KEGG   Thalassiosira pseudonana: THAPSDRAFT_22464
Entry
THAPSDRAFT_22464  CDS       T01078                                 
Symbol
FUM1
Name
(RefSeq) fumarate hydratase
  KO
K01676  fumarate hydratase, class I [EC:4.2.1.2]
Organism
tps  Thalassiosira pseudonana
Pathway
tps00020  Citrate cycle (TCA cycle)
tps00620  Pyruvate metabolism
tps01100  Metabolic pathways
tps01110  Biosynthesis of secondary metabolites
tps01200  Carbon metabolism
Brite
KEGG Orthology (KO) [BR:tps00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00020 Citrate cycle (TCA cycle)
    THAPSDRAFT_22464 (FUM1)
   00620 Pyruvate metabolism
    THAPSDRAFT_22464 (FUM1)
Enzymes [BR:tps01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.1  Hydro-lyases
    4.2.1.2  fumarate hydratase
     THAPSDRAFT_22464 (FUM1)
SSDB
Motif
Pfam: Fumerase_C Fumerase HeH DUF3335
Other DBs
NCBI-GeneID: 7451374
NCBI-ProteinID: XP_002289528
JGI: 22464
UniProt: B8C0H3
LinkDB
Position
4:2088957..2090837
AA seq 626 aa
MAAYLKRAAMIRSVRSHASSLLPSLASSTLPSASTPLIGNFISLNACNTLLDRWLSSSAG
NVEVTKTSRSSSKKIKPSPPAFNYTPLFDSAPDTTTSYRQILPSSAVETVSLPDGTSLLR
VSEEALRTLSSTAFEDIAHLLRPAHLAQLRKILDDPEASDNDRFVAMELLKNANIASGRI
LPGCQDTGTAIVMGKRGHLVLTDGNDEEHLSGGAYDAYTRSNLRYSQVAPVSMFEEKNTG
TNLPAQVDIFGAKGDEYNFLFIAKGGGSANKTFLYQQTKALLNTGSLDAFLKEKIKTIGT
SACPPYHLAVVIGGLSAEQNLKTVKLASTKYYDTLPTEGDPNGSGRAFRDVEWEEHILEM
TRNLGIGAQFGGKYFCHDVRVVRLPRHGASCPVGIGVSCSADRQVKGKITKDGVFIEELE
TDVSKYLPDVTEKDLAGATAEDVVKIDLNSMTMAELRETLSQHPVRTRLSLTGTIVVARD
IAHAKMLHKIESGEGLPEYAKNNIIYYAGPAKTPEGYASGSFGPTTAGRMDAYVDKFMEH
GGSFVTLAKGNRSRQVTNACKKYGGFYLGSIGGPAAILAKNCIKNVEVLDNEEDGMEAVW
KIDVEDFPAFIVVDDKGDDFFKEWLG
NT seq 1881 nt   +upstreamnt  +downstreamnt
atggcagcctacctcaagcgagcggccatgatccgctctgttcgtagccatgcatcctcc
ttacttccgtccttagcgtcatctaccctgccatctgcttcgacgcctctcatcggcaat
ttcattagccttaacgcatgtaacacacttctcgatcgatggctttcctcatccgctggc
aacgttgaggttacaaagacatcacgctcttcttccaaaaagatcaagccttcaccgcca
gccttcaactacacacctctcttcgattcagccccagacactacaacatcctatcgtcaa
atcctcccatcgtcggcagtagagaccgtctctctccccgatggaacctcacttctcaga
gtatcggaagaagcgctacgaactttatcctccactgcctttgaggacattgcacacctc
ctacgtccggcacatttagctcaactgcgaaagatactggacgatccagaggcatctgac
aacgatcgttttgtggcaatggagttactgaagaatgcaaacattgcttcgggtaggata
ttgcccggatgtcaagacacgggaacggcaatcgtcatgggcaaacgggggcatttggta
ttgacggatggaaacgacgaagagcacctctccggtggagcatatgatgcctacacgaga
tcaaatctacgatatagtcaagtagctcccgtgtccatgttcgaagagaagaacacggga
acaaacttgccagcacaggtggatatttttggtgctaaaggagatgagtacaactttctg
ttcattgccaagggtggaggttccgcgaacaagacatttttgtatcagcagacaaaggca
ttactcaacactggtagtttggatgcgtttttgaaggagaagatcaagacgattggtact
tcggcttgtcctccatatcatttagctgtcgttattggaggattgagtgcagagcagaac
ctcaaaacagttaagcttgcatccacaaagtactatgatacgcttccaactgaaggagat
ccgaatggaagtgggcgtgcctttcgcgacgttgagtgggaagagcacattttagaaatg
actcgtaatctgggaattggagctcagtttggaggcaagtacttctgtcacgatgtacgt
gtcgtacgacttcctcgccatggtgccagttgccctgtcgggattggcgtatcatgcagt
gcggataggcaagtgaaggggaagattacaaaggatggtgtattcattgaagagttggag
acggatgtgagcaagtatttgccagacgttacggagaaggatctggctggagctactgcc
gaagatgttgtcaagattgatttgaactcaatgaccatggcagagttgagagagactctt
tcgcagcatcctgttcggacacgtcttagtctcactggaacgattgtggtggcacgtgat
attgcccatgcaaagatgcttcacaagattgagagtggagaaggattgccagagtatgcc
aagaacaatatcatctactacgcaggtcctgcgaagactccggagggatacgcttcaggt
tcattcggtccaacaacggcaggaaggatggatgcctacgtggataagttcatggagcat
ggtggatcattcgtcactcttgccaaaggcaatcgttctcgacaagtgacaaatgcatgt
aagaagtacggcggtttctatcttggaagcattggtggacctgccgctatcttggcaaag
aattgtatcaagaatgtagaagtgttggataatgaggaggatggaatggaggctgtttgg
aagatcgacgtggaggattttcctgcctttattgttgttgatgacaagggagacgacttc
ttcaaagagtggcttggatga

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