Thalassiosira pseudonana: THAPSDRAFT_20998
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Entry
THAPSDRAFT_20998 CDS
T01078
Name
(RefSeq) microtubule-associated protein
KO
K16536
protein HOOK3
Organism
tps
Thalassiosira pseudonana
Pathway
tps04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
THAPSDRAFT_20998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_20998
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_20998
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tps04812
]
THAPSDRAFT_20998
Membrane trafficking [BR:
tps04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
FTS/Hook/FHIP (FHF) complex
THAPSDRAFT_20998
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
THAPSDRAFT_20998
Cytoskeleton proteins [BR:
tps04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Hook proteins
THAPSDRAFT_20998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
HOOK
Tropomyosin
BRE1
ACBP4_C
CCDC39
Motif
Other DBs
NCBI-GeneID:
7449066
NCBI-ProteinID:
XP_002286398
JGI:
20998
UniProt:
B8BRZ1
LinkDB
All DBs
Position
1:<2457737..2459710
Genome browser
AA seq
577 aa
AA seq
DB search
MSVTEARSAAVIEFFGCFLTVSTPIKELADLSDGVAMFEALSEISMDHFDPTTIGRDLGT
NWALKTSNLRKLLRNLEEFYTESLLKSADFESVSEQIPSIAKDGNEEGIMSIVELIAAAA
VTCEDKGVFVERIMEMEQQNAVELQTILQDVLGRLTDVDEGGEDEGEEDDDSLNFGSPEP
ADMSAASPQVLFASHGGGEDSEIVKERDELRSSLADARRELAAVKSKAKLQEEDDEADKK
KLRSLLDDAQSRLSEVENNLFTKEQEATQKARELRECETKINDLEEKCATLDDELDVAKD
KASRLAKAEATVAAYRKKLENMGAMDQDVKNMADQTEGYLRKIMELEKENNKIPALQRSL
EEAQSQAKKSEARCATAEESFKLKDNEITKLRNDAFTAEKAKKMYQEELTELRAQHASAD
EVSSPMANLSVGISDGLSEAKEKAMRLEIENSDLKTQLEQLQTQGTVNAAAASGDVPEAV
AALEKQLNDKNAEVTKLMNDKEKLEAYTKKTLQKFQEKYLVALQDCKAKLKEKHDKIEAL
EMRSANEKVAQKREERLLSSAIYELGLGMMQTRLGKH
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtcaccgaagcacgatccgccgcagtaatagagtttttcggctgtttcctaaca
gtatccactccaattaaggagctggccgatctatccgatggggttgccatgttcgaggct
ctttcggagatctcaatggatcacttcgacccaaccacaatcggccgcgatctaggcaca
aactgggcactcaaaacatccaacctccgcaaactcctccgcaacctcgaagaattctac
accgagtccctcctcaaatctgccgattttgaatccgtctctgaacaaataccatccatt
gccaaggacgggaacgaggagggtattatgagcattgtggagttgattgcggcggcggct
gtgacgtgtgaggataagggggtgttcgtggagaggattatggagatggagcagcagaat
gcggtggagttgcagactattttgcaggatgttttggggaggttgactgacgtggacgag
gggggcgaagatgagggggaggaggacgatgatagtcttaattttggatctcccgagccg
gctgatatgtccgctgcgtcgcctcaggtgctgtttgcttctcatgggggaggggaggac
agcgagattgtgaaggagagggatgaattgcgtagctcactcgcagacgctaggagagaa
ttggcagcggtcaagtctaaggcaaaacttcaagaagaggacgacgaagccgacaagaag
aagttacgttcattgctcgatgatgctcagtctagattgtcggaagtagagaacaatctc
tttacaaaagagcaggaagcaacacaaaaagcacgtgagttgagggaatgtgagacgaag
attaacgatttggaggagaagtgtgccactcttgacgatgaattggatgttgccaaagat
aaagcctccaggttagcaaaggcagaagccaccgtggcagcgtaccgcaaaaagttggag
aacatgggagcaatggaccaagacgtcaagaatatggctgatcaaacagagggatacctt
cgtaagatcatggagttggagaaggagaacaacaaaatcccagcattgcagagaagttta
gaggaggcccagagtcaggctaagaagtcggaagctcgttgtgctactgcagaggaatcg
tttaagttgaaggacaacgaaattaccaaactaaggaatgatgcatttaccgcggagaag
gcgaagaagatgtatcaggaagagcttacggagttgagggctcagcacgccagtgcagac
gaagtgagtagtccaatggcgaacctatcggtgggtatctcggacggtctatccgaagca
aaagaaaaggcaatgcgactagaaatcgaaaattcagatctcaagacacagctcgaacaa
ctacagactcaaggaacagtcaatgccgccgccgcatcaggagacgtacccgaagcagtc
gccgcattggagaaacaactcaacgacaagaatgccgaagtaaccaaactcatgaacgac
aaggagaaactcgaagcatacacaaagaagacattgcaaaagtttcaagaaaagtatctg
gttgcattgcaggattgtaaggccaagttgaaagagaagcatgataagattgaagcattg
gagatgcgtagtgcgaatgagaaggtggcacagaagagagaggagaggttgttatcgtct
gctatttatgagttggggttgggtatgatgcagacgcggctgggtaagcattag
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