Thalassiosira pseudonana: THAPSDRAFT_2130
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Entry
THAPSDRAFT_2130 CDS
T01078
Name
(RefSeq) predicted protein
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tps03021
]
THAPSDRAFT_2130
Transcription machinery [BR:
tps03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
THAPSDRAFT_2130
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRF1
TFIIB
Motif
Other DBs
NCBI-GeneID:
7442207
NCBI-ProteinID:
XP_002287155
JGI:
2130
UniProt:
B8BTG5
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All DBs
Position
2:249158..250318
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AA seq
386 aa
AA seq
DB search
MTALRLVARMKRDWIVAGRRPAGICAAALLIASRAHGFDRQHHDVTKVLRVCGLTVMSRV
KEFEATPSAGLTLEEFHTNDVEGEVDPPIFTKNRIKEARAKAVMDNNVELLTSGALDNPN
HKGKWASKWRRPKAKTDRTSQYAEMYEALETEMTEDALEQQYVNAAESGEDIQDCQSDIK
QEPLVSFTRAEQIVEHRAPQGISTLHAEISYPLGKNHRPIVLPNQATAEELEAPRQKAVD
TLNFGEWKTGVPSDAADEVDFLFHTDDEVREREAVFNLQNREYIEIQHQKENERLLAEAA
SKAKQEDEIAQEEGRRRYLKTSRARKRNPNELTTEEALLEVVRTRKISRKINYDAMSALF
DDTGDFSTELLSDRERKKEEGAIGEV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgactgccctccgtctcgtagctcgtatgaaacgtgattggattgtagcagggagacgc
cccgccggtatctgtgctgccgcccttcttatcgcatctcgtgctcacggattcgatagg
cagcatcacgacgtgacaaaagtgctgagagtatgtggtcttacggtcatgagcagagta
aaagagtttgaggcaactcccagtgcaggattgacgttggaggagtttcacaccaatgat
gttgagggtgaggtggatccacccatctttacaaagaacagaatcaaggaagcaagggca
aaagcagtaatggacaacaacgtagagttgttgacgagtggagcattggataatcctaat
cataaagggaagtgggcgtccaaatggagaagaccaaaggcaaagactgataggacttct
cagtatgccgagatgtacgaagcgctagaaactgagatgacagaggatgcattggaacaa
caatatgtgaatgctgcagaaagtggagaggacatacaagactgtcagagtgacatcaag
caagaaccacttgtttcgtttacacgtgcggaacagattgtggaacatcgtgcaccgcag
ggaatctcgacgttgcatgccgaaatcagctatccattggggaagaatcaccgtccaatc
gttctacccaatcaagctactgctgaagaactggaggcacctagacagaaggcagtggat
acgttgaactttggggaatggaaaaccggtgttccctcggatgctgccgatgaagttgat
ttcctctttcacacggatgacgaagtacgagaacgcgaagcggttttcaacttacaaaat
agggagtatattgaaatccaacatcagaaagaaaacgagaggcttctggcagaagcggca
tcaaaggcaaagcaagaggatgagattgcacaagaagaaggaaggaggcgatacttaaag
acgagtcgagcgcgaaagaggaatcccaatgaacttacaacggaggaggcattgcttgag
gttgtcagaacacgaaagatctcacgaaagattaattatgatgcaatgagtgcacttttt
gatgatacgggggatttctcaactgagttattgagcgaccgagagcgcaagaaggaggag
ggagcgattggtgaggtgtag
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