Thalassiosira pseudonana: THAPSDRAFT_21582
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Entry
THAPSDRAFT_21582 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IQ
PDZ_6
Motif
Other DBs
NCBI-GeneID:
7452144
NCBI-ProteinID:
XP_002288132
JGI:
21582
UniProt:
B8BW52
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All DBs
Position
2:complement(2691633..2698770)
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AA seq
2128 aa
AA seq
DB search
MSARSRYLAAISPRAGDECDSTPTSTRSSSLGPLSSSSNFHNSTAAPSNFNSSSSRTATS
STLKSPSNIMGRQRGSVGNVVIGQSGHQQSISQQKTSSNSSNNMKAPPPPPPGPPPKKVK
KRGSVAGTVNLNASSNTGDVNVSAGSGNEATAMSHQQQQLGVGQHTADQQHPDTNKGETW
SPREEIQAGNVAKFKQLLWGGDTDNNNNNAAISTPTHHHQGSKQLQQRVLPPITPPRPHT
HFATSPVTNSSSNKGGGRRSTRSPSPPKYKLNAPPPLGIGTNNNDHANVSGGSNQHHQQR
TPPRSATNLAPPSRVLHARGTPDRSNPSPLRQRLGNLTPIDTSFGGGKSGRGGGADSNSS
NGNNTGGDKVTPTASSTRSRQLGSPFHNDTSNNNAEAAIGNANHAIHNAANAIHHHNSNN
NASPSRSSPIGITTLTAFKRPQQKVGIIFTRKSKQFMDVPVISKIMNDSIFAGHHANYGG
KCFSEAMGGDGGIGGVGGGGGLEGAEVIAVNGTPVRDPRHAAELVANAVDEVRLTIKRVG
AGGGSVGGSSPMPQAATPFLEKEGEGQEEEGNRTIDMDEESALSVKTEEDRKFEISGRVG
GLSVNTDRSRRSDQQQQQTTPKSSKSQDIAERRRKIAQAMLMSAEMVEDPINSASSGGKL
FGVISEDYWDTSNHDWRESVEVGSGRISAIEADSSEKEEKDVVEIEREVLAYDTTPLKEQ
SPAFTSPRSARSAAEKRRQAAMLMYNSEKMVDDNVDDLRLGTIDAIGLKDTISGPSPVQK
AGSEVSFEGNASVAKTDITTSSSATQRMGSSPHNRQLDGHAFSFAESATRAVGGAGGEGP
SPRNPVRLESPVAQRRKERAQKRLMMVDPNETSTDAPSPMAIGKPNIPISTAAIKKQPIL
KPAPSNNAPPTPTSQIQRIETDESVAASSAAAGSSVAASNVAASSSVVSEVNGESRTSRS
IFGSKKKSSSQNAVSSGDKKKKKSIFGVANLIRKASSKKSKISKKGKLIEDTILFQDRDE
QASSVSVKSSTSAASASVQQQSLTNDEVSPSTSATVEAVNNKEMMTEGEWDAFATSPFND
IATNGGDAFGFPKTTTSPERIDTDAFFVEGGVDAWGEPSAQLPVDFTPRKTNAGHFRKDP
DNSDAMSYDASEMSEVTNPTFAGSTVHTRPDQESDDVSKHSNAKKVAGTGASANHNRTSS
QGSSSQEQSESAVPLLAEGNSSGSGEGGDAFARNADGTGSQKENDGDTLATMIRGNKLPP
LYSSEKRGVINPFNPVDDPPLASLETLESSEDERAEIDGSAISRSESSNMAKSRILSKYA
KNGKIRKPIRAHDVRSGSKMEPRSVVKAAPISTALPVTSSQDVSAKQSEGQTYSMSLGSR
RRQDTLKAQPDSRNYSANESPSSMIAARPNQMQQVQNVTPDRPVSQSLVYRRRNGRSSPK
SMESGNALSSDRSISRYSYNIKKKQAPSLIDDPNYYSMENRLMQINDPIQRAGVRLLWAA
AIPIQTQSRRFLARQNAIKRMCAILTIQAFSRRWLAERDLEIAIWSAIQIQAAFRGWFAR
DSLEDNHYCATQIQRIVRGYLSTMHVFEDLYSITIVQSVVRRHLAINNAVDRLSSIIAIQ
SWYRGVRARSILCEQEYSAIAIQANWRRYLAQMSFQFDIIDIIIVQSIVRRRKGIQTRKN
LCATKIQSAWRSYDCSMAYVHTLADVITVQSVVRRWQTVRFLAAVRVQCLMRMFLAKKSF
AEEMSMYTLVTRHASATKIQASWRSYCAQVQMLLDLVNVIVIQSLWRRRCVVVLYGPLLN
