KEGG   Thalassiosira pseudonana: THAPSDRAFT_21138
Entry
THAPSDRAFT_21138  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K26273  protein strawberry notch
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tps03036]
    THAPSDRAFT_21138
Chromosome and associated proteins [BR:tps03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    THAPSDRAFT_21138
SSDB
Motif
Pfam: AAA_34 Helicase_C_4
Other DBs
NCBI-GeneID: 7452197
NCBI-ProteinID: XP_002287660
JGI: 21138
UniProt: B8BTJ1
LinkDB
Position
2:complement(310736..>317030)
AA seq 1626 aa
MSAAAAVAAAAASSTEVAKPAATTAAAGANKDKEDGVNAEQEITYTKYKPAKLKFGMDHP
GEEVPTSVSCNHHQTQLTMQQIDPVVENSTLSAVEPPDIKYNLAMPSSIIAKGKLSNLQL
EAIVYGCQRHDTDLPTEKKSRGKENDEPSDDITEDAMNVKGEGKTEGEEKGKDRTPIRAG
FLLGDGAGMGKGRTLAGFAVENIARGRKRHVWISVSSDLYEDAKRDLSDLGLTDYAENNC
YNLGKLPYGNLVDPPTSANGSKKNNGGKKGGKKTASKKVSGDYEEGVMFVTYSTLIGKSN
IGYTRLEQLIDWCGGEEFDGLIMLDECHKAKSVDLDENGNAKRAGKNSACSQIAAKVVEL
QNALPRARVVYCSATSVSEPKNLGFMSRLGLWGPGTEHPTGFNAFLQGIKRLGTGAMELH
AMHLKASGALVARTLSYEDCEFALEEGVTDPKIHDVYNASTELWTDLYHQLADRCAKLKS
KEGMQERIDNILGADNMSLNEELREHISLHEDSDSEGSDDDDEGIAEQRNLRRKFRNRKP
GHLKGLFWGAHQRFFRSLCIASKVDKAIEFAKEAIEDGHCCVIGLQTTGEARAKDAAKAA
GFDKDDGGDFDSFVSAPNEDLKRIIMQMFPLPPKPKGVIAPEFLNPLKKDEIIWGDGAES
TEGDEERPFRAARHKHFDYAEGVDKEGNIIEKSKTSISGKKRNKALKRARKKKSRRSSTS
TSATTVDPAADDSDMSRELGLRSDDSASDYSLSSDSESESEYVEKIKSTRRIPWNEITVG
KDQTTMTRAERIDYQRKILYKKEVERVQKWLATVDDLHLPPNPLDRLLNELGGSEKVAEL
TGRKTRQVKRYDPMEDKMMVVFEKRRADDGPVDKINIEEKNNFQNGDKLIAILSEAASTG
ISLHADRRVKNQRRRVHRQFCVSYAVFLLASNTVTLELPWSADKAIQQLGRTHRSNQVTG
PIYKFLISEVGGEARFAAAVARRLALLGALTQGDRRATGSANSLGLGNFDMDNDYGKRAL
RKMLDNIFNNSATSIVDGSNEHYSNTIEVIDKHLTIKLGTDRDIDLEEAIRPSEGDSKAD
QTYDTMMYNLLLGPLKAVAEDRSRAVRENRTIAGYVTSLQDGTETIATVKPKIDAEIKRA
KDAGLNFNNICGLWLYDVGIFSDMWEQGGIKGSFGVPKFLNRCLGLRLSKQAALTKYFLK
SLEAEIKEAKAAGLYDTGIKVSDVIQPKTIQGNSIEFVGKPRVFCFRGLAAKEEKVYLYT
VAIDHGVHSDDALTMYNKMNEQAPDPNSRSPITTGFYVNLPPWWPNKGRTFLSKDMVHKM
INEKKVWKGGYSVSQAIDIWSKEFSKADRPVSETYQFSCTGRHDEAHIFSGRIVPLLNKM
LSCAEVSATPEGIHGRPFEIVRVETTKATYANTKQEEAESNDKMQIETHFTYSCVDVNGE
DAVGKGIARPLDRKRKQCIIRGKITKYLSDEEMFCGHYSDGTRLKLDEEQARGGRVAFEK
ECKRLVGAGIPQEDASNMSCRTVGASKAMHKVRQPVLEDGEDEDPSSREKIFEEVFNGEI
PDTIVGLQFAQHDVNFKNYRVPLWDKVLMSMSEHLVKENVMSALQIAAFEKSENELFKEE
SSLEVV
NT seq 4881 nt   +upstreamnt  +downstreamnt
atgtctgcagcagcggcagtagcagcagccgctgcatcctccaccgaagtcgcaaagccg
gcagcaactacagcagcagcaggcgcaaacaaggataaagaagatggagttaatgccgag
caggagatcacgtataccaagtacaaacctgctaaattgaagtttggcatggatcatcct
