPPADEQDVLQRVPQAQHATVIASNLPPPPMSSDA
WSSSSGGSSSRNSRVYNSKRPAAKSNTLVSGQPPSAASNGTARGSVNTNKTSSTLESMSS
APNAAAVRVSMDDPILKPSMFGSTKKVSLQSPPLQQPLMKSSSSSPDDAKTGAKINIASR
KRKMSTLARGGSASDDSSDSAEAAGSGSEEGYEASSSSNAERQSGSGSSGSDSVSSDDVN
KDNVTNARVSSSSNPKKKSTSMLESQTNSKRTGTSSMSSSVLADFSSVMNEEESLALNSL
SASPRSSCTSLSSKDGGNELEEANKDVAVMNDSKAHSKPQSSGTRKRGSLHLCGTASAKR
AKHETNELKDGGIDVSAPGNAMKSGLSLMEKTLQQKVRSTHHQHYHSRSTGRKMLEESFL
SAKRDLSTSSIPDEAKAATALALESAESSASCGGKQGPLASLAGNTSSSTDRPMKEVSFQ
DTPIYSMGTDVMALVVSFLEVPESHSFLTTPFSRTWLETYTAPQELWKILCTSKPFYAQL
EENSCGSSDVSTCSFPLCNDLEMRHLFGRYRLLYTSFVRCMKYLDRLKDDALSGRTPSSY
TNSNRHELYPYNRNGSLKAYFARARRIVRQNRRNGGSASSSDSGSRLTDSGEEDKKPAAV
ETANSDNSREQVVRPTGPRLGRSMLTDRLLRPTGAGEVDNVNLPWSCAIYSVVNWMVAFA
DVEGIQIMCLKVLPYLLEDESQRTTAQRAGLTDSVLRAMVLFPDSIELHTVAFHTLVLLA
RPLGGNEGMLFHTAMVNTRGIFNEGSSSSKNGIVIMLDSMRRFAQDEILQAMSCWSLVNV
ALTPLQKTMLVKLGGLTVTANAMLQHPYNAEVQFRALFALINLVIPSEVRPEESEEMREI
EREIFQQLGEVGDTSEKEMLDASVGQISNLVVVAMKNFCSSEAILNRACLVLHNLSLNED
YHSILLWTPNCYQMLEWCIGNYPHDHVLQQSAGGTIQRLNSTLSADDELRARFTHSIRAQ
QQHSLEMARREAVYLQEQQEQQEGQQEMDVA
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcaaaagcaaatagcattaggataggcgatgacacgaaccttccccatcgt
caaatgaacaacgacatgaaactaacggccctacacgacatgatggagagtgatggtcgt
gctcgcacccatcagaacaacgacagcacacacagcaatggtggcagcagtcagccgatg
aatatagatggcaatgataccagccaggtgtcggcattgtcaatcccacagatggaaccc
tcgtcgccgtcgcggtcggctgggggtggtggtgtcgcatctcatgatagacaacatgat
ggttcacccaagccaacgacagcgacagcagctgcccaaccaccatcagcagcagcgcca
acatacttcatcaactcctccaacaacagctcttccatgcacaaccccttggtcacattc
gccatgccagctgttgtcgatgtcattcaatcgagtaacaataccaatacgaatatgaac
tgcaatatcaagagtacgcatgtcgatggtgggagtggacggtatggtacacgtagtagg
tcggctgcttctcaacaacgtcgatctgctactggtactggttccaacaacgtcaatggc
aactttagtggagcgagcagtggcagcttgagcagtgaagatcaccatcatcagtctgat
cataatcgcaactccatacgacaaggatcggggacctcgtcgtctctctcatcaggaagc
aactccaacaatgagacgacgatgtcaagtctcaagaagaagtctacattgaaacatgct
gcatcaacttcctcctctggtggagaggaaaattttacttccagctctgacaacctaatg
tccagctctcccaacaatctcaactcaagcaatcacatcatcaacggcagtggtaataac
aagaaccccaacaccatgatgtcatccaaccgtgtcaccagtgcaagtggatccaactct
ggcacaaccaacagtcgaaccagtgcctccaattctggctcttcaggttctggtagcgat
ggcaacgaaggaggagccacttcgtcttctaaccctgcagtagtcactgcatccaatggt
agtgggaacaataccaatactacctcgtctggatcgggaagtgacgggggcagtggtagt
ggtgatgggaataggagaagcggaggagaggctagcgctgactattattatgcgggatat
ggaagtggtagtttgggacagcagtctgactctcagaatggtacaagtgctggtactgca
atggtgtcgtcgactgttgcagcagcttcggctcaacattcatcgtatgcaatgcccaat
gccaacgttgctacttcgtctggtcagcctggattcaataacctccatcgagctatcgct
gcttccaataacgtggcacatcatcatcagcgacaacaccagcaagcagtgcccaatggt
ggagcagctggaatgttaccacatattgtcgtcgccactgatgatgctctgtcaggtgga
ttaccgcctccttctcctgcgtacggttctcatttacgacatcattccaataggcactat
catcaccgtagtcgtgctgcccctcaagacgcaggcactaacgtggctcctcctcgaccg
atcaatctggctggaatgccgtctgtagcttcgcatcaactaccacctccagagggtggt
atctatgcccttcgccttcctcctgcggatgaacaggatgtgcttcaacgagtacctcag
gctcaacatgccactgtgattgcgagtaacttgccacctcctcctatgtcgtcagatgca
tggtcttcatcttctggtggatcatcgtcgcgaaactcgagggtgtacaatagcaaacga
