Thalassiosira pseudonana: THAPSDRAFT_21769
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Entry
THAPSDRAFT_21769 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltransf_21
zf-C2H2_4
Methyltransf_23
Teflon_N
FlaA
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
7451668
NCBI-ProteinID:
XP_002288342
JGI:
21769
UniProt:
B8BXW4
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Position
3:<1047029..1051007
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AA seq
1310 aa
AA seq
DB search
MSLHHNERYRRSHHNKRSTHSSERQPTSKHVASHPREESLDGLLLAKGGGEDAVVAWCAV
GFGGAHGYFGVVYCHFLLLLLWALASVSHRGRCSWCTTARQVAGAKWGSMQLVTRKIYIV
SDLDTFTQPPDFLSASHKHISAAALTGGIVAVHTSRHCRVMFNTWKLFIWWCSLALSSLA
LTLAWTPSSSLSSHHASTGLRRGVIGGRRLLSTMTSSEEKQEEEKQRQQQKPVLECQFCR
QPFKSRNALFRHLKGEDEDGYDCFVAASKLGGMEAPPSEKEVSLTAVFRYGYLVNENSST
ELNTSTDVESNEGYNDVVANMIHQAFVDIVNERLLVGENGTITTSALSSSTAAKLRQPSL
RQDEGVLGATAEVFSFNYKLSVPFSSTSGAALKKWKEYSSSDAILEDMQSRLSSNSIQIQ
LHHMDAITPRSFKFYGERGCSQRVYRYLLPLEWLRFGEKYDSDSDAQLLQWAKGIAAKSL
SPSTHRPRKSKSSLAAPECILKLKSALRSAESRTIANRRTRRQEARNSDEETSDGENVIE
SETPIDQSTDIVLTNTGPIRLAPGRFGLLWRKERRCWSNFAHPALRGMASSPGSETSWRT
LDRAHIVGFVDRGISEGEDQESGIQNIHAILEFTGDGFLLGQIPRIISTIIAMTNGWLPS
TFFDVATRPDIYIAAPPMVPLAGRMYFHSPRYHFHELTAKGSDGATGFEGTINADLKKEN
EWEVGLRSSVLDRSSQAKAKDEDWLLELRDTITPTILKQLETIAKSVSTTTKEKDNAASS
SEIDSDLDHGTDDDAPSVAYTNTLNLLRDVVANGWPATSIARSRVIRTPSSSTGSSDRAI
LATKKGSVASTFPGVTLSAGSFTVVNEDKWKSEDGIPLGNTLFPELSRSVFLLEQAIIDA
TTPPIPSADGMHRQDLSRRTISTHCAVNRNAQFTPHVDSGRGAGQSVSMILGLGNYAGGE
IIVEGTEYDIRYNALEFDGWKQLHWTAPFSGERFSLVWFTPDMKEQLDSSQPTDTNNDED
EQANILVDEHSKVLPYLPPLKFRPHSTDALVINELLDREKGCAYTMQSSVPFSFTLDDHN
CVLDIGAHIGVFSRYALEMGCNHVISYEPEPSNFELLTYNLGTIDSLTDAPHPTIELHRA
AVAQGNAASGTLVRARNQNNGRLNTWRHSLSEHSQYVDRSTKLPSDTQKGLLERFDVQCV
PFFSEDGRQGALVPGVTFVKLDNEGSEIDILLSPKASERSSWLDITQLVVEWSFTKERRV
DVFHQMIQNLREAGFEVFYEGMGSWWDGAGILWPFPNDIVVFASIRDGEC
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttcatcataacgaacgttaccgccgatcccaccacaataaacgcagcacccac
agcagcgaacgacaaccgacgtcgaaacatgtagcttctcatccacgggaagagagtctt
gacggactcttgcttgcgaaaggaggaggggaagacgccgtcgttgcttggtgtgctgtc
ggtttcggtggcgcccatgggtacttcggtgtagtctattgtcattttttgttgttgctt
ctttgggctttggcttctgtttctcatcgtgggagatgctcgtggtgcacaacggcgaga
caggtcgcgggggcgaagtggggttccatgcagcttgtcactcgaaagatctacatagta
tccgatttggacacttttactcaaccaccagatttcctttccgcgtcacacaaacacatc
agcgcagcagctttgaccggtggcattgttgcagtacacacatcaagacactgcagggtc
atgttcaatacatggaaactcttcatttggtggtgctcattggcgttgtcatctttagcc
ctaaccctagcgtggacgccgtcgtcctcactgtcatcacatcacgcgtcaacaggccta
cgtcgtggtgtcatcggcgggagaagattactgtctaccatgacgtcaagcgaggagaag
caagaggaggagaagcagcggcagcagcagaaacctgtactagagtgtcaattctgccga
cagccattcaaatcgcgtaatgctctgtttcgtcatcttaaaggtgaagacgaagacgga
tatgactgcttcgttgcagcgagtaaactgggagggatggaagctccaccatctgagaag
gaagtatcgcttactgcagtgtttcggtatggatacctcgtcaacgagaactcatctact
gaactcaatacaagcaccgacgtagaaagtaatgaagggtacaatgacgttgtggcaaat
atgatccatcaggccttcgtagatatcgtaaatgaacgtcttctggtgggggagaatggt
acaatcacaacatctgctctcagctccagtacagctgcaaaactaaggcaaccatcactg
