Thalassiosira pseudonana: THAPSDRAFT_20928
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Entry
THAPSDRAFT_20928 CDS
T01078
Name
(RefSeq) predicted protein
KO
K01649
2-isopropylmalate synthase [EC:
2.3.3.13
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00290
Valine, leucine and isoleucine biosynthesis
tps00620
Pyruvate metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01210
2-Oxocarboxylic acid metabolism
tps01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
THAPSDRAFT_20928
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
THAPSDRAFT_20928
Enzymes [BR:
tps01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.13 2-isopropylmalate synthase
THAPSDRAFT_20928
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HMGL-like
LeuA_dimer
HCS_D2
Motif
Other DBs
NCBI-GeneID:
7453398
NCBI-ProteinID:
XP_002286323
JGI:
20928
UniProt:
B8BRI7
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Position
1:2057417..2059627
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AA seq
658 aa
AA seq
DB search
MRIYAASLALALSYACSTSAFTPSKHPSVTRSTHRPAAAVIAIASRSPTTTSLSSSISED
PAIQELYRRRPRPEYIPGKISDPDYVRIFDTTLRDGEQSPGATLTSSEKLEIARNLAKLG
VDIIEAGFPIASPDDFNGVKQIADVVGNEVFEDGYVPVIAGLSRANEKDIARAWDAVKGA
MRPRIHTFIATSEIHMKSKLNKTPDEVVEIAVNAVTFAKGLGCDDIEFSPEDAGRSDPEF
LYRILGRVIEAGATTLNIPDTTGWNMPWEFGELIKKLRENVPGAENVVFSTHCQNDLGLA
TANSLSGALNGARQLECTINGIGERAGNASLEEVVMSLALKGDEQFKGGPGTGKLYTAIN
PVYITPTSKMVSEYTGMKCQPHKAIVGANAFQHESGIHQDGMIKDKSTYEIMTPESIGLM
RGESQSGAGIVLGKHSGRNAVGTRLREMGYDLDMDKLNAVFARFKEVAEKKKGGLDDDDL
ESLVMDQSQSTNELWKVTGLQTTTGISGIPTSTVKMMGPDGVERFVSATGTGPVDAVYKA
IDQIMGVSVELESYSMNSVNEGIEALASTRVVIVPNANGPNDSVVMDAQTSQLRERKFSG
SGSDTDIITSSARAYVSALNKLLTWQMRRVANGASDANDSGIGDAVAVEGHGPVVVAN
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgagaatctacgccgcatccttggccttggccctctcatacgcgtgctccacgtcagca
ttcaccccctccaagcacccaagcgtcacccgctccactcacagaccggcagcagcagtc
atcgccatcgcctcacgctccccaacgaccacatccctctcctcctccatctccgaagac
ccagccatccaagaactctaccgccgtcgtccacgccccgaatacatccccggcaaaatc
tccgacccagactacgtccgcatcttcgacaccacccttcgcgacggagagcaatccccc
ggagccaccctcacgagctccgaaaaactcgagatcgcgcgcaaccttgccaaattgggc
gtggacatcatcgaagcgggcttcccaatcgccagtcctgacgactttaacggagtgaag
caaattgccgatgtggtggggaacgaagtgttcgaggatgggtacgtcccggtcattgcg
gggttgagccgtgcgaatgagaaggacattgctcgtgcgtgggatgccgtcaagggggcg
atgaggcctcgtattcatacgtttattgccacgagtgagattcatatgaagagcaagttg
aataagactcctgatgaggttgtggagattgcagtgaatgctgtcacgtttgccaagggg
ttgggatgtgatgatattgagtttagtcctgaggatgcggggaggtcggatccggagttc
ttgtacaggattttgggacgcgtgattgaggctggagctactacgttgaatattcctgat
accacggggtggaatatgccttgggagtttggagagttgattaagaaattgagggagaat
gtgcccggggctgaaaatgtcgtgtttagtacgcactgtcagaatgatttgggattggct
acggcgaatagtttgtcgggagctttgaacggagctcgtcagttggaatgtaccattaat
ggtatcggcgagagggctggaaacgctagtttggaggaggttgtcatgagtctcgccttg
aagggagacgagcagttcaagggagggcccggaactggaaagctctacactgcaatcaat
ccggtgtacatcacccccacatccaaaatggtctctgagtacaccggaatgaaatgccaa
cctcacaaagccatcgttggagcgaacgccttccaacacgaatctggtatccaccaagac
ggtatgattaaagacaaatccacttacgaaatcatgactcctgagtctattggtcttatg
cgtggagaatctcagtctggtgcgggtatcgtcctcggaaagcactctggaaggaatgcc
gttggaactcgtcttcgtgagatgggatatgatttagatatggacaagttgaacgctgtc
tttgctaggttcaaggaggttgctgagaagaagaagggaggattggatgacgatgatttg
gagtctttggtgatggaccaatcgcaatcgacgaacgagttgtggaaagttacgggattg
caaacaaccactggtatctcgggcattcctacctctaccgtcaagatgatgggccccgat
ggagttgagaggtttgtttctgctacgggtactgggccagttgatgccgtgtacaaggct
attgatcagatcatgggagtttcggtagagttggagagctattccatgaactctgtgaat
gagggtattgaggctcttgcaagcaccagagtcgtcattgtaccaaacgccaacggaccc
aacgacagcgttgtcatggatgcacagaccagtcagcttcgagaacgcaaattctctggc
tcgggatccgacacagatatcatcacctcctctgctcgtgcatacgtttcagctttgaat
aagctcttgacatggcaaatgcgacgagttgcaaatggtgcttcggatgcaaatgacagt
gggatcggtgatgctgtagctgtcgaaggtcatggccctgtggtagttgcaaattag
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