Thalassiosira pseudonana: THAPSDRAFT_21612
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Entry
THAPSDRAFT_21612 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_4
ATP-grasp_3
GARS_A
CPSase_L_D2
RimK
ATPgrasp_Ter
LAL_C2
Dala_Dala_lig_C
Transposon_TraM
T4_Cef
Motif
Other DBs
NCBI-GeneID:
7441721
NCBI-ProteinID:
XP_002288173
JGI:
21612
UniProt:
B8BWX4
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Position
3:221292..224928
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AA seq
957 aa
AA seq
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MMNPSQSLILIVDPYSTGCMVAQEISKRGYPVMAIWTKGFSDEMKTHVPVSCRDLKYVAQ
VQDEEGWDLNDLEKAVKATAVSAANKIGRGEDYYTIVGCIAGGEAGVDVADAFSEHLGVL
SNGAKGDFANRRDKKVQQELVRSAGLRAVRQACGEKFEDVEEFLKSESYPVVLKPTDSAG
SDGVKLCHTYEEAKAHFAYLLTVEAVNGGFNTQVLCQEFLRGNEYVIDHVSRNGVHKTMM
VWVYDKRPRNGSQFVYFGMIPIDPMSEEAKVLIPYTRGVLDALGMVHGPSHGEVIFTEDG
PCLVEMNCRAHGGDGNWAPLARALCGGKYCQVEATADAYLDEDEFNKLPDTPPSPLQAHG
LEVNLVSYSKGKVKSMPGFDVIKKLPSFVWLSPAASIGSEVNFTVDLISSPGCCVLMNSD
KAVLQKDLDFIRYLEEINGLFVYETKGASLARPTAATFGLGTLPEGKKLHRRAMTIDRPG
MLRIMSSDRPELRGGLMKRFTTIDASKEVAVVVDPYSTGCLIAKEIQNRGYKVIALWTKG
FSDEMKLHVPLSCGKITYHAEVTEGDDLGETTRALYTAAGQLRIVCCIAGGEAGVDAADL
LSERLQVRTNGAQGVFANRRDKKVQQELIAQAGIRSVRQAAGKKFEDVREFLLKEEYPVV
LKPTDSAGTDGVKLCHDFDEAREHFENLFEVEAVNGGYNTEVLCQEFLRGKEYVVDTVSR
DGEHKCMQVWCYDKRAANGAAFVYFGMLPVDSASSEAKLLMNYAFRVLDALEMKNGPGHA
EIILTASGPCLVEMNCRAQGGDGNWRPLARALTGGYSQVESTVDAYLDKKAFAITPTTPP
SPARAFGQEVILVSFASGEVVGTPGYDVIKNLESFVFLETGVSVGSNVEHTVDLLTSVGS
AILLHSDEEVVKRDIETIRALEKNNELFEFGVSATGLRASMSTLNLSKMTISDNVNM
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatccctctcaatcgctcatcctcattgtggatccatattccacgggatgcatg
gtggctcaggagatctccaagcgtggataccccgttatggccatttggaccaaaggattc
tcagatgaaatgaaaacacacgtccccgtgagctgccgtgatctcaaatacgttgctcaa
gttcaagatgaagagggatgggatttgaatgaccttgaaaaggcagtaaaggctactgct
gttagcgctgccaacaagattgggaggggggaggactattatacgattgtcgggtgtatt
gctgggggtgaggctggtgtagatgtggctgatgccttctcggagcatttgggagtgttg
tctaatggtgccaagggagacttcgcaaatcgcagagacaagaaagtacagcaggaactt
gtgagatcagctggtttgcgtgcagtgaggcaagcctgtggtgaaaagtttgaggatgtg
gaagaattcctcaaatcagaatcatatcctgtcgtgttgaagcctacggacagtgctggt
tcggatggagtaaaactgtgtcacacgtatgaggaggcaaaggctcactttgcttatttg
ctcacggtggaggctgtcaatggtggattcaatacacaagttctatgtcaagagtttcta
