KEGG   Thalassiosira pseudonana: THAPSDRAFT_21533
Entry
THAPSDRAFT_21533  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K15436  transportin-3
Organism
tps  Thalassiosira pseudonana
Pathway
tps03013  Nucleocytoplasmic transport
tps03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    THAPSDRAFT_21533
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    THAPSDRAFT_21533
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:tps03016]
    THAPSDRAFT_21533
Transfer RNA biogenesis [BR:tps03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    THAPSDRAFT_21533
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_2nd Xpo1 TPR_TNPO3_IPO13_3rd
Other DBs
NCBI-GeneID: 7450452
NCBI-ProteinID: XP_002288072
JGI: 21533
UniProt: B8BVT4
LinkDB
Position
2:complement(2301154..2304697)
AA seq 1096 aa
MSSHQHPQHQQQQQQQHLQDLPPHSSDPEQELPRVLLALQTVYAPNVASSSISGGLAAAF
ASSGAAGGGGPPSGRGAAAGSAASPFDRRDVADRYLTSFQRTAVAWIVCDRLLSTADIAT
PSATTTSEDSTLRTQRQFFAAQTLHAKCRSDVHQLPPSSLPSLRTSLLSHFVHHASDSVR
ASVENRPPNRPLVTRLAMAIASLAVQMSWYSILNDVSSTVLTPNPELGPAVLELFRSIPE
EADSTRLVMQNEEDLWHYRDVLRRECAVVLGLCEHAVRASHEACHRGHRDNNINSGGASF
PPGVVMQTQDVATTEAVLSCLQSWIRIVDMPPSLLEKTVLLPWMFDLLTDSTNGGFEMAV
DVLVEMMRSYTSERRQNEGLIGVIIPRVMALGQITDTNNAALQSPFQKAILEEDEDGMRG
YCRIFTEMGESYLSLILSHENMNQEALVELVLRCSNIPDKDLAGITLHFWYRFVMGLEDI
EPYEYRQIKIDSFAPQLTRLLATFTNLLRYPTGVDDLSPDRLDDIEFSRLYFTDTIEDCC
RLMGGEVVLRTAGEPLQEECRRVASLPPDRQLSEWHGIEAYLYAIQSVSMYVPGDENRVV
PFVMGLIPQLPTEVPFLRATACQTVGKYASWLGSQPSYLQPLLPYLAQGLSIPRCATASA
VAIREISQTCSSLGDAVLQLYDGIVVAREQHRAMGTGGEDFILDIKNELAVLEGVCKAIS
NKLRNEPSTSPDVVNGYIKRLVQPVITNLKHLASPDYSASPKQVSAEICRLTVLIQNLRL
SMNSSAGIVNRSDFILSLMQESWPMLDVISQKFPRDFALCEKLCRLHKHALRECGSVAFT
PMLEPLIDQIVRNFSQSLSSPYLYLASICISEYGKNPTHSQQMFNMVANLSTSVFQALRS
AEDFTANPDVVEEFFYMAGRMVSNCPGPLVQSNLLNSLFQCAALGMKLHHKAANKGTLNF
LESTVSYNLKLRSSGSLDANEQANMAALERAIISDGQPLVINLAQALLGDLPSYPLDYGS
GSIAGVLFYLNQLCPDVLIQWIQPPLVSAPEHAKSAFLVTLRNQAARDEFNSSVRKFTSR
WWLEIVLAISWSVGGG
NT seq 3291 nt   +upstreamnt  +downstreamnt
atgtcctcccatcaacacccccaacaccagcagcagcagcagcaacaacatctccaagac
ctccccccccacagctccgaccccgaacaagaactcccccgcgtcctcctcgccctgcaa
acggtctacgcacccaacgtcgcctccagtagcatcagcggtgggttggctgccgccttt
gcgtcttcgggtgcggctggcggcggcggtccacctagcggacgtggtgctgcagctgga
agtgcggcatctcccttcgacagacgcgatgtcgccgatcgatatctgacctcctttcaa
cgcaccgccgttgcttggatagtgtgcgaccgtctcctctccacagccgacatcgccaca
ccctccgccacgacgacgtccgaagactccaccctaagaacacagcgccaattcttcgcc
gcacagaccctccacgccaaatgccgcagcgacgtacaccaactccccccctcctccctc
ccctccctccgcacgtccctcctatcgcactttgtgcaccatgcctccgattccgtccgc
gccagcgtcgaaaatcgaccccccaacagacccttggtaacgcgcctcgccatggcgatt
gccagtctggcggttcaaatgtcgtggtattcgatattgaacgatgtcagcagtacggtg
ttgacgccgaatccggagttgggaccggcggtgttggagctctttcggagtattccggag