agacaggatgagggggtacttggagcaactgcggaggtgttctccttcaactacaagtta
tctgtacctttctcaagtaccagtggtgctgcgttaaagaaatggaaagagtactctagc
agcgatgctattcttgaggatatgcaatctagactgagttcaaatagtattcagatccag
ctccatcacatggacgcaataactcctcgttcgttcaagttctatggagaacgtggctgc
tcacagagagtgtaccgctacttgctgccgttggaatggcttcgttttggagagaagtac
gatagtgacagtgatgcacaacttttacaatgggcaaagggaatcgcagcaaagagtttg
tctccaagcacgcataggccacgcaaatccaaatcatcgttagcagcacctgaatgcatt
ctgaaactgaaatcggctcttaggtcagcagagagccgcactattgcaaatagacgaacc
cgtcggcaggaggcacgtaattctgatgaggaaacaagtgacggtgagaatgtcattgaa
agcgaaacaccaattgatcagagtacagatatcgtacttaccaacacagggccaatccga
cttgctccgggacggtttggtttgctatggcgaaaggaaagacggtgctggtcgaacttt
gctcatcctgcactgagaggtatggcctcgagcccgggatccgagacgagttggagaact
ctggatagagcacatattgtcggctttgtcgatcgtggcattagtgagggtgaagatcaa
gagagtggcattcaaaacattcacgcaatacttgaatttacgggtgacggatttctcctt
ggtcagatcccaagaatcatttccaccatcattgcaatgactaacggatggttgccttca
accttcttcgatgttgccacacgacctgatatctacattgcagcgcctccaatggtacct
cttgcgggaagaatgtactttcattctccacggtaccactttcatgaactgacagcaaag
gggtcagatggtgctactggctttgaaggaacaatcaatgctgacttgaaaaaagagaat
gaatgggaggttggattgcgcagttcggtgttagatcgttcttcacaggccaaggctaaa
gatgaggattggctgttagagctacgcgatactataactccgacgatactcaaacagttg
gagacgatagcaaaaagtgtcagtacaaccacaaaagagaaggataacgcggcatcgtct
tcagagatagattcagaccttgatcatggcactgatgatgacgccccttcagttgcatat
acaaacaccctgaacttgctcagagatgttgtcgcgaacggatggcctgcaacatctatt
gctcgttctcgtgtgatacggactccttcgtcttccacggggtcatcggatagagctatt
ctcgctacaaagaagggctccgttgccagtacgttccctggtgttacactgtcggcgggt
tcatttactgttgtcaatgaagataagtggaagagcgaagatggcatacctctaggaaat
accttatttccggagcttagtcgttctgtattcctactagagcaggcgatcatcgatgca
acaactcctccaattccttcagcagatggtatgcacaggcaagacctcagtcgtcggact
atctctacacattgtgcagtgaataggaatgctcaattcacacctcacgtagactctggt
agaggagccggacaaagcgtgtcaatgattttggggttaggaaattatgctggtggtgaa
attattgtggagggaactgagtacgatattcggtacaatgcgctggaatttgatggatgg
aaacaactgcattggacagctcctttctctggtgagcgtttcagccttgtgtggtttacc
ccagatatgaaagagcaattagattcgtcgcaaccaaccgatacaaacaacgacgaagac
gagcaagcgaatatattggtggatgaacactcaaaagtacttccatatttgcctccattg
aagtttcgtccacactctaccgatgccttggtcattaatgagctattggatagagaaaag
ggatgtgcatacacgatgcagagcagtgtgccattcagctttacgctcgacgatcacaac
tgtgtgttggatataggagctcacatcggagtcttttcgcggtacgctcttgagatgggt
tgcaaccacgtcatttcgtacgagcctgagccaagcaactttgaactcctgacgtacaat
ctgggcaccatcgattctcttacagatgctccacaccctacaattgaactacatcgtgct
gccgttgctcaaggaaatgctgcttcgggtacacttgtacgagcaaggaatcaaaacaat
ggaagactcaatacttggcgacactccttatcagaacacagtcagtatgtcgatagatca
acaaagctgccttctgatactcaaaagggactgcttgaaagatttgacgtgcaatgcgtt
cctttcttttctgaagacggtaggcagggtgcacttgttcctggcgtcactttcgtaaag
cttgacaacgaaggatccgaaattgacattctcttatcacccaaagcatcagagcgatca
tcatggctagatatcactcagttggtcgtggagtggtcgtttacaaaggaacgtcgtgtc
gatgtttttcatcaaatgattcagaacctgagagaagctgggttcgaagtcttttacgaa
ggaatgggatcttggtgggacggagcaggcattttgtggccgtttccaaacgatattgtt
gtattcgcctccatacgtgacggtgaatgttaa
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