Thalassiosira pseudonana: THAPSDRAFT_22535
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Entry
THAPSDRAFT_22535 CDS
T01078
Symbol
RS11
Name
(RefSeq) RS11, ribosomal protein 11 40S small ribosomal subunit
KO
K02949
small subunit ribosomal protein S11e
Organism
tps
Thalassiosira pseudonana
Pathway
tps03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
THAPSDRAFT_22535 (RS11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tps03011
]
THAPSDRAFT_22535 (RS11)
Ribosome [BR:
tps03011
]
Ribosomal proteins
Eukaryotes
Small subunit
THAPSDRAFT_22535 (RS11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S17
Ribosomal_S17_N
CdiA_C
Motif
Other DBs
NCBI-GeneID:
7447253
NCBI-ProteinID:
XP_002290049
JGI:
22535
UniProt:
B8C1P3
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All DBs
Position
5:150958..151773
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AA seq
165 aa
AA seq
DB search
MPRLAREYKECDQHEKSYQSQDAIFVARKRSVNAKKVKPMRWVKNVGLGIKTPDAAIEGN
YVDKKCPFSGNVSIRGKILKGLVISTKMKRTIVVRRDYLHYIPKYRRFEKRHKNIHAHCS
PCFPVKEGDIVTIGQCRPLAKTVKFNVVAHEAQRESSGKKKFRMF
NT seq
498 nt
NT seq
+upstream
nt +downstream
nt
atgcctcgtctagctagggaatacaaggagtgcgatcagcacgaaaagtcctaccaatct
caggatgccattttcgtagcccgcaaacgcagcgtcaacgccaaaaaggtcaagcccatg
cgttgggtcaagaacgttggtctcggtatcaaaacccccgatgccgccattgagggcaac
tacgtcgacaagaagtgtcctttttctggaaatgtctccattcgtggaaagatcctcaag
ggattggtcatttctaccaaaatgaagaggaccattgtcgttcgtagggattaccttcat
tacattcccaagtaccgtcgttttgagaagcgtcacaagaacattcatgctcattgcagt
ccttgctttcctgtgaaggagggtgatattgtgactattgggcagtgccgtcctttggcc
aagacggtcaagttcaatgttgtcgcgcatgaggctcagagggagagctctggaaagaag
aagttccgtatgttttaa
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