Thalassiosira pseudonana: THAPSDRAFT_22265
Help
Entry
THAPSDRAFT_22265 CDS
T01078
Name
(RefSeq) predicted protein
KO
K20292
conserved oligomeric Golgi complex subunit 5
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_22265
Membrane trafficking [BR:
tps04131
]
Endosome - Golgi transport
Tethering complex
Conserved oligomeric Golgi (COG) complex
THAPSDRAFT_22265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COG5_C
Med25_VWA
Motif
Other DBs
NCBI-GeneID:
7447956
NCBI-ProteinID:
XP_002289323
JGI:
22265
UniProt:
B8BZC7
LinkDB
All DBs
Position
4:1086698..1090196
Genome browser
AA seq
1086 aa
AA seq
DB search
MNDTPPSNDGTATNTIGLGAANALALLLREDPMLLQHGLTSYQGISSPFDGQHIDNDGGD
DAAYSYAASLLCANGGEFVDSSGWMSSSGERATEALAEVDRKLALVESLAQRVSRDAPEK
VAGPLLRLHGFDLVATHNNANARQADVKASNTTTITATRDKVERLRRQSEVLDTVARRVE
STLQRGVSRMESATTRLSRVLELSSTLKMMLRLQFEARKVHESGLDLESMNLDLRDLTRA
AASVAAMEELLAHPSLTPKDGGGMGVHGTIDVVEKLRPEADAVATSVRQAAAGLMNELQS
HPLTSGSASSLSRLGATLQVYFHLGELSDATWKAVASALTSAEKANAQLFHPTAIQQMNE
AAKSEARALAEAEALKIAKEEESSANSGSSSKLDPRQRKKQTEATYERLYHRKLRDKRAA
AASKWATGVSDAASRVWNLHRVLARRNDPVSRKNFLEVVAESEVPKEFGGAEERLLCIGL
GGRVQRLLRYDNSNLEGDVAALYPAICAASLEMVTELYDVMQMGSSSSDDAAAGLSSTGT
GWSSVGVMGGSAGLENSVFLGMDGKGDDDVLSKADEAAGGFLGGASADVWTHVETSSAGD
VSNQSSGLARSGGASSATSSSTLAVFSSAEWIALQGGKRTGDTTMGLMPLQCAFLSESKK
RLFAPLKFMFPEAVAVDEDGVALPVLPTLPSRYDLAKLDANIREELSLADPRQGGGDLSM
TTMISETVVSMLHEFCSSAKRAISDAGEDRIVDPRTGSATESIKHNLKVAVVMSTLAAFV
RNAPENTFVVPYRPAQSSQHEEASHSCSHALLPALQEIDTLVKSSILNPLARALNRLVST
AIAKMHRGTYLQDSGDNAQSSSFVQVHLHDLYEKFATTYLSPLPNEYASVVASTIASFSI
YAFVSNAALVRPLEETSRLRLTQDLSEFELALEQLVFKGGTSISLSQVADGKPYAELRAF
RQLLFWNMLDDKTASPAEVSKSLLREVWVKDLRPSTLFHFLFSFAPALLSSPHHFKRMEA
GEYVGSLVKLDGSVDDGEASAWLAVMACCDAYQQRESVDGHIADGDRRISAILMLVGPEL
LRRRRQ
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacacccccctcaaacgacggcaccgccaccaacaccatcggccttggtgcc
gccaacgctctcgcccttctcctacgcgaagatcctatgttgcttcagcatggcctaacg
tcgtatcagggcatatcatctccgtttgatgggcagcacatcgacaacgacggtggcgac
gatgctgcctattcctacgctgcctcgctcctctgcgccaatggaggtgaatttgtagat
tcgtctggatggatgtcttcatcgggggaacgcgctactgaggcgttagcagaagttgac
cgtaaattagcacttgtagaaagcttggcacaacgtgtatcaagagatgcacccgagaag
gtcgccggtcccttgcttcgtttgcacggattcgatctagtggcaacacacaacaatgct
aatgcacgacaagctgatgtaaaggcatccaacacaacaacaatcacagccacccgagac
aaggtagaaagattgcgtcgtcaatccgaagttctcgacacagtcgcccgtcgtgtagag
tccacattgcaacgtggggtatcgcgtatggaatcagcaaccactcgtctctcacgagta
ttggaactaagttccacgctcaaaatgatgttgcgattgcagtttgaagcacgtaaagtt
catgagagtggattggatttggagtcgatgaatctggatttgagggatttgacgagggct
gctgcgagtgttgcggcgatggaagagttgttggctcatccttcgcttacacccaaagac
