Thalassiosira pseudonana: THAPSDRAFT_22477 Help Entry THAPSDRAFT_22477  CDS       T01078                                  Name (RefSeq) predicted protein   KO K10661   E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27] Organism tps  Thalassiosira pseudonana Pathway tps04141   Protein processing in endoplasmic reticulum Brite KEGG Orthology (KO) [BR:tps00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     THAPSDRAFT_22477  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:tps04121]     THAPSDRAFT_22477 Enzymes [BR:tps01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      THAPSDRAFT_22477 Ubiquitin system [BR:tps04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    March proteins     THAPSDRAFT_22477 SSDB OrthologParalogGFIT Motif Pfam:  MARCHF6_C NDPSase_N Motif Other DBs NCBI-GeneID:  7451391 NCBI-ProteinID:  XP_002289545 JGI:  22477 UniProt:  B8C0K8 LinkDB All DBs Position 4:<2187020..2191578 Genome browser AA seq 1332 aa AA seqDB search MPASAEDYNDPYLDDGSDNDDEEEDECRVCRGPAEVGLSNLMAGGDKRRCYIYHGWMVKI RGVGERWEDWDLVKRDVVGGVVIALIVVVSFLSLMSLAEFLRFQWGGEGGGEGVGGGQRQ QQQQRRPGFPRRRRDNGGGDDRGNRREGPPPIEGAIDAIVQPTGQFENNNNGSDQMDGEI DDAQLKGTFEGLKMQEELGERLVMQMIRGDSGVNNSLRRIKLGGANENAQNDALEADQQW IEQNGAAAVDDAGEAGELNRNDNAEEDPIENEVPPPLDANDEDDIFEAFLRAQEEQAVED EEHQQQQMEDRDEVQQEPIFPPREDRQNRRPRDDARFEPQFEPLQPAFGFERNDQDEDDG IDMEVNLALDELLGFRGPVLALVRNLLWLLIFNTAYLGVFAFMPSTFGSGFFALLSKIPM LSSFVSSIPGTSKLLSVFVALDEKSRESNMIFLPSQIAKIGVGYLAASCTTFLFSAVVSF ASREQATVTDGERENVERPRGVADNFPIEQDEFFRQNMRNERDEAVQQIAELEAAGAVRI RLSVVLECASAIAKVVILLCIKMLLLPLSLGICLDMTTLPLFDKTLDDRIAYAGTDLFGS IFLHWVSGITFMLLVTVSVLQLREVVHPEILARVIRPQEPQPDLLGNLLQENGPTHAKRI LLSLGIYAALLTLHIWLPSHLLVSFNLGKKLPFFRPKLWHFFMPQIQVPAELFLFHLCML SILEKYKNNIGALQHHWLRVMGSLLGMSDKVLPREVDQFELVGCIPVFAATEDDADAKPS ASTKGSSNIDPFWTELLSTVDTTKREAIIRSKVSSMDRAAKPTIRLDTVTRPDGKKDVSR YSFIRFPSTSSDSNRVSKSSDETNSHLLPACVGPYRLKQAVLQKSTKSTHVTVIEIWREM PGKLIPRPPEGWDDLGIGGAESQGRWAWGDEHLSEVESSVAVRHPFYYDSDSKAAKMRGA VQFTAKMATLLFISWMAITVLLCVALNIPLYLGHFAFHLLRVPERCFHDPLAFAIGIGLM LPMIGVASNVCSSVSNEGLKGVLLLPWNWIRSFKPHQSRAKVIALTSFFVLWCVVCPLLL GSLYVTFFVGFNAQWLTSGLHENAFSLLASWATGTMLLNSWAAMCYFKMFTKDFWADLAV GDGQGNANGANANGVVQGAARRGAANNAPANAANAVGQGNDALRDTQDRCLTWQGEDGSF GCCYNSIKAFASSWEWDKVDTKALLQDCVVPIVRNLLVAMLVPLLATPLVIFVYLAINES SKLLEGMTEDQSTCTVLFRVFAISSVIVQFLNSSKHSLGKWYDAAHKIARDDRYLIGEIL LNYEAPVPFTAS NT seq 3999 nt NT seq  +upstreamnt  +downstreamnt atgccagcctccgccgaagactacaacgatccctacttggacgacggcagcgataatgat gatgaagaggaggatgaatgtcgtgtctgtcgtggccctgccgaagttggattgtctaac ctcatggctggaggtgacaagaggagatgttatatctatcacgggtggatggtcaagatt aggggagtgggtgaacggtgggaggattgggatttggtgaagagggacgtggtgggagga gtggttattgctcttattgtggtggttagtttcttgagtttgatgagtctagcggaattt ttgaggtttcagtggggtggtgagggtgggggagagggtgtcggtggtggacaaaggcaa cagcaacaacaacgacgaccggggtttccgagacgacggagagataatggaggtggtgat gatagggggaatcggcgggaggggcctccgccgattgaaggggcgattgacgctattgta caaccgactggtcaatttgagaacaataataatggtagtgatcaaatggatggggaaatt gatgatgctcaattgaaaggcacatttgaaggattgaaaatgcaggaggaactgggagaa cgactggtcatgcaaatgataagaggtgactcaggagttaacaattcgttacgaagaata aaacttgggggtgccaatgaaaatgcgcaaaacgatgctcttgaggctgatcaacaatgg atagaacaaaacggtgctgctgctgttgacgatgcaggagaagctggtgaattgaacaga aacgacaacgctgaggaagatccgattgaaaatgaggtgccacctccgttggacgccaac