Thalassiosira pseudonana: THAPSDRAFT_22319
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Entry
THAPSDRAFT_22319 CDS
T01078
Name
(RefSeq) predicted protein
KO
K14018
phospholipase A-2-activating protein
Organism
tps
Thalassiosira pseudonana
Pathway
tps04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
THAPSDRAFT_22319
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUL
PFU
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_SCAP
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
WDR90_beta-prop_4th
Beta-prop_LRRK2
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_BBS7
Beta-prop_EML
Beta-prop_DCAF12
Beta-prop_IP5PC_F
Beta-prop_Vps41
NBCH_WD40
Motif
Other DBs
NCBI-GeneID:
7448820
NCBI-ProteinID:
XP_002289848
JGI:
22319
UniProt:
B8BZP4
LinkDB
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Position
4:complement(1391082..1393682)
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AA seq
845 aa
AA seq
DB search
MDLSSEYTLSTQLLSDGEPVRCVTIHNNTAPASLELLSGSQGGIVSRFTLPDQDAVKKPS
ADGAGAVLDIQPGGANTRHPHQITAILSSASVVPSPAKLVPSIYITGCKDGNIRVMDGNT
HELKFVLEGHSNAVTSLSWIPSFDASGDPWLVSGSWDGTAKIWDVVSQFQKNTDSGSGCC
VETIAGHENTVSVAGLPAESSTSRKVVTVSAGVAEGNVIRGHTVRIWRLTPPSSSGSDVK
SDLLSSVANDHSGPMRDVCYDAETNAIYTCSNDGTVKIRSAEDGKCKTTLAYPGDTPMLL
SVCVVGDWQTKVVVAGAEDGNVVVWDISNSNNGQNREAQVIGHTGCVWKVSPLGNGDFVT
ACNDGHIRTFTRNPELTASPDILRAFQEAVTAAHSARSSGPSAEEISKLPKWEMNALTQG
RSEGQVQVFQKDGKAIAAQWSSSSRTWIEVGEVTGTNANAGTLNGKSYDHVLPIEIDVPG
GGVQKLQIGYNNGENPFVTAQQFIDEHMLDQNYLPQIADYIRQRAGESGPTLGGGNAAAP
TIYEPEPNGPTPMETEPTLAYAHLPMKGYKTFDAGIDKKGLTKVVQKIREFNSSVTSNQL
SPNESEDLLDSLSITLATTNRYHSSTVSAAELAIIHKMITHWDAAHSFPALDLARMVVLH
PDASKGERKGYWSDVLGGALALCTGLGGNIVKEVAVPMLTMRLVANSYKGGSGSLGAAEG
LVDTILDCAEACAPSDNKNVRLAVATVVLNVSSNMYTSSLASSSTAIRVLDVVGTIVGCG
KYEPEAIVRSLVALGTILLLPGECGSEVKRIAKERGIGSMLERVATGHGEIGDAVATEIQ
LVLAQ
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggatttatcatcagagtacaccctatcaacccagctcctctccgacggcgagccagta
cgatgcgtcaccatccacaataatacagcaccggcctctcttgaattactctcgggatct
cagggtggcatcgtctcaagattcaccctccccgatcaagatgctgtcaaaaagccatct
gccgatggagccggtgccgtgcttgacattcagccgggaggagcaaacacccgccatcct
catcaaataactgccattttgtcatctgcttcggtggtgccttctcccgcgaagttggtg
cctagcatctacattacgggatgcaaggacgggaacatccgtgtgatggatggaaatact
cacgagttgaagtttgttctggagggacattctaatgcagttacgagtctatcttggatt
ccttcgtttgatgcctcaggggatccttggcttgtcagtggcagttgggatggcactgcc
aagatttgggatgtcgtctctcagtttcaaaagaacacagacagcggtagtgggtgttgt
gtcgagactatcgctggacatgaaaacacagtctccgtcgctggattgccggctgaatct
tccacttctcgcaaagtcgtcacggtcagtgctggagtggcagaggggaatgttatccgc
ggccacaccgttaggatttggcgtttgacgcctccctcgtccagcggtagcgatgtgaaa
tcagatctactttcttctgttgccaatgatcactctggtcccatgcgtgatgtgtgttac
gatgcagaaacaaacgcaatctacacttgcagcaacgatgggacggtcaagatcagatct
gccgaagatggaaagtgcaagacaacgctggcatatcctggggatactcccatgctgcta
tctgtgtgtgttgtgggggattggcaaacaaaagttgtcgtggccggagctgaggatggg
aatgttgtggtgtgggatatatccaactcaaacaatggtcagaaccgtgaggctcaagtg
attggtcacacaggatgtgtgtggaaagtatcacccttgggaaacggtgacttcgttacc
gcttgcaatgacggacacattcgtaccttcactcggaatccagaactcactgcatcacca
gacattctccgtgccttccaagaggcagtcactgccgcacactctgcaagatcctctggt
ccatctgctgaagaaatatccaagcttcccaagtgggaaatgaacgccttgacacagggt
cgctcagagggacaagtacaggtgtttcaaaaggacggaaaggcaattgcagcacagtgg
tcgagctcctcgcgtacttggattgaagttggagaggtgactgggacgaatgcaaatgca
ggaacactcaatggcaagagttacgatcacgtcttgccgattgaaatagacgttcctgga
ggcggagtgcagaaacttcagattggatacaataacggggagaacccatttgtgacagcc
cagcaattcattgacgagcacatgttggatcagaattatttgcctcagattgcagattac
attcgacaaagagctggtgagagtggaccgactcttggaggaggaaatgccgctgctcct
actatttatgaaccagagccaaatgggcccacgccgatggagacggagccaactcttgct
tacgcccacttgccgatgaaaggatacaaaacatttgatgccggaattgacaagaagggg
ctgacgaaagtggttcaaaagattcgtgaattcaacagttcagtgacgtctaatcagctc
tccccgaacgaatcggaagacttgctggattctctctccatcacactcgctacaaccaat
cgttatcactcctccacggtctccgcggctgaacttgcaatcattcacaagatgattact
cattgggatgcagcgcattcattccccgcattagacttggcgaggatggtcgtacttcac
ccggatgcatcaaagggagaacgaaaagggtattggtcggacgttttgggtggggctctt
gcgctgtgcacaggtttaggtggcaacattgtaaaggaggtggcagttccaatgcttaca
atgaggttggtagcaaacagttacaagggaggatctggttcacttggagcagcagaagga
ctggtcgacaccattttggattgtgctgaagcatgtgctccctctgacaacaaaaatgtt
cggctggctgtagccacagttgttctcaacgttagctccaacatgtacacttcgtctttg
gcgtcgtcctcaacagcaatccgtgtattagatgtcgtcggaaccatcgtagggtgtgga
aagtatgagcctgaagctattgttcgctctctagtcgcactaggtacgatacttctcctc
cccggagaatgtggatcggaagtaaaacggatagcaaaagagaggggaatcggatcaatg
ttggaacgagttgcaaccggacatggtgagatcggagatgctgtggcaacggagatccag
ttggtgctggcacagtga
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