Thalassiosira pseudonana: THAPSDRAFT_22610
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Entry
THAPSDRAFT_22610 CDS
T01078
Symbol
RL4e
Name
(RefSeq) RL4e, ribosomal protein 4e 60S large ribosomal subunit
KO
K02930
large subunit ribosomal protein L4e
Organism
tps
Thalassiosira pseudonana
Pathway
tps03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
THAPSDRAFT_22610 (RL4e)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tps03011
]
THAPSDRAFT_22610 (RL4e)
Ribosome [BR:
tps03011
]
Ribosomal proteins
Eukaryotes
Large subunit
THAPSDRAFT_22610 (RL4e)
Archaea
THAPSDRAFT_22610 (RL4e)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L4
Ribos_L4_asso_C
HEAT_Maestro
PpPFK_gamma-like_C
Motif
Other DBs
NCBI-GeneID:
7449695
NCBI-ProteinID:
XP_002290123
JGI:
22610
UniProt:
B8C239
LinkDB
All DBs
Position
5:465732..>469830
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AA seq
378 aa
AA seq
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MAARPLVSVFSLTGEKAGETTLPEVMTAPMRTDIVQFVHTNMNKNNRQAYAVNVHAGKLV
SAESWGTGRAVARIPRVGGGGTSRSGQGAFGNMCRGGRMFAPTKTWRKWHRKINVTQKRY
AVASALAATAVPALVMARGHKVDDVPEIPLVLDNTLESAKKTSAAKDILAAVGALADVEK
AADSKKIRAGKGKARNRRYTLRRGPLVIYKSNDGVEQAFRNLPGVELCCVDRLNLLQLAP
GGHMGRFCIWSQAALDALNTIYGKEGKSIPEDLMANADLARIINSDEIQSVLNPAKRANK
KFLRKKNPLTSIKALAKLDPYAAAARESEQRAEAARKDQKAAILKKRRETAKEDSLIVVF
AGVLKICSRLRMNIGTGI
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggccgcccgtcccctcgtctccgtcttctccctcaccggagaaaaggcaggtgaaacc
accttgcccgaagtcatgaccgcacccatgcgtaccgacatcgttcagttcgtgcacacc
aacatgaacaagaacaaccgtcaggcctacgccgtcaacgttcacgctggaaagttggta
tcggctgaatcctggggtaccggacgtgccgtggctcgtattccccgtgttggaggaggt
ggtacctctcgttctggacagggagctttcggtaacatgtgtcgtggtggacgcatgttc
gctcctactaagacgtggcgtaagtggcaccgtaagatcaatgtcacccagaagagatac
gccgtggcatctgctcttgctgccactgccgttcctgctcttgtgatggctcgtggacac
aaagtcgatgatgttcctgagattcctctcgttttggacaacacccttgagtctgccaag
aagacctccgctgccaaggatatcctcgcagctgttggagctcttgctgacgtcgaaaag
gctgctgactcgaagaagattcgtgctggtaagggtaaagcacgtaaccgtcgctacacc
ctccgtcgtggacctcttgtcatttacaagtccaacgacggtgtcgagcaagcgttccgt
aacttgccaggagttgagctctgttgcgttgaccgtctcaacctcctccagctcgctccc
ggtggacacatgggacgtttctgcatctggtctcaggccgccctcgatgccctcaacacc
atctacggaaaggaaggcaagtccatccctgaggacctcatggccaacgccgacttggct
cgtatcatcaactccgatgagatccaatctgttctcaaccctgctaagcgtgccaacaag
aagttcctccgcaagaagaaccctcttacctccatcaaggctcttgccaagcttgatcct
tatgctgctgccgctcgtgagagtgagcagagggccgaggctgctcgtaaggaccagaag
gctgctatcttgaagaagaggcgcgagactgccaaggaggatagtttgatcgttgtcttc
gccggcgtcctcaagatatgctcaagattgagaatgaacataggaactggtatttag
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