KEGG   Thalassiosira pseudonana: THAPSDRAFT_22319
Entry
THAPSDRAFT_22319  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K14018  phospholipase A-2-activating protein
Organism
tps  Thalassiosira pseudonana
Pathway
tps04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    THAPSDRAFT_22319
SSDB
Motif
Pfam: PUL PFU WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_SCAP EIF3I Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 WDR90_beta-prop_4th Beta-prop_LRRK2 Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_BBS7 Beta-prop_EML Beta-prop_DCAF12 Beta-prop_IP5PC_F Beta-prop_Vps41 NBCH_WD40
Other DBs
NCBI-GeneID: 7448820
NCBI-ProteinID: XP_002289848
JGI: 22319
UniProt: B8BZP4
LinkDB
Position
4:complement(1391082..1393682)
AA seq 845 aa
MDLSSEYTLSTQLLSDGEPVRCVTIHNNTAPASLELLSGSQGGIVSRFTLPDQDAVKKPS
ADGAGAVLDIQPGGANTRHPHQITAILSSASVVPSPAKLVPSIYITGCKDGNIRVMDGNT
HELKFVLEGHSNAVTSLSWIPSFDASGDPWLVSGSWDGTAKIWDVVSQFQKNTDSGSGCC
VETIAGHENTVSVAGLPAESSTSRKVVTVSAGVAEGNVIRGHTVRIWRLTPPSSSGSDVK
SDLLSSVANDHSGPMRDVCYDAETNAIYTCSNDGTVKIRSAEDGKCKTTLAYPGDTPMLL
SVCVVGDWQTKVVVAGAEDGNVVVWDISNSNNGQNREAQVIGHTGCVWKVSPLGNGDFVT
ACNDGHIRTFTRNPELTASPDILRAFQEAVTAAHSARSSGPSAEEISKLPKWEMNALTQG
RSEGQVQVFQKDGKAIAAQWSSSSRTWIEVGEVTGTNANAGTLNGKSYDHVLPIEIDVPG
GGVQKLQIGYNNGENPFVTAQQFIDEHMLDQNYLPQIADYIRQRAGESGPTLGGGNAAAP
TIYEPEPNGPTPMETEPTLAYAHLPMKGYKTFDAGIDKKGLTKVVQKIREFNSSVTSNQL
SPNESEDLLDSLSITLATTNRYHSSTVSAAELAIIHKMITHWDAAHSFPALDLARMVVLH
PDASKGERKGYWSDVLGGALALCTGLGGNIVKEVAVPMLTMRLVANSYKGGSGSLGAAEG
LVDTILDCAEACAPSDNKNVRLAVATVVLNVSSNMYTSSLASSSTAIRVLDVVGTIVGCG
KYEPEAIVRSLVALGTILLLPGECGSEVKRIAKERGIGSMLERVATGHGEIGDAVATEIQ
LVLAQ
NT seq 2538 nt   +upstreamnt  +downstreamnt
atggatttatcatcagagtacaccctatcaacccagctcctctccgacggcgagccagta
cgatgcgtcaccatccacaataatacagcaccggcctctcttgaattactctcgggatct
cagggtggcatcgtctcaagattcaccctccccgatcaagatgctgtcaaaaagccatct
gccgatggagccggtgccgtgcttgacattcagccgggaggagcaaacacccgccatcct
catcaaataactgccattttgtcatctgcttcggtggtgccttctcccgcgaagttggtg
cctagcatctacattacgggatgcaaggacgggaacatccgtgtgatggatggaaatact
cacgagttgaagtttgttctggagggacattctaatgcagttacgagtctatcttggatt
ccttcgtttgatgcctcaggggatccttggcttgtcagtggcagttgggatggcactgcc
aagatttgggatgtcgtctctcagtttcaaaagaacacagacagcggtagtgggtgttgt
gtcgagactatcgctggacatgaaaacacagtctccgtcgctggattgccggctgaatct
tccacttctcgcaaagtcgtcacggtcagtgctggagtggcagaggggaatgttatccgc
ggccacaccgttaggatttggcgtttgacgcctccctcgtccagcggtagcgatgtgaaa
tcagatctactttcttctgttgccaatgatcactctggtcccatgcgtgatgtgtgttac
gatgcagaaacaaacgcaatctacacttgcagcaacgatgggacggtcaagatcagatct
gccgaagatggaaagtgcaagacaacgctggcatatcctggggatactcccatgctgcta
tctgtgtgtgttgtgggggattggcaaacaaaagttgtcgtggccggagctgaggatggg
aatgttgtggtgtgggatatatccaactcaaacaatggtcagaaccgtgaggctcaagtg
attggtcacacaggatgtgtgtggaaagtatcacccttgggaaacggtgacttcgttacc
gcttgcaatgacggacacattcgtaccttcactcggaatccagaactcactgcatcacca
gacattctccgtgccttccaagaggcagtcactgccgcacactctgcaagatcctctggt
ccatctgctgaagaaatatccaagcttcccaagtgggaaatgaacgccttgacacagggt
cgctcagagggacaagtacaggtgtttcaaaaggacggaaaggcaattgcagcacagtgg
tcgagctcctcgcgtacttggattgaagttggagaggtgactgggacgaatgcaaatgca
ggaacactcaatggcaagagttacgatcacgtcttgccgattgaaatagacgttcctgga
ggcggagtgcagaaacttcagattggatacaataacggggagaacccatttgtgacagcc
cagcaattcattgacgagcacatgttggatcagaattatttgcctcagattgcagattac
attcgacaaagagctggtgagagtggaccgactcttggaggaggaaatgccgctgctcct
actatttatgaaccagagccaaatgggcccacgccgatggagacggagccaactcttgct
tacgcccacttgccgatgaaaggatacaaaacatttgatgccggaattgacaagaagggg
ctgacgaaagtggttcaaaagattcgtgaattcaacagttcagtgacgtctaatcagctc
tccccgaacgaatcggaagacttgctggattctctctccatcacactcgctacaaccaat
cgttatcactcctccacggtctccgcggctgaacttgcaatcattcacaagatgattact
cattgggatgcagcgcattcattccccgcattagacttggcgaggatggtcgtacttcac
ccggatgcatcaaagggagaacgaaaagggtattggtcggacgttttgggtggggctctt
gcgctgtgcacaggtttaggtggcaacattgtaaaggaggtggcagttccaatgcttaca
atgaggttggtagcaaacagttacaagggaggatctggttcacttggagcagcagaagga
ctggtcgacaccattttggattgtgctgaagcatgtgctccctctgacaacaaaaatgtt
cggctggctgtagccacagttgttctcaacgttagctccaacatgtacacttcgtctttg
gcgtcgtcctcaacagcaatccgtgtattagatgtcgtcggaaccatcgtagggtgtgga
aagtatgagcctgaagctattgttcgctctctagtcgcactaggtacgatacttctcctc
cccggagaatgtggatcggaagtaaaacggatagcaaaagagaggggaatcggatcaatg
ttggaacgagttgcaaccggacatggtgagatcggagatgctgtggcaacggagatccag
ttggtgctggcacagtga

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