ggtgaggaagttcctacatctgtgtcttgcaaccatcatcaaacacaactcacaatgcaa
caaatagacccggtggttgaaaactctacactcagtgcagtagaaccccccgatatcaaa
tacaatcttgccatgccaagtagcatcattgccaaaggaaaactatccaatctacaactc
gaagcaatcgtctatggatgccaacgccatgatactgatttgcccacagagaagaagagc
cgggggaaggaaaatgacgagccttcagatgatataacagaggacgcaatgaatgtgaag
ggagagggtaagacggaaggagaggaaaaggggaaggatcgtactcccatccgagcaggc
tttctactaggtgacggggccggtatgggcaaggggagaacactcgctggctttgcagta
gaaaatattgcaagggggaggaaacgacatgtatggatcagtgttagttctgatttgtac
gaggatgccaaacgtgatttatcagatttgggattgactgactatgccgagaacaactgc
tacaatctcggcaagcttccatatgggaatcttgtcgatcctccgacgtctgcaaatgga
agtaagaagaacaacggagggaagaaaggggggaagaagacagcatcaaagaaggtctct
ggggattacgaagagggtgtcatgtttgtaacgtacagtactctcattggaaagagcaac
attggatatactcgactcgaacagctgattgattggtgtggtggggaggagtttgacggg
ttgatcatgcttgatgaatgccacaaagctaagtcggttgatttagacgaaaatggcaat
gccaagagagctgggaagaatagtgcatgttcacaaattgctgccaaagttgttgagtta
cagaatgcactgcctcgtgccagggtcgtctattgctcagccacgagtgtgtccgagcca
aagaatcttggtttcatgtctcggcttgggttatgggggcctggaaccgagcatccgact
ggtttcaatgcctttttgcagggtataaagcggttgggaactggtgcgatggaattacat
gcaatgcatttgaaagcctcgggagctctggttgctcgtacgctatcctatgaagattgt
gagtttgcgcttgaagaaggagtgacagatccaaagattcacgatgtatataacgccagc
actgaattatggacggatttgtatcatcaattggctgatcgttgtgcaaaactgaaaagt
aaagagggtatgcaagagcgaatcgataacatattgggggctgataatatgtcattgaac
gaggagctgcgtgagcatatttcactacatgaagattctgactcggagggtagtgatgac
gatgatgaggggatcgctgagcagcgtaacctccgaaggaagttcagaaatcgcaaacct
gggcacttaaagggattgttttggggagcacatcagagattcttcaggtctctatgtatt
gcttcaaaggtggacaaagcgattgagtttgccaaagaagctattgaagatgggcattgc
tgtgtcattgggctccaaacgactggggaggctcgcgcgaaagatgctgctaaggcagct
gggtttgacaaagacgacggtggcgactttgactcctttgtttcagctccaaacgaggat
ttgaagcgtatcattatgcaaatgtttcctcttcctcccaagccaaaaggagtgattgca
ccagagtttctcaacccattgaagaaggatgaaatcatttggggtgacggcgcagaatcg
actgaaggtgatgaggaacgcccatttcgtgctgctcgacacaaacattttgattatgca
gagggagttgacaaagagggcaatatcatcgaaaagtccaagacgagcatttccggaaag
aaaagaaataaggcgcttaagagggcaagaaagaaaaagagtcgcagaagctccacatcg
acttctgccaccactgtcgacccggctgctgatgatagcgatatgagcagagaattgggg
ttgagaagtgatgattccgccagtgattattctctcagcagtgatagtgaaagcgaaagc
gagtacgtcgagaaaatcaagtcgaccaggcgtattccttggaacgaaatcaccgttggt
aaggaccaaacgacaatgacgagagccgaaaggattgattaccagcgaaagattctatac
aaaaaagaggtcgagcgtgtgcaaaagtggttggcgactgtagacgatcttcatctccct
cctaaccctcttgatcgtcttttgaacgagttaggaggctctgagaaggtggccgaacta
actgggagaaagactcgtcaagtgaagcgttatgatcccatggaagataagatgatggtg
