Thalassiosira pseudonana: THAPSDRAFT_22464
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Entry
THAPSDRAFT_22464 CDS
T01078
Symbol
FUM1
Name
(RefSeq) fumarate hydratase
KO
K01676
fumarate hydratase, class I [EC:
4.2.1.2
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00020
Citrate cycle (TCA cycle)
tps00620
Pyruvate metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
THAPSDRAFT_22464 (FUM1)
00620 Pyruvate metabolism
THAPSDRAFT_22464 (FUM1)
Enzymes [BR:
tps01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.2 fumarate hydratase
THAPSDRAFT_22464 (FUM1)
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GFIT
Motif
Pfam:
Fumerase_C
Fumerase
HeH
DUF3335
Motif
Other DBs
NCBI-GeneID:
7451374
NCBI-ProteinID:
XP_002289528
JGI:
22464
UniProt:
B8C0H3
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Position
4:2088957..2090837
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AA seq
626 aa
AA seq
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MAAYLKRAAMIRSVRSHASSLLPSLASSTLPSASTPLIGNFISLNACNTLLDRWLSSSAG
NVEVTKTSRSSSKKIKPSPPAFNYTPLFDSAPDTTTSYRQILPSSAVETVSLPDGTSLLR
VSEEALRTLSSTAFEDIAHLLRPAHLAQLRKILDDPEASDNDRFVAMELLKNANIASGRI
LPGCQDTGTAIVMGKRGHLVLTDGNDEEHLSGGAYDAYTRSNLRYSQVAPVSMFEEKNTG
TNLPAQVDIFGAKGDEYNFLFIAKGGGSANKTFLYQQTKALLNTGSLDAFLKEKIKTIGT
SACPPYHLAVVIGGLSAEQNLKTVKLASTKYYDTLPTEGDPNGSGRAFRDVEWEEHILEM
TRNLGIGAQFGGKYFCHDVRVVRLPRHGASCPVGIGVSCSADRQVKGKITKDGVFIEELE
TDVSKYLPDVTEKDLAGATAEDVVKIDLNSMTMAELRETLSQHPVRTRLSLTGTIVVARD
IAHAKMLHKIESGEGLPEYAKNNIIYYAGPAKTPEGYASGSFGPTTAGRMDAYVDKFMEH
GGSFVTLAKGNRSRQVTNACKKYGGFYLGSIGGPAAILAKNCIKNVEVLDNEEDGMEAVW
KIDVEDFPAFIVVDDKGDDFFKEWLG
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atggcagcctacctcaagcgagcggccatgatccgctctgttcgtagccatgcatcctcc
ttacttccgtccttagcgtcatctaccctgccatctgcttcgacgcctctcatcggcaat
ttcattagccttaacgcatgtaacacacttctcgatcgatggctttcctcatccgctggc
aacgttgaggttacaaagacatcacgctcttcttccaaaaagatcaagccttcaccgcca
gccttcaactacacacctctcttcgattcagccccagacactacaacatcctatcgtcaa
atcctcccatcgtcggcagtagagaccgtctctctccccgatggaacctcacttctcaga
gtatcggaagaagcgctacgaactttatcctccactgcctttgaggacattgcacacctc
ctacgtccggcacatttagctcaactgcgaaagatactggacgatccagaggcatctgac
aacgatcgttttgtggcaatggagttactgaagaatgcaaacattgcttcgggtaggata
ttgcccggatgtcaagacacgggaacggcaatcgtcatgggcaaacgggggcatttggta
ttgacggatggaaacgacgaagagcacctctccggtggagcatatgatgcctacacgaga
tcaaatctacgatatagtcaagtagctcccgtgtccatgttcgaagagaagaacacggga
acaaacttgccagcacaggtggatatttttggtgctaaaggagatgagtacaactttctg
ttcattgccaagggtggaggttccgcgaacaagacatttttgtatcagcagacaaaggca
ttactcaacactggtagtttggatgcgtttttgaaggagaagatcaagacgattggtact
tcggcttgtcctccatatcatttagctgtcgttattggaggattgagtgcagagcagaac
ctcaaaacagttaagcttgcatccacaaagtactatgatacgcttccaactgaaggagat
ccgaatggaagtgggcgtgcctttcgcgacgttgagtgggaagagcacattttagaaatg
actcgtaatctgggaattggagctcagtttggaggcaagtacttctgtcacgatgtacgt
gtcgtacgacttcctcgccatggtgccagttgccctgtcgggattggcgtatcatgcagt
gcggataggcaagtgaaggggaagattacaaaggatggtgtattcattgaagagttggag
acggatgtgagcaagtatttgccagacgttacggagaaggatctggctggagctactgcc
gaagatgttgtcaagattgatttgaactcaatgaccatggcagagttgagagagactctt
tcgcagcatcctgttcggacacgtcttagtctcactggaacgattgtggtggcacgtgat
attgcccatgcaaagatgcttcacaagattgagagtggagaaggattgccagagtatgcc
aagaacaatatcatctactacgcaggtcctgcgaagactccggagggatacgcttcaggt
tcattcggtccaacaacggcaggaaggatggatgcctacgtggataagttcatggagcat
ggtggatcattcgtcactcttgccaaaggcaatcgttctcgacaagtgacaaatgcatgt
aagaagtacggcggtttctatcttggaagcattggtggacctgccgctatcttggcaaag
aattgtatcaagaatgtagaagtgttggataatgaggaggatggaatggaggctgtttgg
aagatcgacgtggaggattttcctgcctttattgttgttgatgacaagggagacgacttc
ttcaaagagtggcttggatga
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