KEGG   Thalassiosira pseudonana: THAPSDRAFT_22579
Entry
THAPSDRAFT_22579  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K12275  translocation protein SEC62
Organism
tps  Thalassiosira pseudonana
Pathway
tps03060  Protein export
tps04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    THAPSDRAFT_22579
   04141 Protein processing in endoplasmic reticulum
    THAPSDRAFT_22579
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tps04131]
    THAPSDRAFT_22579
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:tps02044]
    THAPSDRAFT_22579
Membrane trafficking [BR:tps04131]
 Autophagy
  ER-phagy
   ER-phagy recepters
    THAPSDRAFT_22579
Secretion system [BR:tps02044]
 Sec (secretion) system
  Eukaryotic Sec-SRP protein
   THAPSDRAFT_22579
SSDB
Motif
Pfam: Sec62
Other DBs
NCBI-GeneID: 7451730
NCBI-ProteinID: XP_002290091
JGI: 22579
UniProt: B8C1X7
LinkDB
Position
5:341612..343185
AA seq 318 aa
MVDAKEYYEDQKHLMKLCDFLRSGDGPAVREAIEMDKRVYYIKGEKLVNFLVEPKKGTKW
PKDLPKFKSRPDAIAVCKDLCNRQFMHRSEKVGKGELEISRVRDFDESAYFTWIYEGNKK
FSHLMTTCLVIGFLCCTCFPIWPNFLKVFVWYMSVSLLIFIFFLITFRALLFLMVWIIGY
ECWFLPNLFDEQLGFFESFVPFISIEKTKDGQLMYRAGVFVAFFSFCWWAVTQPSEFDGF
VKGQGDFIKDLYAGTLLSDMSQKDKENIDKPKMPSLEDLLKKLDSEDEEEKELSEEEAAE
ALLESLVGDEEDIEDDEE
NT seq 957 nt   +upstreamnt  +downstreamnt
atggtggacgccaaggaatactacgaggatcaaaagcacttgatgaaactatgtgacttt
ctgaggagcggagatggtcctgcagtaagggaggcgattgaaatggataagcgggtgtat
tacatcaagggagaaaaactggttaatttcctcgtagagccaaaaaagggtaccaaatgg
cccaaggatctacctaaatttaagtctcgtcccgatgctattgcggtatgcaaggatttg
tgtaataggcaatttatgcatcggtcggagaaggttggaaagggggagctggagatctct
cgggttcgcgactttgacgaatcggcctacttcacctggatatacgaaggaaacaagaag
ttcagtcacctcatgacaacatgcctcgtcatcgggttcctctgctgcacctgctttccc
atttggccaaacttcctcaaagtattcgtatggtacatgtcggtgtcactgctcattttc
atcttcttcctcattaccttccgagcattactctttctgatggtttggatcattggctac
gagtgctggttcttgccgaatctgtttgatgaacaattaggcttctttgaatcattcgtg
ccttttatatcaattgaaaagacaaaggatgggcagttaatgtacagggctggagtcttt
gttgccttcttctccttctgctggtgggctgtcactcagccttcggagtttgatggcttc
gtcaaggggcaaggggactttatcaaagatttgtatgcggggacattgctttcggatatg
tcacagaaggataaggagaacatcgacaaacccaagatgccctcgcttgaggatcttctt
aagaaattagactctgaggacgaggaggagaaggagctttcggaggaagaagccgcagag
gctctgttggagagtcttgtcggagatgaagaagatattgaggatgacgaggagtag

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