Thalassiosira pseudonana: THAPSDRAFT_21997
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Entry
THAPSDRAFT_21997 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_10
TPR_2
TPR_NPHP3
TPR_8
TPR_7
TPR_MalT
SNAP
TPR_16
CFAP70_TPR_C
TPR_6
DUF2225
RMD1-3
ANAPC5
MIT
TPR_19
SUCH1_C
ARM_TT21_4th
RMD9_mid
DUF6340
APAF1_C
Herpes_UL37_1
DUF3837
Motif
Other DBs
NCBI-GeneID:
7452105
NCBI-ProteinID:
XP_002289059
JGI:
21997
UniProt:
B8BWC6
LinkDB
All DBs
Position
3:complement(2146574..>2154971)
Genome browser
AA seq
2573 aa
AA seq
DB search
MNRLFGVWGRVSADDVVVNENDDGHSSDEDSGSEGAWEASADEANLSNEGSTSQDDAAPD
DRNEVASPDDLVDGVEEMTKEVNHEGGRGSSALAAADTADREASNGVSSVAHGFVDGVTS
DGDNEGSYRHRNNTNPTPEEVDDSFPKARDFLADLHSIASEEQSSDDHNIITNIAPEQAT
DIVTGFNDDTNYAQDEEGTITHDDSRTIATQRTIATTATRVQPVSAAFRSAQAEQTKCLH
HEHQSIFDILDRNFEELGNYTSDCWRRSSGRGGRKEIGYNDVKLCFVAFVVVFHLPAPPV
FANEGKYLEGTDVRDGDANNSDNDDDEGSKNEHQTKQNGNAAADTTKRRRPSVPLSVAFS
LWRKVLQIPDWNEDDDTTSLSYIRSALVLLGLLDLTAIEREDGTVSTTGRAGYRNSRSSI
ECLCIQHDINQQYGEYMAWGEHNDSFRTVIERHEQQWNKAVMNAAQQLGPNEYTLNMLPL
NTMRANCMQDTFDLLKDMAFVRRRIRVLGPSAAATAHVSDLDELLRLIDRRITTGGSSVE
PIDEQEGLLSAYEQMKKYCLHVTNELTKHHSADENEPPDSIAMTAGLGKAALAKIGDVGN
ALHLLGASCGGYGFFEEEMEYYKKALKLKELSVSGKIENSVSASDTLHCMGFSLDNAGRS
DEALDCYNQALEIRLECLGDNDLRVAETLHNKGALLCETEQSDEAMECLEEALRIRELHY
GEEHESCADTMQWMGNLLRKYGDTSEALDYFKFALRIKQTRLGSDDIDVANTLFNTAVLL
DDLEKYDLSLIAYKEACRIRKLVLGEDNPEVADTLFCMGNVATVVERHEEALGYFKESID
IRETLVKGDDHYTEELDDSLLFIANPSSLHPDTLFQYQKLIHCFEEALPLTKLIVGTNHS
DVCELLNRMGVIYTKLHDWDNAIGSFQGALRVKRTVAPADGDDIEVAVLLQKKGEAHLYK
QEFSRAKTTFDSALQIRERMEGRNSMSFASSAYCLGVAYYYLEDYSHARLLFQECMKVQT
KLLGESDVHIARSLCWLGRNNEQLQDPSKALERYLSALQICKKNKSLLDYRVVAMLLHAI
GKAYEDEKLAQPDMALRCYIEEINLIQSKLNTDDVETNKLLSEAHFNAGVLYQKDHDLDK
AIDQLKKSLELTRQCNDADCIRVATITDQLGVMYSSQEKCDVAKGLGECLEKVGSDLALD
FFKESLRVHRLNVSEDDERVTDILFCLGRVYSDRCAYVDAANSFEEVADTYHQLGNAQSQ
LRQYEKTLIYHRESVRINRKIEEKDALYKVSLDMAKCCEKMNNFELAIECYNDCLRGTEE
LNDNNNIAIVLRRMGEIQMNKLHNYADAIKLFLDALELLRSEGDDGSGDEEQSILGLLPI
IGEAYALAKDYENALDFFEEHIKGVESATPVNEALVAESLYAMGVIFANMDENSDYELAI
EKLEECWNIKKELFGPDDERVADVVYTIATVYEKEENIDKAVELLSIALRTYKMKRNKHD
TSKTYHALAKLKASSSAKSGVELDHIAALECYEEAIKERRKVAVLDDIVLASMLYEYATI
LCARSDYDTAMPLLEEALRIQKVKKGLKDDQVANILLRTAEVHIHNGKYDASLVSLEQVL
FIHNALGEAVDIDLGLCHHLLSSTYLARGNYEKAVESSLESLKWKRDEFGHNSLECASVH