cctgctgccaagagtaatacactggtatcagggcaaccgccttcagctgcatctaatggg
actgctcgtggttctgtcaatacaaacaagacatcgtctactttggaatcgatgagttca
gctcccaatgctgcagctgtacgcgtgagcatggatgatccaattctcaagccatccatg
tttggttccacaaagaaagtctccctccagtcacctccgttgcagcagcctttgatgaag
tcgtcatcaagtagtccggatgatgccaagactggtgccaaaatcaacattgctagtcgc
aaaagaaagatgtctactttggctcgaggtggtagtgcgtcagatgattcttcggatagt
gccgaagccgccggaagcggtagcgaagaaggctacgaagcatcctcgtcatcaaatgca
gagaggcagtctggctcaggatcatctggttcagactcggtgtcttctgatgatgtcaac
aaggataatgttaccaatgctcgtgtatcatcatcgtctaatccaaagaagaagtctacg
agtatgttggagtctcagaccaattccaagaggactgggacgtcgtccatgtcatcatct
gtccttgctgactttagttcagtgatgaacgaagaggaatcgcttgccttgaactccctc
tctgcgtctccaagatcatcgtgcacatcactctcttccaaggacggtggtaacgagttg
gaggaggccaacaaagatgttgctgtcatgaatgattcaaaagctcattccaagcctcaa
tcaagtggcaccagaaagaggggctctctccatctctgtggcactgcttcagccaagaga
gccaagcacgaaactaatgaacttaaggacggtggcattgacgtttcagctcctggcaat
gcgatgaagagtgggttgtctctaatggaaaagactctgcaacagaaagtacgctcgacc
catcatcagcactatcacagccgcagtactggccgaaaaatgctggaggagagcttcttg
tctgccaaacgtgatctatcgacgagttctattcctgatgaagccaaggccgcgactgct
ttggcgttggagtcggcagaatcatctgcttcctgcggtggaaagcaaggaccactagca
tcgttggctggcaatacctccagttcaaccgaccgtccaatgaaggaggtctcgtttcaa
gatacacccatttattcgatgggaactgatgtgatggcactcgttgtatccttcttggaa
gtaccagagagtcattccttcctcactacgccattctccaggacttggctggagacttat
acggctcctcaagagttgtggaagatattgtgcacgtccaagccattttacgctcagctt
gaggagaactcctgcggaagtagcgacgtgtctacttgctcgttcccattgtgcaatgat
cttgagatgcgtcatctttttgggagatatcgcctattgtatacgtccttcgtacgatgc
atgaagtacttggatcgtctcaaagatgacgccctcagcggaaggactccatcgagctac
actaactccaatcggcatgagttgtatccttacaatagaaatggaagtcttaaggcctac
tttgcgagggcgagaagaattgttcggcagaatcgtcgcaatggtggatctgcgagcagc
agcgacagtggaagcaggcttactgactcaggcgaggaagataagaaaccggctgcggtg
gagactgctaattcagataattcacgggagcaagtggtgagacctaccggtccaaggctt
ggtcgatcaatgctgacagatcgacttcttaggccgactggtgctggagaagttgacaat
gtgaatcttccctggtcttgtgcaatctactcagttgttaattggatggttgcattcgca
gatgtggagggaattcaaatcatgtgtctcaaggtcttgccatacctcctcgaggatgag
agtcaaaggaccactgctcagcgagcaggtcttaccgatagtgttctgcgggcgatggtt
ctattccctgacagtattgaactccatactgtggcattccacaccctcgtccttcttgct
agacctctcggtggcaacgaaggcatgctctttcacactgccatggtcaacacgagaggt
atctttaatgaaggatcaagcagcagcaagaacggaatcgtcattatgcttgactccatg
aggagattcgctcaagatgagattctgcaggccatgagttgctggtcattggtgaatgtg
gctcttactccgcttcaaaagacaatgcttgtcaagttgggtggtctcactgtcactgcc
aacgcaatgctccagcatccgtacaacgccgaagttcagtttagggctctctttgcattg
atcaatctcgtcattccttccgaggtacgaccggaagagtcagaggagatgagggagatt
gaacgtgagatcttccagcagctcggagaagtaggtgatactagcgaaaaggagatgtta
gatgcaagtgttggccaaatctccaaccttgtggtggtggcgatgaaaaacttttgctcc
agcgaagcaatattgaatagggcgtgccttgtcctccacaacttgtcattgaacgaggat
taccacagtattcttctctggacgcccaattgctaccaaatgcttgaatggtgtatcggt
aattacccacacgatcacgtcctacaacaaagtgcaggagggaccattcaacgattgaat
tctaccttgagtgcagatgacgaattacgcgcacgatttacacactcgatacgtgcccag
cagcaacattcattggaaatggcgaggagagaggctgtctacctccaagaacagcaagag
caacaagagggacagcaggagatggacgtcgcatag
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