RMKLARLRKQNRAATKIQSAWRGFMCFSTYLIKRYEKQAAIIIQAYWRRHWQSTNYSITY
FEIVKIQSFIRGYQERSWQSFRGVCATKIQASSRGFLARQECHNECMISILIAAAATSLR
MRNAANRLQRWWGDEMWLRREKRAALVIERFFIFVKKEVEKEVKALKRKKKEKRMRRKMK
QSDDWLLERAWLTTVEEPSIMTDERQPVAYQGYPPADRAGGKKVYTKNDRFSSENVIQSV
EDDVQSDVSGLTDLSFGNRHLIGIQARRFKQSQMEIEEETSLEEAYFDTEIQQATNRRRD
EEEYLRRNGLSKHFYKSRKQSGGYYGHR
NT seq
6387 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgcgatcacgatacctcgccgccatctcgccacgagcaggcgacgaatgcgac
agcacgccgacgtctaccagatcgagcagcctcggtcctctgtcttcatcgtccaacttt
cacaactctactgcagcgccgagcaacttcaacagcagtagcagtagaacggcgacatca
tcaacgctgaagagtcccagcaacatcatgggtcgacagcgtggcagcgttggaaatgtc
gtgattggtcagagcggacatcagcagagtatctctcagcagaagactagcagcaacagc
agcaacaacatgaaggcacctccccctcctccgccgggacctcctccaaagaaggtcaaa
aagaggggctctgtcgctggcactgtgaatttgaatgcatcgtccaatacgggcgatgtc
aacgtgagcgctggcagtggaaatgaagcgacagccatgtcccatcaacaacaacagctt
ggtgttggtcagcatactgccgatcaacaacatcctgatacaaacaagggagagacatgg
tcgcctcgtgaagagattcaagctggcaatgtggccaagtttaagcaactgctatggggt
ggcgacactgacaataacaacaacaatgcggcaatttcaactccaactcatcatcatcaa
ggcagcaaacaactacaacaaagagttcttccgccaatcactccaccccgtcctcacacg
catttcgcaacttctccagtcaccaacagcagcagcaataagggaggaggaaggagaagc
acgaggagtcccagtccgccaaagtacaagttgaatgctcctcctccgttgggtatcggt
accaacaacaatgatcacgctaatgtttctggtggaagtaatcaacatcatcaacaacgt
actccacccagatcggcaacaaacttggcacctccttcacgtgtgcttcatgctcgtggc
actcctgatcggagcaatcctagtccattgaggcaacgtttgggcaatttgactcccatt
gatacttcctttgggggtggcaagagtggaagaggagggggtgctgatagcaatagcagc
aatggcaacaatactggtggagataaagtaactccaacggcgtcgagcactcgcagtcgt
caactcggcagtcccttccacaacgatacttcaaataacaatgcagaagcagcaatcggc
aatgccaaccatgccattcacaacgccgccaacgccattcaccaccacaattctaataac
aatgcatctccatccagatcgtcccccattggaatcaccacactcacagcttttaaacga
ccacaacaaaaggtgggcatcattttcacacggaaatccaaacaatttatggatgtgcca
gttatttccaagattatgaatgattctatatttgcaggacatcatgcgaattatgggggg
aagtgtttcagtgaggcaatggggggagatggtggaatcggtggtgttggaggtggagga
ggattggaaggagcggaagtaattgcagtgaatggaactccggtgagggatcctagacat
gctgcggaattggtggccaatgctgtggatgaggttaggctgactatcaagagggtgggt
gcaggaggtggtagtgttggcgggtcgtcaccgatgccacaggcagcgacgccattcttg
gagaaagaaggagaaggacaagaagaagaagggaataggacaatagatatggatgaagag
tcagcattgtctgtcaagacggaggaggatcggaaatttgaaatctcagggagagttgga
ggattgagtgtgaatacggatagatcgaggagatcggatcagcaacagcagcagacgaca
cccaaatcgtccaagtctcaggatatcgctgaacgtcgtaggaagatagctcaggctatg