NNLGKAYGKLNEFDKAIESLVEALRIRKIELGNDSLEYGDTVLSLAELHVAMGKHSQALN
CLVEAIRVFEMFPEVDINQVVEAMEMKGDAHSSLKDYYDAAASYRECIDIYEDSSDVSAS
EEYVATLNHKLGKALASIHEYDEAFAAYRVSIKKFSSALGTDNLRVADVMHDVGLLTLGD
GAIEKAVQCFNETTRIYTLHGEQNSTKVADTLVQLGTIHTDQSENDEAMQVFEKAIKLYK
EKLGGDAVEIGRALLLVGRLHDIRGEYDKSMSSFTEALRTFKSSLSEDDMSISLALSNIG
IVHSRRKEYSDAVEMCIEALRIRKIHTENDEDVADSLFNIGNIYDEWGKQDDALPYFEGA
LKLYRLLLGDEDITVANCQQRLGAIYWVQKKVEKSLDSFCIALSICEKVVDDVEHLLLPI
YKGLGGCYFSQEEYDKALDNFAFCLKIQKTELGDDSIEMATTCNIIGLIYQKKEKPLESI
NFHIKALQIYEKHRDKGSKDCIFSHIQLSKALLASGQCDNSISRLRECLAVYSKDGDENR
EEIAAVYHQLGIAQNKLVEYEEAIDSLNKALDIRIRVFGKADAKVAVTLLDLGKVLQEWG
DLDEAIGVYDQAITIFQKTDCDKYTVADTYSQVAELFIEQEKHDSSLDSLKKALKLYSSH
CGSDSYEVAKTLLQIGKEYVQLDNMEKSTGCFSEAVKILRSCDGDNDILISQALSSLGQN
YARKKMYAKAIEMSTEALRIQKQHGDEFVSIADTLSTIGNILDEWGKVEQALQFYEEALR
LYENAVGLDSVEVANCQYNVALIEKKLGESEAALLNFGQALRTHRTKEGDKSLGVSNDLY
QIGEIYDSFGDKEKALQCFQECLKIRKENFSDDHLDVLAARRYVDTLRRRLRY
NT seq
7722 nt
NT seq
+upstream
nt +downstream
nt
atgaaccgtctatttggcgtctggggcagggtcagcgccgatgatgttgtagttaacgaa
aacgacgacggtcacagctcagatgaggatagtggcagcgaaggtgcatgggaagcgtct
gcagacgaggccaaccttagcaacgaagggtcgacgtcacaagacgatgcagctccagac
gatagaaatgaagtagcgtcaccagatgatttggttgatggggtggaagaaatgacaaaa
gaggtaaatcatgaggggggccgcggtagttcagcacttgctgcagctgacactgctgat
agagaggcatccaatggagtctcttccgtagcacatggcttcgtagatggcgtgaccagt
gatggagacaacgaaggcagctaccgccaccgcaataataccaaccccacgccagaagaa
gttgacgattcatttcctaaagcaagggactttctagcagacttgcacagtattgcaagc
gaagaacaatcatcagatgaccacaacataataacaaacattgcccccgaacaagcaact
gatattgtcactggcttcaacgacgatacaaattacgcacaagacgaggaagggacaatc
acccatgatgattctcgtaccattgccactcaacgaacgatagccaccactgccacacga
gtacaaccagtatcagcagcatttagatctgcccaagcggaacaaaccaagtgtctacat
catgagcatcaatcaatctttgatatattggatagaaactttgaagagctggggaattac
acaagtgactgttggagaagaagtagtggcagggggggacggaaagagattggatacaat
gatgtcaagttgtgctttgtggcatttgtggttgtgttccacttgccagcaccacctgta
tttgcaaatgagggcaaatacttggaggggactgatgtgagagacggtgatgccaacaac
agcgacaacgacgacgacgagggttccaagaatgagcaccaaacgaaacagaacggcaac
gccgcagcagataccacaaaacggcggcgtcccagcgttcctctttctgtcgctttttca
ctttggagaaaggttcttcaaatcccagattggaacgaagacgatgacacaacaagtctc
tcctacatacgcagtgcgctcgttctgctcggattgttggatcttaccgccattgaaaga
gaagatggaacagtatccactacaggaagagcaggctatcgaaatagcagatcttccata
