Thalassiosira pseudonana: THAPSDRAFT_21756
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Entry
THAPSDRAFT_21756 CDS
T01078
Name
(RefSeq) predicted protein
KO
K04523
ubiquilin
Organism
tps
Thalassiosira pseudonana
Pathway
tps04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
THAPSDRAFT_21756
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_21756
03051 Proteasome [BR:
tps03051
]
THAPSDRAFT_21756
Membrane trafficking [BR:
tps04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
THAPSDRAFT_21756
Proteasome [BR:
tps03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
THAPSDRAFT_21756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD_2
UBA_7
XPC-binding
Dsc3_N
UBA_HOIP
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
7451655
NCBI-ProteinID:
XP_002288828
JGI:
21756
UniProt:
B8BXT6
LinkDB
All DBs
Position
3:complement(979588..982236)
Genome browser
AA seq
592 aa
AA seq
DB search
MTGDVSTGNRNASLTLTIRLTTSVRFTIGSGSDANNSITPSSTVRRVKEIISQCQECEFC
AVERQRLIYRGRILSENDRTLADYGIGTGGGAAGDGIVLYLVIGSAPSGGGGVSSPTQPA
SDQPTSPTQDPYNPFGNLSQMMSNMNNNNGAPDLAAFQQQMQQNPNMMNAMMNNPMVQSM
LSNPDFMRNMMENNSMMRGLMESNPELRHALEDPELMRRSLEMMRDPSAMQNAMRNQDLA
MSQIENMPGGFNALRSMYENVQEPMMDAMSGGGGGANASGSSSNSVQSGGNSQGAANQAM
PNPWGSPTSTTANGNNPAAPVNPFASFGGMGGLGMPNMGGGGGGSNPWANPPDTQQLEAT
LQMMENPMMQQMMQQFMSDPEALRQMMESNPMMRQLRETNPQAAAMMSNPEVMRSMMNPD
TLRSMLQLQRTFGGMQPGVGGSAQSRPPAGGLDFSSLLGGGAAPPAGGGAFGTAPNPFLS
FPFGAPQQPASQQHHQPAPGERFRHQLQNLNDMGFTDRSANIRALTSGHGNVNRAIEILL
ENPPEMGGDDVEPATASAAGAGGDAMGSNDTAGGEGAGESSEPKGNSEKKND
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgacaggggacgtatccaccggcaaccgcaacgcctcactcacactcaccatccgtctc
accacctcagtccgcttcaccatcggatcaggatccgacgccaacaacagtattaccccc
tcctcgacggttcgtcgggtgaaggaaattatatctcaatgtcaggaatgtgagttttgc
gcagtggaaagacagaggctgatttaccgggggaggattttgagtgagaatgataggacg
ttggctgattatggtatcgggactggcggcggcgctgctggtgatgggattgtattgtac
ttggtgattgggagtgctccgtctggaggagggggtgtatcatcaccgacacagcctgcc
tcagaccagcccacctctcctacccaagatccctacaatccattcggcaacctctcccaa
atgatgtcaaacatgaacaacaacaacggagcaccggacctagccgcctttcagcaacaa
atgcaacaaaaccccaacatgatgaacgccatgatgaacaatcccatggttcaaagtatg
ctcagcaatcccgacttcatgcgcaacatgatggaaaataatagtatgatgcgtggactc
atggagtcgaatcctgagttacgtcatgcgttggaggatccggagttgatgaggcgttct
ttggagatgatgcgcgatccttctgcgatgcagaatgccatgagaaatcaagatctagca
atgagtcaaattgagaatatgccgggaggtttcaatgcattgcgtagcatgtatgagaat
gtgcaggagccaatgatggatgcgatgagtggaggtggaggaggagcgaatgcaagtgga
agtagcagcaatagtgttcagagtggagggaattctcaaggagcagcaaatcaagcaatg
ccaaacccatggggatcacctacttccactactgcaaacggcaacaaccccgctgctcct
gtgaatccattcgcttcgttcggaggaatgggaggattgggaatgcctaacatgggagga
ggaggaggaggaagcaacccatgggccaatccacccgacactcaacaactcgaggcgact
cttcaaatgatggagaatccaatgatgcagcaaatgatgcaacaattcatgagtgacccc
gaagctttgaggcagatgatggaatcaaatccaatgatgagacagttgcgagaaaccaat
cctcaggctgctgctatgatgtccaaccctgaagttatgaggagcatgatgaatccagac
actcttcgctccatgcttcagttgcagcgaacttttggtggaatgcaacctggtgttggc
ggaagtgctcaatcacggccacctgctggaggacttgacttctctagtcttctcggcggt
ggcgctgctcctcctgccggtggtggagcatttggaactgcacccaaccccttcttgtcc
tttccttttggtgcacctcaacaacctgcttcacaacaacatcatcagccagcaccagga
gaacgtttcaggcaccagcttcaaaacctaaacgatatgggattcactgatcgttcagcc
aatattcgtgcattgacgtcgggacatggcaacgtgaacagggcaattgaaattctgttg
gaaaatccaccagagatgggaggagatgatgtagaaccagcgactgccagcgcggcaggt
gctggtggagatgcgatgggaagcaatgatactgctggtggtgaaggggcaggggagagc
tctgaacccaaggggaactctgagaagaaaaacgattag
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