ctcatgagtgctgaaatggtggaagatcccataaattctgcatcttcgggcggtaaactg
tttggggtgatctccgaagactattgggatacatccaatcatgattggcgagagagtgtt
gaagttggaagtggaagaatcagcgctattgaggcggatagttcggagaaggaagaaaag
gatgttgtggagattgaacgcgaagtgttggcatatgatacgacaccgttgaaagaacaa
tctccggcattcacgtccccacgctctgcgagatctgcggctgagaaacggcgacaggca
gcaatgctcatgtacaactcggaaaaaatggtggatgacaatgtggatgatttacgtttg
ggcaccattgatgctattgggctaaaggatacgattagcggcccttcaccggtgcaaaag
gcggggagtgaggtttcatttgagggtaatgcttcggtggccaagacggatattactact
tcctcttcggctacgcaaaggatggggtcttctcctcataatagacagttggatgggcac
gcattctcgtttgcagagagtgcaacaagggctgttggtggtgcaggtggtgaaggacct
tctcctcgcaatccagtacgattggaaagccctgtggctcagaggaggaaggaacgtgct
cagaaacgtctcatgatggtggatcccaacgaaacgagcacagacgctccgtctcccatg
gctattggcaaaccaaacattccgatttcaaccgcagccataaaaaagcaaccaatcttg
aaaccagcaccctcaaacaacgctcctcctacacccacatctcaaattcagcgtatcgaa
accgatgagagtgttgcagcaagtagtgcagcagctgggagtagcgtcgccgcgagcaat
gtagctgcatcctcttctgtggtgtctgaagttaatggagaatctcgtactagccgaagt
atttttggaagtaagaagaagtcgtcctctcagaatgcggtgtcttctggagataagaag
aagaagaagtctatatttggtgttgccaatttgatccggaaagcaagttcgaaaaagagc
aagatatcaaagaagggtaagctcatagaagacacgatccttttccaggatagagacgaa
caagcatcttctgtcagcgtgaagtcttccacgagtgctgcttctgcatcggtccagcag
cagagtctaacaaatgatgaggtgtcgccatcgacatctgctacagttgaagctgtcaat
aataaagaaatgatgacggaaggagagtgggatgcatttgcaacctcgccatttaatgac
attgccacaaacggaggcgatgcatttggatttcctaagacgacaacctcacctgagcgt
attgatactgatgcattctttgttgagggaggagttgatgcctggggagagccatcggca
cagttgcctgttgatttcactcctcgtaaaacgaacgctggacattttcgaaaggatcct
gataatagtgatgcaatgtcctatgatgccagtgaaatgtctgaggtgacaaatccgacc
tttgctggctctaccgttcatactcggcctgatcaggagagtgacgatgttagcaaacat
tcaaacgcgaagaaggtggcaggcactggtgcatcagctaaccacaataggacctctagc
cagggttcatcatcgcaagaacagtctgagtcagcagttcctcttcttgcggaaggaaac
agttcgggtagcggggaagggggtgatgcctttgcgaggaacgcagatggaacgggttct
cagaaggagaatgatggagatactctcgcaacgatgattcgaggcaataagctgccgcct
ttgtattcgtctgagaaacgtggcgtgatcaatccatttaacccagtcgatgatcctccg
ttagctagtttggagacgttggagtccagcgaggatgaaagagccgagattgatggttct
gcgatctccaggtcagaatcctctaacatggcaaagtctcgtatcttgtccaaatacgcc
aagaacggtaagattcggaagcccattcgtgctcatgatgtgaggtcgggatccaagatg
gagccgagatctgtggtgaaagcagctccgataagcacggcactaccagtgacttcatct
caagatgtttcagcaaagcaatcggaaggacaaacttacagcatgtcattgggaagcagg
agacgccaagatactctgaaggcacaacctgattcacgtaattattctgccaatgaaagt