gaatgcctctgtattcagcatgacatcaatcaacaatatggagagtacatggcgtgggga
gagcacaatgactcgtttagaacagtgattgaacgacacgaacaacaatggaacaaagca
gtcatgaatgcagctcaacaattgggtccaaatgagtacaccctcaacatgctaccactc
aatacaatgcgagcaaactgtatgcaagatacgtttgatcttttgaaggatatggcattc
gtccgacgaagaatacgagtacttggtccgtcagcagcagccacggcacatgttagtgat
ttggacgaactattgcgtctcatcgataggagaatcacaactggtggttcttcagttgag
ccgatcgacgagcaagaaggtcttttgagtgcatatgaacaaatgaagaagtactgcctc
catgtcacaaatgagttgacgaaacaccacagcgcagatgagaatgagcctcctgatagt
attgcgatgacagctggattaggtaaagcggcactggccaagattggagatgtcggaaat
gcacttcatctcttgggtgcatcgtgtggaggatacggctttttcgaagaagagatggaa
tattacaaaaaagccttgaaattgaaggagttgtcggtgagtggcaagattgagaattcc
gtgtctgcgtctgatacactccattgcatgggtttctcgttagacaacgctgggagaagc
gatgaagcattggattgttacaatcaagctcttgaaatacggctggaatgtctaggtgac
aacgatttgcgtgttgcagaaacactgcacaataagggtgcactattatgcgagacagaa
caatcggatgaagcaatggagtgtttagaagaagcacttcgcattcgtgaactacattat
ggcgaggaacacgagagttgtgccgacacaatgcaatggatgggcaatttgttaaggaag
tacggagatacatcagaagcattggactatttcaagtttgctcttaggatcaagcagact
agattgggcagtgatgatattgacgtcgccaatactttattcaacactgcagtactgctt
gacgatctcgagaaatatgacttaagcttgatagcatacaaagaagcatgcaggataagg
aagctcgtattaggcgaagacaatccagaggttgcagacaccttgttttgcatgggaaat
gtggcaactgttgtagaacggcacgaagaggcattgggctacttcaaagagtcaattgat
ataagggagactctggtcaaaggggacgatcattatacagaagagcttgacgactcgttg
ctgttcatcgcgaaccctagctcactacatcccgatacgctgtttcagtatcagaaactt
atccattgctttgaggaggctttgcccttgacaaagttgatagtgggaaccaaccacagt
gatgtgtgtgagttgttgaaccggatgggagtgatatacacgaagcttcatgattgggac
aatgctatcggtagctttcagggagcgttgagagtaaagcgaacagttgccccagctgac
ggtgatgacattgaagttgcagtactacttcaaaagaaaggcgaagctcatttatacaaa
caagagttcagccgagcgaagactacgtttgactctgcattgcaaattcgtgagaggatg
gaaggcagaaattcaatgtcgtttgcatcgtctgcatattgtcttggtgtggcttactac
tatttggaggattattctcacgcgaggctattgtttcaggagtgtatgaaagtgcaaaca
aaacttttgggagagagtgatgtgcatattgcaaggtctctttgctggttgggaaggaac
aacgaacagcttcaagatccaagtaaagcgttggaacgttacctctccgctcttcagatt
tgcaagaagaataagtcattacttgattatcgggtcgttgccatgctactgcatgcaatc
ggaaaggcctatgaagacgaaaagcttgcgcaaccggatatggcactgagatgctacata
gaagaaatcaacttgatccagtcaaaactaaacaccgatgacgtcgagaccaataagctc
ttgtccgaggctcatttcaacgctggagtgctgtaccaaaaagaccacgacctagacaaa