gaggcggatagtacgcggctggttatgcagaatgaggaggatttatggcattatagggat
gttttgaggagggagtgtgctgtggtgttggggttgtgtgagcatgcggtgagggcgagt
catgaggcttgtcatcgtggacatcgtgacaacaacatcaatagtggtggtgcatcgttt
cctccgggggtggtcatgcaaactcaagatgtggcaactacggaagcggtattatcgtgt
cttcaatcttggatacgtatcgtggacatgcctccatccttattggaaaagactgtatta
ctaccgtggatgtttgatttactcaccgattctaccaatggagggtttgaaatggcagtg
gacgtattagtggagatgatgaggagttataccagtgaacgacgtcagaatgaaggattg
attggggtgattatcccccgtgtcatggcattgggtcaaattacagatacgaataatgca
gcattgcaatcaccgtttcaaaaggcgattctggaagaggatgaggatggaatgcgtgga
tattgtaggatatttacggagatgggagagagttatcttagtttgattttgagtcatgag
aatatgaatcaggaagctttggtggagttggtgttgaggtgttcgaatattcctgacaaa
gatctcgctgggatcacacttcacttttggtaccgcttcgtcatgggcctggaggatatt
gaaccgtacgaataccgtcagatcaaaatcgattccttcgctccacaacttactcgactg
ctggcaacattcaccaatctacttcgataccctactggagtggacgatttaagtcctgat
cggttggatgatattgaattttcacggttgtatttcacagatactattgaggattgttgt
cggttgatgggtggggaggtagtgttgcgaactgccggggagccattgcaagaggagtgc
cgtagggttgcttcgttgccaccggatagacagctttcggaatggcatggcattgaggcg
tatctttacgcaattcagtcagtttcaatgtacgttccaggagatgagaatcgtgtcgtt
ccgttcgtgatggggttgattcctcagctaccaacagaagtgccattccttcgtgcaacg
gcatgtcaaacagttggaaagtatgcatcttggttgggatctcagccatcatatttacaa
cctctgcttccatacttggcacaaggactttccattcctcgatgcgcgacggcgtcagcg
gtggcaatcagagagattagtcaaacatgtagctctctaggagatgcagtattgcaactt
tacgacggtattgtggtggcgagagaacaacaccgcgcaatgggaactggcggcgaagac
tttattcttgatatcaaaaacgagttggctgtcctcgagggagtatgcaaagctatatct
aacaaactgcggaacgagccttcaaccagtcctgacgttgtcaacgggtatatcaaacgt
ctggtacaaccggtcatcaccaacttgaagcatttggcgtcaccagattattcagcgagt
ccgaaacaggtatcagccgagatttgtaggcttactgtgctgattcagaacttgcgattg
tcaatgaactcttcagctggcatcgtcaatagatcagatttcattctcagcctcatgcaa
gagtcgtggcccatgctcgacgtcattagtcagaagtttcctcgtgactttgccttgtgc
gagaagctgtgtcgacttcacaaacatgcactgcgagaatgtggatcagttgcatttaca
cccatgttggagccactgattgatcagattgtcagaaacttctcgcaatctctgtcctct
ccctatctctacttggcaagcatctgtatctctgagtatggaaagaatccaacacactca
caacaaatgttcaacatggttgcgaatctctctacctcggtgtttcaagccttgcgtagt
gcagaggactttacggccaatccagacgtggtggaggagttcttttatatggctggacgc
atggtaagcaattgtccgggacctctcgtccagagcaatctactgaactcgttgtttcaa
tgtgctgctcttggaatgaagttacaccacaaagctgcaaacaaaggaacgctgaacttc
ttggagtcgactgtttcatacaacttgaagttgagatccagtggatcgttggatgcaaat
gaacaggcaaacatggctgctctcgaacgtgccatcatttccgatggacaacccttggtg
atcaatcttgctcaagctctattgggtgacttgccatcctatcccttggactatggaagc
ggtagcatcgctggagtattgttctacctaaatcaattgtgtccagatgtactcatacaa
tggattcagccacccttggtatcggcaccagagcatgccaagagtgctttcttggtaaca
cttcgcaaccaagcggctcgtgacgaattcaactcatcagttcgtaaattcacctcgaga
tggtggttggagattgtgcttgctattagctggtcggttggcggaggataa

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