ggaggggggatgggtgttcatggtactattgatgttgtggagaagttgcgtccggaagct
gatgctgtggcaacgtctgtgaggcaggcagctgctgggttgatgaatgagttgcaaagt
cacccattgacatctggatctgcatcgtctctctcacgattaggtgctactctacaagtt
tactttcaccttggcgaattgtccgatgcaacatggaaggcagttgcatccgctttaacc
tctgccgagaaggcaaacgctcaactctttcaccctacggcaatacaacagatgaacgaa
gcagctaagtcagaagcaagggcgcttgcagaggcggaggcactgaaaattgccaaagag
gaagaatcatctgctaattctggatcatcatcaaaacttgacccgcgccagcgtaagaaa
caaacggaagcgacctatgaacggctttaccatcgtaaactacgcgataaacgagcggct
gctgcatctaaatgggcgacaggtgtatcagatgctgcgtcgcgtgtgtggaacttgcac
cgtgtactagctcgtaggaatgatcccgtttcacgaaagaacttcttggaggttgtggcc
gagagtgaagtgccaaaggagtttggaggagcagaagagaggttgctgtgcattggtctc
ggtggaagagttcagcggctgttgagatacgacaatagtaatttggagggtgatgttgct
gctctatacccggcaatttgtgcggcatctttagagatggttacggagttgtatgatgta
atgcaaatgggaagctcgtcttctgatgacgctgctgccggactttcgtccacggggact
ggttggagctctgttggagtgatgggaggatccgctggcttggagaactcggtctttctt
ggcatggatgggaagggagacgatgacgttttgagcaaagcagacgaagccgcgggaggg
ttcctcgggggagcaagtgctgatgtttggacgcatgtcgaaactagttccgctggagat
gtatcaaatcaaagcagtggccttgcacgttctggaggagcttcatcggcaacttcatcc
tcaactttggctgtgttctcgtcggcggaatggattgctctgcagggtggaaaacgcact
ggagataccacgatgggtctcatgcctcttcagtgtgctttcttgtctgagtccaagaag
agactctttgctccattgaaattcatgtttcccgaagcagtggcggttgatgaagatggg
gtggcactcccggtccttccaacactgccttctcgttacgacttggctaagcttgatgcc
aatattcgcgaagagctttccctcgccgatccacgtcagggcgggggagatttgagtatg
acgaccatgattagtgaaacggttgtcagcatgctacacgaattctgcagttcggcgaaa
cgtgccatcagtgatgctggtgaagacaggattgttgatcctcgtacaggttctgcaacg
gaatccatcaagcacaatctcaaggtggctgtggtaatgagcaccctcgccgcgtttgtg
aggaatgctcctgaaaatacatttgttgtaccctatcgtccagctcaatcgtctcagcac
gaagaagcgtcacactcatgctcgcatgcccttctcccagcattgcaagagattgatact
cttgtcaaatcgtctattctcaaccctctcgcccgtgcgttaaatcgtctagtctccacc
gccatagcgaagatgcatcgcggcacataccttcaagattctggagacaatgcccaatcc
agctcatttgttcaggttcatcttcacgatttatacgaaaaatttgcgacgacatacctt
tcgcctcttccaaacgaatatgcgagcgttgtggcgtcgacaatcgcttcgttttcaatc
tatgcgttcgtatcaaatgcagcattagttagaccattagaggaaacgagcaggcttcgt
cttactcaggatctgagcgaattcgaacttgcattggaacaactagtcttcaagggaggc
acatctatttctctcagccaagttgcagatggaaagccttacgcagagttgcgggcattc
agacagctattgttttggaatatgcttgatgacaagactgcttctcctgctgaggtttct
aagagcttactgcgtgaagtctgggtgaaggatcttcgtccgtctactctattccacttt
cttttttcttttgctccagctctcttgtcttcgcctcaccatttcaagcgaatggaggcc
ggggaatacgtggggtcgctagtgaagcttgatggatcggttgacgacggcgaagcaagt
gcatggcttgccgtgatggcatgctgtgatgcatatcaacaaagggaaagtgtagacggg
catattgcggatggtgatcgtcgcatcagtgcaattctgatgttggtaggtccggaatta
ctcaggagacgacgccaatga
DBGET
integrated database retrieval system
