Thalassiosira pseudonana: THAPSDRAFT_2085
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Entry
THAPSDRAFT_2085 CDS
T01078
Name
(RefSeq) predicted protein
KO
K10751
chromatin assembly factor 1 subunit B
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_2085
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
THAPSDRAFT_2085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
ANAPC4_WD40
WD40_Prp19
Beta-prop_WDR19_1st
Rrn6_beta-prop
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
7452164
NCBI-ProteinID:
XP_002287132
JGI:
2085
UniProt:
B8BTC2
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All DBs
Position
2:125947..128571
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AA seq
824 aa
AA seq
DB search
MKVETPQILWHNTLNGSQKENGKNSPILSCDLLDGGDAIDGAHVVVVRGSSANAATTSAT
TNDTAGGRNAILATAGGTEVNLWRVGFTSDAARTTTASGASKILVKPQMPGAAAAATTGP
RRGSEHTQISHVLTLSKYTNERTINGVKFSPDGHHLCAVGDGGLVVVWSLPGTNSNNVAT
AAYRWCNTLTDEKDLQFKSIFNQSDDVMDISWCSSSKRFTVCSLDHMMVVYELVLPSSSS
SSSSDGGGGGGSSTAKQQQQWTCVHRSTKDHTHYIQGVAYDPKGVYLASQGSDRMVKVYS
RKVVKEREVKEGLGRFVVKGCEEEVEEEERKDGGKETKVASAVVVVIEGENVSVEKLGGG
EETVTEGNGVADKTEGATPATEEEVRTDAAAISNEHKHLIIQSKVLPDILTNSKFELQNK
TKTLKFLNGPSSGKSEGAATTTTTTNGTTAGGSNNDGDTNEEITDGDAKGKEGPNNNAKR
HHMFADELTVGSFFRRLAFTPDGAFLVAPAALWHGSEAHSNGSSEDTGNEKAQGDDAESA
MRSPTSVAKIGGDERIAEASFATYLFARHNFDQPYKVLTGLEKPSVVVRPNPRLFTLPSK
SSTSSALPYRSIFAVLTIDTVIIYDTHHEQPLALARGLHYAGLTDATWSTDGMTLFVTSS
DGYVSILSFGQGELGEIYHAPDVQIVEKAGSESKVVESKPVDAQRVTSTVPIINTLVAKK
KKKVTLNLDANTSKEIESSAPIINTLIAKKKPKKAPTLVASTTASNAEGSKDESAADVVD
KKRPLDETKETDASAKSTEATEIVNVLVPKKKKKIAPTLVEASN
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtagaaacaccccaaatcctatggcacaacactctcaacggatcacaaaaagag
aacggcaagaattcgcccattttgagctgtgatcttctcgatggcggcgatgcaatcgac
ggtgcacacgtcgttgtcgtccgtggcagtagcgcgaatgctgccacgaccagcgcaacg
acaaacgacacagccggtggcagaaatgcaatactggccacagcgggtggaacggaggtg
aatctctggcgggtcggattcacatcggatgcggctcgtactacgactgcgtcgggtgca
tccaagattttggtcaagcctcaaatgcccggtgctgctgccgctgctacaacggggcca
cgacgaggcagcgagcacactcaaatatcacacgttctaactctctccaaatacaccaac
gaacgtacaatcaacggagtcaaattctcacccgatggacatcatctttgtgctgtgggc
gacggtggattggtcgttgtttggagtttgcccggtaccaacagcaataacgtggcaaca
gcagcctaccgatggtgcaataccctcacggacgaaaaagacctccaattcaaatccata
tttaatcaatccgacgacgtcatggatatctcatggtgttcttcctccaaacgattcaca
gtctgttcgctcgatcatatgatggtagtgtacgaattggtactcccatcatcatcatca
tcatcatcctcggatggtggtggtggtggtggtagtagtacagcgaagcaacaacagcaa
tggacgtgtgttcatagatctacaaaagatcatacacattatattcagggtgtggcgtat
gatcccaagggtgtttatctggcgagtcaggggagtgataggatggtgaaagtttatagt
aggaaggtggtgaaggagagggaggtgaaggaggggttggggaggtttgtggtcaaggga
tgtgaggaggaggtggaggaggaggagcggaaggatggtgggaaggagacgaaggtggct
agtgctgttgttgttgttattgagggggagaacgtgagcgtagagaagttgggtggaggt
gaggaaactgtcactgagggcaatggcgtagctgacaagaccgagggagctactccagca
acagaagaagaggttcgaactgacgccgcggctatatccaacgagcacaaacatctcatc
atccaatccaaagtccttcctgatattctcaccaattccaagtttgaattgcagaacaag
accaagacgttgaagttcttgaatggtccctcatccggaaagagcgagggggcagctaca
accacaactacaaccaacggcactactgcaggtggtagtaacaacgatggagacaccaac
gaggaaataaccgacggagatgccaaaggaaaagaaggaccaaataataatgccaaacgt
caccacatgtttgcagatgagcttacggtcggttccttctttcgtcgtttggcattcaca
ccggatggtgctttcttggtggcgcctgcggcattgtggcatgggagtgaggctcatagc
aatggtagcagtgaagacaccggtaatgaaaaggcacaaggggatgatgcggagagtgcg
atgagaagtccgacgtcagttgccaagattggtggggacgagaggattgcagaggcatcg
ttcgctacgtatttgtttgcgaggcacaattttgatcagccgtataaggtgttgactggt
cttgagaagccatcggtagtagttcgtcccaatcctcgtctcttcacactcccatcaaaa
agctccaccagtagtgccttaccctacagatccatctttgctgtccttaccattgacacc
gtcatcatctacgacacccaccacgaacaaccactcgcattggcacgaggattgcattac
gcaggattgacggatgccacttggtctactgacggaatgacgttatttgtgactagttcc
gatggatatgtgtctattttgagttttggacagggagagttgggtgagatttatcatgct
ccggatgtgcagatagtcgagaaggctggaagcgaaagcaaggttgttgagtcaaagcct
gttgatgcacagcgtgtgaccagcacagtgccaatcatcaatacacttgtggcaaagaaa
aagaagaaagtgactctcaaccttgatgccaatacctccaaagagattgaaagctctgct
ccgattatcaacacgttgatagcgaagaagaagccaaagaaggctcccactctggttgct
tctacaactgcatccaacgccgagggaagtaaagatgaaagtgctgccgatgttgttgat
aagaagcgcccattggatgaaacgaaggagacagatgcatcagcgaagtctacggaagca
actgaaatagtgaacgtactcgtacctaaaaagaagaagaagattgctcctacactcgtg
gaggcatccaactga
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