Thalassiosira pseudonana: THAPSDRAFT_21858
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Entry
THAPSDRAFT_21858 CDS
T01078
Name
(RefSeq) ABC transporter
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
ABC_tran_Xtn
SMC_N
AAA_23
AAA_29
AAA_22
MMR_HSR1
Dynamin_N
MeaB
RsgA_GTPase
AAA
AAA_27
AAA_33
SpoIVA_ATPase
nSTAND3
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
7449500
NCBI-ProteinID:
XP_002288927
JGI:
21858
UniProt:
B8BYF0
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Position
3:complement(1486178..1488485)
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AA seq
668 aa
AA seq
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MAIISKLASKAAIVSLVASSSFYNDNVSTAFAPSVASIANRPSLYPPLIPSVRTTMSTSQ
LHAKKKKGNTPRPNPNYGKQQKQEKASVKEAKFDAATRQFQFTLVGLTKTLPDKSKDILK
NINLSFYPGAKIGVVGLNGSGKSTLLKIMAGVEKEFDGTARPLPGSSIGYLPQEPRLEYE
TVKECIDSAVASSRAILDTYNELSLSMADPNLTDEEMTSAMNQLEAIGDKIEAENLWELD
RMVERSLTLHWFGIYYFRAMDSLRVPPGDAKTAVLSGGEKRRVSLCQLLLESHDMLLLDE
PTNHLDAESIAWLEQFLDQFKGTVVCITHDRYFLENVAQWILELDRGQGIPFEGNYSQWL
EAKNNRLEGEKKSQTAAAKAVAAELEWVRSNPKAKGTKSKARLKRYDELLLAAAPTELRN
EGQIYIPPGPRLGDVVIDVSGVKKTFGDRMLMQDVEFSFPKAGIVGVIGPNGAGKSTLIK
MLMGKEEPDAGEIKIGETVSMVGIGQDRMEQLDDKKTVYEEISGNMDEIELGGNYVNSRA
YVSWFGFKAGQQQQSVANLSGGERNRVQLAKLLKSGANLIILDEPTNDLDVETLRSLEEA
LLNFAGCAMVVSHDRYFLDRIATHILAFEGDSNCFFFEGNYADYEENRVQRLGETSIKRI
KYAPLINA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggcaatcatttccaaactcgcctccaaggcagccatcgtttcactcgttgcatcttca
tcattctacaatgacaacgtatccacagcctttgctccatcggtggcatcaattgcgaat
cgtccatcactctacccaccactcatcccgtcagtacgcacgacgatgtctacgtcacaa
ctccatgccaaaaagaagaagggcaacacaccccgccccaatccgaactatggcaagcag
cagaaacaagaaaaagcatctgtgaaggaggccaagtttgatgcggctacgaggcagttt
cagtttacgttggtggggttgaccaagacattgcctgacaagtcgaaagacattttgaag
aacatcaacttgagcttctaccctggggccaagattggagtggttggattaaatggaagt
ggaaagtccacactcctcaaaatcatggctggcgtcgaaaaagagtttgatggtacggct
cgtccacttcctggatctagcatcggttatctcccacaagaaccccgcttggaatacgaa
actgtcaaggagtgcattgattcagcggtagcatcgtctcgtgcgatacttgacacatac
aatgagttgagtttatcaatggctgacccaaacttgacagacgaggaaatgacttctgca
atgaatcagttggaggctattggtgacaagattgaggcagagaacttgtgggagttggat
aggatggtagagagatctctaactctgcactggttcggtatctactacttcagggcaatg
gattcgctcagggttccacctggagatgcgaagactgcagtgttgtctggaggagaaaag
aggagagtctcgttgtgtcaactattgcttgaaagtcatgacatgttgctgttggatgag
ccgacaaatcatctcgacgctgagagtattgcttggctagaacaattcctggatcagttc
aagggaacagttgtttgcatcactcacgatcgctactttcttgagaatgttgcacaatgg
attcttgaacttgaccgtggccaaggaattccctttgaaggaaactattcgcagtggctt
gaagcaaagaataaccgcttggagggtgagaagaaaagccagaccgctgccgccaaagct
gttgcggctgaactggaatgggtgcgtagcaatcctaaggcaaagggcacgaagagtaaa
gctcgtctcaagaggtacgacgagctcttgttggcggctgctcctacagaactgcgcaat
gaaggccaaatttacatcccacccggaccaaggcttggagatgtcgtcatcgacgtgagt
ggtgtaaagaagacttttggagataggatgctcatgcaggacgttgaattttcgtttccg
aaagcaggtattgttggtgtgatcgggcctaatggagctgggaagtctacattgatcaag
atgctaatgggcaaagaggagcccgacgctggagagatcaaaatcggcgagacggtttca
atggtaggcattggccaggacagaatggaacagcttgacgataagaagacggtgtacgag
gagatttctggcaatatggacgagattgagttaggtggcaactatgtgaacagccgagcc
tatgtctcgtggtttggcttcaaggcagggcaacagcagcaaagtgttgctaatttgagt
ggaggagagaggaaccgtgttcaacttgccaaactgctcaagtcaggagcgaaccttatc
atccttgatgagccgacaaacgatctggacgttgagacactccgaagtcttgaagaagca
ttgcttaactttgcaggatgtgcaatggtagtatcacacgataggtatttcttggatcgt
attgccacccatatcctcgcgtttgaaggggatagcaactgttttttctttgaaggcaat
tacgcagattacgaggagaatcgtgtgcagaggctgggggagacgagcatcaagcgaatc
aagtatgctcctctaatcaatgcataa
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