Entry
Name
(RefSeq) predicted protein
KO
K12825 splicing factor 3A subunit 1
Organism
tps Thalassiosira pseudonana
Pathway
Brite
KEGG Orthology (KO) [BR:tps00001 ]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
THAPSDRAFT_21026
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:tps03041 ]
THAPSDRAFT_21026
Spliceosome [BR:tps03041 ]
Complex A
U2 snRNP components
U2 snRNP specific factors
THAPSDRAFT_21026
Complex B
THAPSDRAFT_21026
Complex C
U2 SnRNP specific factors
THAPSDRAFT_21026
BRITE hierarchy
SSDB
Ortholog Paralog Gene cluster GFIT
Motif
Motif
Other DBs
LinkDB
All DBs
Position
1:complement(2584953..2587456)
Genome browser
AA seq
764 aa AA seq DB search
MAPISGIIRPPPDIRAVADRTALFVSKNGRAFEHKILNSEKGKTPKFAFLHDASPFHAYY
ENRIRFYEEGGTDEEEKRKEEEEKKRRALEEEERAAKLKEEADAAAAAAKKKETKMKASA
VDPVARALLACRSKISDARTARSAAAAAAADATSKEAEDESAENQIKEPEATGPQPPPTL
RFVSLAAPANLTPLEVEVIKLTAQYVALSDKGSGPAKRDNFLSNLTLREWTNPEFMFLQP
RHAHFAYFTALVDGYRSFLPGGEEYERMQNKMKMDAKKERLAHLISDDNGGADAKQVAKS
ENTVKDCLEAAAYRTEYERDAAIRRREAAERDGGGGILGGAGFIDWHDFVVVETIEFAVD
EVVEALPPPTSLRLAALNNEQPEKDEAKIVEETKVEEEDDEMEESSSEEEDMGDDDDDDD
DDGGEKLKVVSNYQPKVVSTKEITGDASRTHIIDPITGKSIAIADMPEHMRIQLLDPKWQ
EEKKRFLEKQRETNFVAGDDIASNINRFAQARGDIFGASQAELQNQKNDSERRLMEANEL
IRAQAMQQPQPQPVGVVGVGVPPPPLAAMVPPPPPPPPPPPQMAQQSVSAEEPAAKRPKL
DDAAQPTIPPSNVTVASTVSIPMTFGAVPVPVPPLFDPNVMAAPVPPPPPPVPQQQETLP
EAEFIATLENPAEVAFCVRIPYDASNAGWNFNGQTIDLSPGATTTVKEVKAMLKEQLGGM
PINKMQLKHPDSGFMNKDGLTLAHFNVGPGMTLDLVPKTRGGRK
NT seq
2295 nt NT seq +upstream nt +downstream nt
atggcacccatctccggcatcatccgccccccacccgacatacgcgcagtcgccgaccgc
acggccctcttcgtctccaaaaacggacgagccttcgaacacaaaatcctcaacagcgaa
aagggcaagactcccaagtttgcctttttgcacgatgcctcgccctttcatgcgtattat
gaaaatcgtattcggttttatgaagagggaggcaccgatgaagaggagaagaggaaggag
gaggaagagaagaagagaagggctttggaggaggaggaacgggcggccaagttgaaggag
gaagcggacgctgcggctgccgcggcgaagaagaaggagaccaagatgaaggcatcggct
gtagatcctgtggcgagggctttgttggcttgtcgttccaagatatcggatgctcgtacg
gcgaggagtgctgcagcagcagcagcagctgatgctacatccaaagaggcagaggatgag
agtgccgagaatcaaatcaaggagccagaggctaccggtcctcaaccgcctcccacactt
cgatttgtgtcacttgctgctcctgcaaatctaacccccctcgaggtggaagtgatcaaa
ctaaccgctcaatacgttgccctgtccgataagggaagtggaccagccaagcgagacaac
ttcctcagcaacctaacgctacgagaatggacgaatccagaattcatgttcttgcaaccc
cgccacgctcactttgcctactttacggccttggtggatggatatcgtagtttcttgccg
ggtggggaggaatacgagaggatgcagaataagatgaagatggatgccaagaaggaacgg
ttggctcatttgatttcagatgataatggtggagccgatgcgaagcaagttgccaagtcg
gaaaacactgttaaggattgtcttgaggcagcagcctatcgtaccgaatacgaacgtgat
gcagccatccgcagaagagaagcggcagaacgtgatggaggtgggggaatacttggtgga
gcagggttcattgactggcatgatttcgttgtggtggaaacgattgagttcgccgtggat
gaagttgtggaggcgttgccaccaccgacttcgttgcgtttggctgcattgaacaatgag
cagcctgaaaaagatgaggcaaagattgtggaggaaaccaaggtggaggaagaagatgac
gagatggaggagtcttcatccgaggaggaagatatgggagacgacgatgacgacgacgac
gacgacggtggagaaaagcttaaggtggtatcaaactatcaacccaaagttgtatccacc
aaggaaatcaccggagacgcatcgcgcactcacattatcgatccaattaccgggaaatca
atcgccattgccgacatgcctgaacacatgcgtatccaactcttggatcccaaatggcaa
gaggagaagaaacgctttcttgaaaagcagcgtgagacgaactttgtggccggagatgac
attgcatcaaatatcaatcggtttgctcaggcccgtggggacatattcggtgcgtcgcag
gcagagttgcagaatcaaaaaaatgattcggaaaggaggttgatggaagcgaatgaactg
attcgtgcacaggcgatgcagcaacctcaaccgcagcccgtcggggttgttggggttgga
gtgcctccgcctccactagctgctatggtacctcctcctcctccaccaccaccaccacca
ccccaaatggcacaacaatctgtatcagcggaggaacctgcagcaaagagaccaaagctt
gacgatgcggctcagccaacgattccaccatcaaatgtgacggttgcttcaacggtgtcc
attccaatgactttcggggcagtcccagtacctgtgccacctcttttcgatcctaatgta
atggcagcacctgtaccgcctccgccgccgcctgtgccacagcagcaggagactcttccg
gaagcagagttcatcgctacattggagaatccagcagaagtagcgttttgtgtccgtatt
ccatatgatgcatcaaatgcaggctggaatttcaatgggcaaacgattgatctctctcct
ggagccacgacaacggtaaaggaagtaaaggcgatgctcaaagagcaattgggtggcatg
ccaatcaacaaaatgcaattgaaacatcctgattctgggtttatgaacaaggatggactg
acgttggctcatttcaatgttggacctggcatgacgctggatctcgtgccaaagactcgt
ggtggtagaaagtaa