gtatttgagaagcgtcgagccgatgatggccctgtagataagatcaacattgaggagaaa
aacaatttccagaacggtgataagctgattgccattctctccgaagccgccagtactggt
atctctcttcatgccgatagacgcgtcaagaaccaacgtcgtcgcgtgcacaggcagttc
tgtgtatcttacgccgtgtttctcctcgcatccaatacagttacgctcgagcttccgtgg
tcagccgacaaggccatccagcagcttggcaggacgcatcggtcgaaccaagttaccggt
cccatatataagtttctcatctccgaggttggtggggaagctcgttttgccgcagctgtt
gctcggaggctagccttgctcggagcattgactcaaggagatagacgtgccacaggatct
gccaattctctcgggttgggcaactttgatatggacaatgactacggaaaacgcgctctt
cgtaagatgttggataatatatttaacaattcggccacgagcatcgttgatggatcaaat
gagcattactcaaacactatcgaggtgattgacaaacacttaacgatcaaactcggtacc
gatcgagacattgatctcgaagaggctattcgtccctctgagggtgacagcaaggcagac
caaacctacgacaccatgatgtacaacttactcctcggtccattaaaagccgtcgcggaa
gatcgttctagggcagtcagagagaatcgcactatcgctggatatgtcacttctctccaa
gacggaacagaaacaattgcaaccgtgaagcccaagattgacgctgaaataaagcgggct
aaagacgcagggctgaacttcaataatatttgtgggctttggttgtacgatgtgggtatt
ttcagtgacatgtgggaacaaggggggatcaaaggaagcttcggggtgcccaagttcctc
aatcgttgtctcggcctacgtctttcaaagcaagctgcgcttaccaaatacttcttgaaa
tcgctcgaggcagagattaaagaggcgaaggctgctgggctttatgatactggcattaag
gttagtgatgttattcaaccaaaaaccattcaaggaaatagcatcgagttcgttgggaag
cctcgagtgttttgttttcgtggtctagctgcgaaggaggaaaaagtctacctttacacg
gtggcaatcgaccacggtgtacattcagacgatgcactgacaatgtataacaaaatgaac
gagcaagcgcctgaccctaactcgaggagtccaatcaccactggtttctatgtaaaccta
cctccgtggtggcctaataaaggaaggacctttctcagtaaagacatggttcacaagatg
ataaacgaaaaaaaagtgtggaaaggaggctacagcgtgagccaggcgatagacatatgg
agtaaggagttcagtaaggcagatcgacctgtttctgagacctaccaattctcttgcact
ggtcgtcacgacgaagcgcacatcttctccggccgcatcgttcctttgctgaacaaaatg
ctcagctgtgccgaggtctccgctactcctgaaggaatacatggtaggccttttgagatt
gtccgtgttgaaacaaccaaggccacatacgccaacacgaagcaggaagaggctgagtca
aatgataagatgcagattgaaacacattttacctactcctgtgttgacgtcaatggcgaa
gatgcggttggaaagggcattgctcgccctcttgatagaaaaagaaagcaatgcattatt
aggggaaagattacgaagtatctatccgatgaagagatgttctgcggtcactactcagac
ggcacaagactcaagcttgacgaggagcaggcgagaggaggaagagttgcctttgaaaaa
gaatgcaagcgtttggtaggagctggtatcccccaagaggatgcttctaacatgtcctgt
cgtactgtgggtgcttccaaggccatgcataaagtgcgacagcccgtcttggaagacggc
gaggatgaagatccatcctcaagagaaaaaatcttcgaagaagtcttcaacggggagatt
ccggacacaatcgttggacttcagtttgcacagcatgatgtgaacttcaaaaattatcgt
gtaccactctgggacaaggtgttgatgagcatgagcgaacatttagttaaggagaacgtt
atgtcggccttacaaattgcagcatttgagaagtctgaaaacgagcttttcaaagaagaa
agttcacttgaggtagtgtag

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