KEGG   Thalassiosira pseudonana: THAPSDRAFT_21933
Entry
THAPSDRAFT_21933  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K03005  DNA-directed RNA polymerase I subunit RPA49
Organism
tps  Thalassiosira pseudonana
Pathway
tps03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    THAPSDRAFT_21933
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tps03021]
    THAPSDRAFT_21933
Transcription machinery [BR:tps03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Pol I specific subunits
     THAPSDRAFT_21933
SSDB
Motif
Pfam: RNA_pol_I_A49
Other DBs
NCBI-GeneID: 7445343
NCBI-ProteinID: XP_002289001
JGI: 21933
UniProt: B8BYU4
LinkDB
Position
3:complement(1845474..>1847123)
AA seq 504 aa
MATSSILRSPSKKSPKKRKHASVKNDALPPATTSIRVEVTEENKEYDPVVVSFPRGVPTS
ISNPNGDDADGDDGNPGGRLSPPKFTYSKLKASSSRGRRVTGSDESCSYSAFCAGRGHDN
RLTKLYVAVLDKRNKTLKLIPSAEKGTVFALDQEVKAYTPNVSSSSMGVGGGNDGSSKAV
SASNRVQMLVESFGSKKKQKVMASRAANVVNINSVVGAGNVMMDSVVKQGGMISEGNREA
LLDGSKVLFFPSILPNYAICFSQLNPVEVALLQSRRNTLPPFDVNADSPHKVFSAQLIAE
STAWEKCSKIVDKVLKKADETPEEHWADKLLGKGGHHESLRTLLKSINPTKKGSVHRIKT
TFLLSLIIRFHEKVSRKGGKILASSLDDCVTQVRLPAEVGPRIFELFSTPIEGREQGGYM
MSRNQADKLCVWCLILYVIAASNGKDMAVSSINQLCKDMKLDDKKAALFLREAGFVVKKN
GVGDLGVSLSVPLTFPPPKRGKKT
NT seq 1515 nt   +upstreamnt  +downstreamnt
atggcgacctcttccatcctccgcagcccaagcaagaaaagcccaaagaaacggaagcat
gcctccgtcaagaacgacgcccttccaccagccacaacgtccatccgtgtggaagtcact
gaagaaaacaaagagtatgaccctgtagtggtatcctttcctcgtggtgtaccgacatca
atctccaatcccaacggcgacgacgctgatggcgacgatggcaacccaggtggcaggttg
tctcctccaaaattcacctattcaaagctaaaagcgagctctagtcgagggcgacgcgtc
actggatcagacgaaagctgcagctactcagccttttgcgctggcagaggacacgacaat
cgtctcacgaaactgtatgtggctgtattggacaaacgcaacaagacattgaaattgatc
ccatctgccgaaaagggcacggtatttgcgttggatcaagaggtgaaagcatatacgcct
aatgtatcatcatccagtatgggcgtaggagggggcaatgatggatcgtcgaaagcagtc
tcggcttctaaccgagtgcagatgctggtggagtcgtttgggtctaagaagaagcaaaag
gttatggcaagtcgggcagccaatgtggttaacatcaacagtgtggtgggtgctggtaat
gtcatgatggatagtgttgtgaagcagggcggaatgatcagcgaggggaatagggaggct
ttgttggatggatcaaaggtgctcttttttccatccatcttaccaaactatgcaatttgc
ttttcgcagctcaaccccgtcgaagtggcactgctacaatctcgtcgaaacacgctccca
cccttcgacgtcaatgccgactcgccacacaaagtcttcagtgctcaactcatagctgaa
tctaccgcatgggaaaaatgctctaaaatcgttgataaggtactaaagaaagcggacgag
actcctgaggagcattgggcagacaaactgttaggcaagggtggtcaccacgagtcgctc
aggactcttcttaagtcaatcaaccccaccaaaaagggaagcgtacatcgtatcaagacc
acatttctcctatctttgattatcaggtttcacgagaaggtatcgcgcaagggaggaaag
attttggcatcaagccttgacgattgtgtcacgcaagtacgtcttcctgcggaagttggt
ccacgaatctttgagctattctcaactcccattgaaggacgagaacagggtggatatatg
atgtcgagaaatcaagcagacaagctgtgcgtgtggtgcctcatcctttatgttattgct
gcgagcaatggcaaggacatggcagtgtcgagtatcaaccagttgtgtaaggatatgaag
ttggatgataagaaggctgcgttgtttctgagggaggcggggttcgtggtgaagaagaac
ggggttggagatctgggtgtttcgttgagtgtgccgttgacgtttcctccgccgaagaga
ggtaagaagacttag

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