gccattgatcagttgaaaaaatcgctggagttgactcgtcaatgcaacgacgcagattgc
attagagtcgccacaatcactgatcaattgggtgtcatgtactcttctcaagagaaatgc
gatgtcgccaaagggttaggcgaatgtcttgaaaaggtgggatctgatctagctttggat
ttcttcaaagaatcgcttagggtacatagattgaatgtcagcgaggatgacgaaagagtc
acagacatcttgttttgtttaggaagagtatactctgacagatgtgcatacgtggatgca
gccaactcgtttgaagaggttgccgatacttatcatcagcttggaaacgcccagtctcag
ctgagacagtacgaaaagactttgatctatcatagagagtcggttcgaatcaataggaag
attgaagagaaagatgccctgtacaaagtgtcgttagatatggcaaaatgttgcgagaag
atgaacaactttgaactcgctattgagtgttacaacgactgtctacgggggacggaggaa
ttgaacgataacaacaatattgctattgttttgcgacgaatgggagagatccaaatgaac
aagctacacaactacgcagatgctataaagctctttcttgatgcattggagctattacga
agcgaaggagatgacggcagcggcgacgaagaacagagtatacttggtttgctgccaata
attggagaggcctacgctcttgcgaaagactacgagaatgctcttgactttttcgaggag
cacatcaagggtgttgaaagtgctactcctgttaacgaagctttggttgccgaatcttta
tacgcgatgggtgtcatctttgcaaacatggatgagaatagtgattatgaacttgcaata
gagaagctggaagagtgctggaatatcaaaaaggaactgtttggtccagacgatgaacgt
gttgcagatgtggtctacactattgctaccgtctacgaaaaggaagagaacatcgataaa
gctgtggagttgctgagcattgcacttcggacgtacaagatgaagaggaacaagcacgat
acttccaagacataccacgccttggcgaagttgaaagcgtcgtcgtcggcaaagtcggga
gttgaattagaccacatcgctgcattagagtgctacgaggaagcaatcaaggaacgacgc
aaagtcgccgtgctagatgatatcgtgcttgcgtcaatgttgtacgaatatgcaacaata
ctgtgtgccagatcagactacgacactgcaatgcctctactggaagaggctttgcgcatt
cagaaggtgaaaaagggactgaaggatgatcaagttgcaaatatcttgttgcggactgcc
gaggtacacattcacaacggaaaatatgatgcatcactggtttctctcgagcaagttctc
tttattcacaatgctcttggtgaagccgttgacattgatctaggtttatgccatcactta
ctcagctcgacatatctcgcaagaggcaattacgagaaggcagttgagtcgtctttggaa
tcattaaagtggaaacgagatgagtttggccataatagccttgaatgcgcctctgtgcac
aacaaccttggaaaggcgtacggcaagttgaacgagtttgacaaggcgattgaatcgctt
gtcgaagctcttcgtattcgaaagattgaattgggaaatgactcacttgagtatggcgac
acagtcttaagtcttgccgaacttcatgttgcaatgggcaagcattcgcaagcactgaac
tgtttagttgaggcgatacgagtattcgagatgttcccagaagttgatatcaatcaagtt
gttgaggcaatggaaatgaaaggagacgctcattcttcgctaaaagactactatgatgca
gcagcgtcgtaccgagaatgcattgacatctatgaagattcttctgacgtgtcagcatca
gaggaatatgtcgcaactcttaatcacaagctcggaaaggctcttgccagcatacatgaa
tacgatgaagcatttgctgcttatcgagtatccatcaagaagtttagcagtgcgctagga
acagataacttacgcgttgcggatgtgatgcatgatgtcggcttattgactctcggagat
ggtgctattgagaaggcagttcagtgttttaacgagacgacgcgtatttacacgctgcac