gatgaggatgatatctttgaagcattcctaagagctcaagaagagcaagctgtggaagat gaagagcatcagcaacagcagatggaggatcgtgatgaagttcaacaggagccaatattt ccaccgcgagaagatagacaaaaccgtcgtcctcgggacgatgctagatttgaaccacag tttgagccacttcaaccggcctttgggtttgagcgaaacgatcaagatgaggacgatggg atagacatggaagtaaacttggcattggatgagctgctagggtttcgtggcccagtgctt gcacttgtccggaatctgttatggctgctgatcttcaataccgcctacctaggcgtcttt gctttcatgccgtcaacgtttggaagtggcttctttgcactattgtcaaagatacccatg ctcagttcattcgtcagctcaattcctggaactagtaagctgctcagtgtcttcgtggcg ttggatgaaaagagcagagaatcaaatatgattttccttccttcacaaattgcaaagatt ggcgtgggctacttggcagcttcatgcacgacatttctctttagtgctgttgtgtctttt gcctctcgggaacaagcaaccgtgactgatggggaaagagagaatgtcgaaagaccgaga ggcgtagctgacaactttccgattgagcaagacgagttctttcgacaaaacatgcggaat gaacgggatgaagcggtgcaacaaattgctgaactagaggcagctggtgctgtcagaata cgactttcggtggttctagaatgtgcatctgcaattgcaaaggttgtgatactgctctgt atcaagatgctccttttgccactctcacttgggatatgtcttgacatgacaacgcttcca ttgttcgacaaaactcttgacgatagaatagcatacgctggcacggatctatttgggtca atttttctccattgggtttctgggattacgttcatgctgttggtgaccgtgtcagtgctt caacttcgggaggttgtacaccctgaaattcttgcgagagtgatacgtcctcaagagcct caaccggacttgctcggaaatcttcttcaagagaatggtccaacacacgcaaagaggata ctactatcactgggaatctacgcagcactgctgacactgcatatttggcttccatcgcat ctccttgtgtcgttcaacctgggaaagaagctgccattctttcggccaaagttatggcac ttcttcatgcctcagattcaggtcccagctgagttgttcctgttccatctgtgcatgctc agcatcctagagaagtacaaaaacaatattggggcgctacagcatcactggctacgcgtc atgggtagtctccttggcatgtcggataaggttctaccaagagaagtagatcagtttgag ctcgtgggctgcatcccagtctttgcagcaacggaggacgacgcagatgcgaagccatca gcatctacgaaaggaagcagcaacattgatcctttctggacagaactgctctcaacagta gacacaacaaagagggaagcaatcattcgttcaaaagtcagcagcatggatagagcggcg aagccaacaattcgcttagataccgtgacacgtcccgacggtaaaaaggatgtctccaga tattcattcatcagatttccttcaacgtcatccgatagcaatcgtgtctcgaagtcatca gatgagaccaactcccacctcttgccagcttgcgttggtccttatcgtctaaagcaagct gttttgcaaaagtcaaccaagtccactcacgttacagtcattgagatttggcgtgagatg ccaggtaaactgatccctcgaccacccgaaggatgggacgaccttggtattggtggagca gaaagtcaagggagatgggcatggggcgatgagcacctgtccgaagttgaatccagtgtg gctgttcgtcatccattttattacgattcggattccaaggcggcgaagatgcggggtgcc gttcagttcactgccaagatggcgacgcttctattcatttcttggatggcaataacggtg ttgctgtgcgtggccttgaacatacctttgtaccttggccactttgcctttcatttgtta agggttcccgaacgttgcttccacgatccgttggcctttgcgattggtatcggactgatg cttccaatgattggagttgcatccaatgtatgctcttcggtctcaaacgagggcctcaaa ggcgtgctgctgttgccgtggaactggatcagatccttcaaaccccaccaaagtcgtgca aaggtgatcgccttgacgtcattctttgtactatggtgtgtggtatgtccactgttattg ggatcgctttatgttacattctttgtcggattcaacgctcaatggctcacttctggtctg cacgagaatgcgttctctctgctggccagttgggcaacaggcacaatgcttctcaactca tgggctgcaatgtgctacttcaagatgttcacaaaagacttctgggctgatcttgccgtg ggagatggacaagggaatgcaaatggagccaatgctaacggggttgtccagggggccgcg cgtcgaggagccgcaaacaatgctcctgcaaatgcagccaatgccgttggacaagggaac gatgcactgcgtgatacacaagatagatgtttaacttggcaaggtgaagacgggtcattt ggatgctgctacaactcaatcaaagcatttgcttcgagctgggagtgggacaaagtggac acgaaggctttgctacaagattgcgtagtaccaatagtcaggaacctcttggtggcaatg ctcgtaccattgctggcgacgccactcgttatattcgtctatcttgctattaatgaaagc tcaaagttgcttgaaggcatgacggaagatcagtcgacgtgcactgtactattcagagta tttgctatctcaagcgtgattgtacagttcctgaattcatcgaagcactcgctaggaaag tggtacgatgcagctcacaagattgcaagagatgatcgatacttgattggtgagattctc ttgaactatgaggcaccggtgccgttcactgcatcgtaa

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