ccatcatcgatgatagctgcaagaccgaaccaaatgcaacaggtgcagaacgtaacacca
gacagaccagtaagtcaatccttggtttatcgtcgtaggaacggtagatcttcacccaag
tcgatggaatctggcaacgctttgagttcagaccgtagcatcagccgatactcctacaac
atcaagaaaaagcaggcaccttccctcattgatgatcccaattactactcgatggagaat
cgcttgatgcaaatcaatgatccaattcaacgtgccggagtacgtttgctgtgggctgca
gctattcccatccagactcaatcacgtcggtttctcgctcgtcaaaatgccatcaaaagg
atgtgcgctatcttgacgatccaagcattctccagaaggtggctcgctgaaagagacttg
gaaatcgccatttggtcggccatccaaatccaggcagctttccgtggatggtttgcgagg
gacagcttggaggacaaccactactgtgccactcaaatccagcgcatagtccgtggatac
ctttcaacgatgcacgtatttgaggatttgtacagcattaccattgtccaaagtgtcgta
cgaaggcatcttgcaatcaataacgcggttgatcggctgtctagtatcattgcaatccag
tcctggtatcgtggagtgagggctagaagcattttatgtgagcaggagtacagtgctatt
gcaatccaggcgaattggaggcgttatctcgctcagatgtcatttcaatttgatataatt
gatatcatcattgtacaaagtattgtgcgtcggcgaaagggaatccaaacgcgaaaaaat
ctgtgtgccacgaagattcagtcggcatggcgttcgtatgactgcagtatggcatatgtt
cacaccttggctgatgtcattactgtgcagagtgttgtcagaaggtggcagactgtccgt
tttcttgctgcagtacgtgttcaatgcctcatgcgaatgttcctcgccaaaaagtcattc
gcggaggagatgtcaatgtacactttggttacgaggcatgcatctgccaccaaaattcag
gcttcttggaggtcttactgcgcacaggtgcagatgcttctcgatcttgtcaacgtcatc
gtcattcagagtctttggcgtcggagatgtgtcgttgttttgtatgggcctctattgaat
aggatgaagcttgcgagacttcgaaagcagaatagggctgcaacgaaaatacagagtgca
tggcgtggattcatgtgcttctcgacctatcttatcaaacgttatgagaagcaagcagca
attattatccaagcgtattggagacgccattggcaatctaccaactattccattacgtac
tttgagatcgtcaagatccagtctttcatccgtggatatcaagagaggtcttggcagagc
ttccgcggagtgtgtgctaccaaaattcaagcttcgtcacgaggcttcttggctagacag
gaatgccataatgagtgcatgatatctatccttattgcagcagcagccacctcactccga
atgaggaacgcagctaatcgtttgcaaagatggtggggtgatgaaatgtggctgcgtcgg
gagaagcgggcagctttggtgattgagaggttctttatctttgtgaagaaggaggttgaa
aaggaggtcaaggctttgaagaggaagaagaaggagaagcgtatgcgtcgtaagatgaaa
caatcggatgactggctcctcgagcgagcttggcttaccaccgttgaagagccatctatc
atgactgatgaacggcaacctgtggcttaccaaggctatcctccggctgatcgtgctggt
ggcaagaaggtctacacgaagaatgatcgcttctcatctgagaacgttattcaatcagtg
gaagatgatgtgcagagtgatgtttctggattgacagatctcagttttggcaatcgtcat
ctcatcggtatacaggctcgcagatttaaacagagccagatggaaatcgaggaggagaca
agtttggaagaggcgtatttcgacacagaaatccagcaggctacgaatagaagacgggat
gaggaagaataccttcgacgcaatggactatccaaacacttttacaagtctcgaaagcag
agtggaggatattatggtcatcggtga
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integrated database retrieval system