ggcgaacagaacagcacaaaggtggcagatactctggttcaacttggaaccattcacacc
gatcagtccgaaaatgatgaggcaatgcaagtatttgaaaaagccatcaagctatacaaa
gaaaagcttgggggcgacgcagttgagattggacgagctttgctattggtcggaagactg
catgatatcagaggagaatacgacaagtctatgtctagtttcaccgaggcacttcgtaca
ttcaaatcttctctaagtgaagatgatatgagtatatctcttgcgttatcaaacatcggg
attgtccactcacgaaggaaagagtactcagacgcagtggagatgtgcatcgaagcactg
cgaatccgaaagatacacacggagaacgatgaggacgtcgcagactccctcttcaacatc
gggaacatatatgacgaatggggaaagcaagacgatgcactgccgtactttgagggtgct
ttgaagctttaccgacttctgttgggagacgaagacattactgtggcgaactgtcagcaa
cggttgggagctatttactgggttcaaaagaaggtggagaaatccctggactccttctgc
attgcactctctatttgcgagaaagtagtcgatgacgttgagcatcttcttctgcccatc
tacaaaggccttggcggctgctatttcagtcaagaagagtatgacaaggcacttgacaac
tttgcattttgcctcaagatacaaaagacggaacttggcgacgatagcattgaaatggct
actacatgcaacatcattggcttgatatatcaaaagaaagaaaagcctttagagagcatc
aatttccacatcaaagctttgcagatatatgagaagcatcgcgacaaagggtccaaggat
tgcatattctctcacattcagttatccaaagctctcttggcttcagggcagtgcgacaat
tctatttctcggctgcgagaatgccttgcggtgtactcgaaggatggagacgagaataga
gaagagattgctgccgtgtaccatcagttaggaattgcacaaaacaagcttgttgagtac
gaagaagcaatagactcgctgaacaaagcccttgatattcggattagagtgttcggcaag
gctgacgcaaaagtagctgtcacgctgcttgatctcgggaaagtgcttcaggagtggggt
gatttggatgaggcgatcggagtatacgaccaagccataacaatcttccagaagactgat
tgcgacaaatacactgttgccgatacctattcgcaagtagcagaacttttcatcgaacaa
gaaaagcatgactcgtcgcttgactctctcaaaaaggctctgaagttgtacagcagccac
tgtggaagtgactcctatgaagttgcgaaaacgctcctccagattggtaaggaatatgtt
caactagataacatggagaaatccacaggatgcttctccgaggcagtgaagatactcaga
tcttgcgatggggacaacgatatcttgatcagtcaagcattgagcagtctcgggcagaac
tatgcacgtaagaagatgtacgccaaggccatcgagatgtccacggaggcattgagaatc
cagaagcaacacggagacgagtttgtgagtattgcagacacactctcaacaattgggaac
attttggatgaatggggaaaggtagaacaggcgttgcagttctacgaagaggcactgaga
ttgtacgaaaatgctgtagggttggattctgttgaagttgccaactgccagtacaatgtt
gcccttattgaaaagaaactcggcgaatcagaggctgcgctcttgaactttggtcaagct
cttcgtacccaccggacgaaagaaggagacaagagccttggtgtttcaaacgatttgtat
cagattggcgagatctatgactcgtttggtgacaaagaaaaggcattgcaatgcttccag
gagtgcctcaaaatcaggaaggaaaattttagcgatgaccatttggacgttcttgcggca
cgccgttacgttgatactctgcgcaggaggctacgatactaa
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integrated database retrieval system