cgtggaaatgagtatgtcattgatcacgtcagtaggaatggagtgcacaaaacaatgatg
gtttgggtatacgacaaaaggcctcgcaatggatcgcaattcgtctactttggaatgatt
cccattgatccaatgagcgaggaagctaaagtgttgattccatacacgaggggagtgttg
gatgcactgggtatggttcatggaccaagtcacggagaagtcatcttcacggaggatggt
ccttgtttggtggaaatgaattgccgtgctcacggaggagacggaaactgggctccattg
gcccgtgctctatgtggaggaaagtactgtcaggtggaggctactgcagatgcatacttg
gatgaagatgaatttaacaaactgcccgatactccgccttctccattgcaagctcatgga
ttggaggtgaacttggtgtcgtactccaaaggaaaggtaaaatcaatgcccggttttgat
gtgatcaagaagcttccgtctttcgtttggttgtcgccggcggcatcaattggatctgag
gtgaactttacagtggatttgatctctagtcctgggtgttgtgttttgatgaatagtgac
aaggctgtgcttcaaaaggaccttgactttatccgttacttggaagaaatcaacggtctt
tttgtatacgaaacgaagggggctagtcttgctcgtcctacggctgccacgttcggtttg
ggaactcttcctgagggcaagaagcttcatcgtcgagcaatgacgattgacaggccggga
atgctgcgtatcatgtcttccgatcgtcccgagttgcgaggtggtttgatgaagaggttt
acaaccattgatgcatcgaaagaagtggccgttgtggtggatccgtactcaacaggctgc
ttgattgccaaggagattcagaaccgcggatacaaagttattgctttgtggacaaagggc
ttttcagatgagatgaaactccacgttcctcttagttgtggaaagataacttatcatgcc
gaagtgacggaaggtgatgatttgggagagacaacacgtgctctgtacacggctgctgga
caacttcgtatcgtgtgttgcattgccggaggagaggcaggtgttgatgctgccgatttg
ctcagcgagaggctgcaggttcgcaccaacggtgcacagggagtctttgcaaaccgacgt
gataagaaggtgcaacaagagctcatcgctcaggctggtatccgaagcgtgagacaggca
gctggaaagaagtttgaggacgtgagggagttcttgctcaaggaagaataccctgtcgtg
ttgaagcctaccgactccgcgggaactgacggagtgaagctttgccacgactttgatgag
gcaagagagcactttgagaatctctttgaggtggaggcagtgaacggaggatacaacacc
gaagtcctgtgtcaagaatttctcagaggaaaggagtacgtcgttgataccgtctcaaga
gacggagagcacaagtgcatgcaagtctggtgctacgacaagagagctgcaaatggagct
gctttcgtctactttggtatgctcccagtcgacagtgcatcctcggaagcaaagctgctc
atgaactatgcattccgtgtccttgatgcacttgagatgaagaacgggcctgggcatgcc
gagatcattctcacagccagtggtccgtgcttggttgagatgaactgtcgtgcacaagga
ggcgacggtaattggagacctcttgcacgtgcactgacgggaggatactctcaagtggaa
tctaccgtggatgcatatctcgataagaaggcatttgccattacgccgacaactccgccc
tcccccgctagagcttttgggcaggaagtaatccttgtttcttttgcatcgggcgaagtg
gttgggactcctggatacgatgtcatcaagaatctggagtcgtttgtctttttggagaca
ggagtcagcgtcggatcaaatgtggagcataccgtggatctcttaaccagcgttggaagc
gctattcttcttcactccgatgaagaagttgtaaagcgagacattgagactatccgtgct
ttggagaagaacaacgagctgtttgagttcggtgtatcggcaactggattgcgggcgtca
atgtcgaccctcaacctatcaaagatgaccatctcggacaatgtgaatatgtag
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