KEGG   Thalassiosira pseudonana: THAPSDRAFT_20928
Entry
THAPSDRAFT_20928  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K01649  2-isopropylmalate synthase [EC:2.3.3.13]
Organism
tps  Thalassiosira pseudonana
Pathway
tps00290  Valine, leucine and isoleucine biosynthesis
tps00620  Pyruvate metabolism
tps01100  Metabolic pathways
tps01110  Biosynthesis of secondary metabolites
tps01210  2-Oxocarboxylic acid metabolism
tps01230  Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:tps00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00620 Pyruvate metabolism
    THAPSDRAFT_20928
  09105 Amino acid metabolism
   00290 Valine, leucine and isoleucine biosynthesis
    THAPSDRAFT_20928
Enzymes [BR:tps01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.3  Acyl groups converted into alkyl groups on transfer
    2.3.3.13  2-isopropylmalate synthase
     THAPSDRAFT_20928
SSDB
Motif
Pfam: HMGL-like LeuA_dimer HCS_D2
Other DBs
NCBI-GeneID: 7453398
NCBI-ProteinID: XP_002286323
JGI: 20928
UniProt: B8BRI7
LinkDB
Position
1:2057417..2059627
AA seq 658 aa
MRIYAASLALALSYACSTSAFTPSKHPSVTRSTHRPAAAVIAIASRSPTTTSLSSSISED
PAIQELYRRRPRPEYIPGKISDPDYVRIFDTTLRDGEQSPGATLTSSEKLEIARNLAKLG
VDIIEAGFPIASPDDFNGVKQIADVVGNEVFEDGYVPVIAGLSRANEKDIARAWDAVKGA
MRPRIHTFIATSEIHMKSKLNKTPDEVVEIAVNAVTFAKGLGCDDIEFSPEDAGRSDPEF
LYRILGRVIEAGATTLNIPDTTGWNMPWEFGELIKKLRENVPGAENVVFSTHCQNDLGLA
TANSLSGALNGARQLECTINGIGERAGNASLEEVVMSLALKGDEQFKGGPGTGKLYTAIN
PVYITPTSKMVSEYTGMKCQPHKAIVGANAFQHESGIHQDGMIKDKSTYEIMTPESIGLM
RGESQSGAGIVLGKHSGRNAVGTRLREMGYDLDMDKLNAVFARFKEVAEKKKGGLDDDDL
ESLVMDQSQSTNELWKVTGLQTTTGISGIPTSTVKMMGPDGVERFVSATGTGPVDAVYKA
IDQIMGVSVELESYSMNSVNEGIEALASTRVVIVPNANGPNDSVVMDAQTSQLRERKFSG
SGSDTDIITSSARAYVSALNKLLTWQMRRVANGASDANDSGIGDAVAVEGHGPVVVAN
NT seq 1977 nt   +upstreamnt  +downstreamnt
atgagaatctacgccgcatccttggccttggccctctcatacgcgtgctccacgtcagca
ttcaccccctccaagcacccaagcgtcacccgctccactcacagaccggcagcagcagtc
atcgccatcgcctcacgctccccaacgaccacatccctctcctcctccatctccgaagac
ccagccatccaagaactctaccgccgtcgtccacgccccgaatacatccccggcaaaatc
tccgacccagactacgtccgcatcttcgacaccacccttcgcgacggagagcaatccccc
ggagccaccctcacgagctccgaaaaactcgagatcgcgcgcaaccttgccaaattgggc
gtggacatcatcgaagcgggcttcccaatcgccagtcctgacgactttaacggagtgaag
caaattgccgatgtggtggggaacgaagtgttcgaggatgggtacgtcccggtcattgcg
gggttgagccgtgcgaatgagaaggacattgctcgtgcgtgggatgccgtcaagggggcg
atgaggcctcgtattcatacgtttattgccacgagtgagattcatatgaagagcaagttg
aataagactcctgatgaggttgtggagattgcagtgaatgctgtcacgtttgccaagggg
ttgggatgtgatgatattgagtttagtcctgaggatgcggggaggtcggatccggagttc
ttgtacaggattttgggacgcgtgattgaggctggagctactacgttgaatattcctgat
accacggggtggaatatgccttgggagtttggagagttgattaagaaattgagggagaat
gtgcccggggctgaaaatgtcgtgtttagtacgcactgtcagaatgatttgggattggct
acggcgaatagtttgtcgggagctttgaacggagctcgtcagttggaatgtaccattaat
ggtatcggcgagagggctggaaacgctagtttggaggaggttgtcatgagtctcgccttg
aagggagacgagcagttcaagggagggcccggaactggaaagctctacactgcaatcaat
ccggtgtacatcacccccacatccaaaatggtctctgagtacaccggaatgaaatgccaa
cctcacaaagccatcgttggagcgaacgccttccaacacgaatctggtatccaccaagac
ggtatgattaaagacaaatccacttacgaaatcatgactcctgagtctattggtcttatg
cgtggagaatctcagtctggtgcgggtatcgtcctcggaaagcactctggaaggaatgcc
gttggaactcgtcttcgtgagatgggatatgatttagatatggacaagttgaacgctgtc
tttgctaggttcaaggaggttgctgagaagaagaagggaggattggatgacgatgatttg
gagtctttggtgatggaccaatcgcaatcgacgaacgagttgtggaaagttacgggattg
caaacaaccactggtatctcgggcattcctacctctaccgtcaagatgatgggccccgat
ggagttgagaggtttgtttctgctacgggtactgggccagttgatgccgtgtacaaggct
attgatcagatcatgggagtttcggtagagttggagagctattccatgaactctgtgaat
gagggtattgaggctcttgcaagcaccagagtcgtcattgtaccaaacgccaacggaccc
aacgacagcgttgtcatggatgcacagaccagtcagcttcgagaacgcaaattctctggc
tcgggatccgacacagatatcatcacctcctctgctcgtgcatacgtttcagctttgaat
aagctcttgacatggcaaatgcgacgagttgcaaatggtgcttcggatgcaaatgacagt
gggatcggtgatgctgtagctgtcgaaggtcatggccctgtggtagttgcaaattag

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