Thalassiosira pseudonana: THAPSDRAFT_22708
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Entry
THAPSDRAFT_22708 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
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Gene cluster
GFIT
Motif
Pfam:
CBM96
CBM_14
Izumo-Ig
PT
Motif
Other DBs
NCBI-GeneID:
7450039
NCBI-ProteinID:
XP_002290678
JGI:
22708
UniProt:
B8C2R1
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Position
5:complement(1030168..1032949)
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AA seq
791 aa
AA seq
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MDSSSSSNDTSVSAPQHELIDMHRSRRRSSSKAIRQQPRTTSMVSTTTMKCSSSTISTAA
LLAITLSSSSTTKTMAQPFSNDDANLTCPPSHNGWSPSSDCKSYFWCSGGALSSIPYDCT
EGLLFDMTTVTCLPEGEVDCSGGADVAEGGDGAVDGTNHNNEGAPPSSSNNSNKPPPSPR
PSSLGLPIYYVDFPSQSCLSSLTHTPSSWVTSEHMYSTKINCCEEMMDWIPLERCLGVSD
VAMWSEDNFVWEPTRSPSGSPTISPSARPSVSPSEYQLEEADWCVFMLISPSYEPTGRPT
KSPSLQPSQAPNNTPTTSPSFQPTGNPTVFKSLAPTTSPSIDRIAMMHEQLTFASAVQDG
YLVELIGWANDGLGESGGETFSAETLSMYHEKLVTDEPTASPVDPIVVKDASVSELMLPV
VADATISKQRPSVNFGSHQALAVDGGNPSALQGDSNGERFDSLLKFDVSLVDHSRPVESA
TLRLYIVEGCKSGGTFQTTTDSTWESSTVTWDSAPSSDGNFIGRLPTITAEQWYDVDVTS
ALSWHDALSGNASYMSIRIESDENSRCLYSSMESGDAMSPRLMVQYMEQTMFASPQVEEV
VVEEAPGLISPLESIIPPVQGDFILLRATDDVTIVATNPTRNFGTEDNLLLAFDTNTRGI
FDILIRFDLREMFNSPPRSAVLSLFAEVDCDSAGAFASTSGAGEWSEDTVTWANAPIFSP
HANDGSGGKQIGTFGAVQANAWYGFNVIAAVMDAVKNKKEAVTFRLSSGNLSSCQFSSRN
GGRGPKLMVAF
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggactccagctcatcatcaaacgacacctctgtatcggcgccgcagcatgaactgata
gacatgcaccgcagtcgtcgtcggtcttcgtccaaggcaattcggcagcagccccgaaca
acttcaatggtgtcaacaacaacaatgaaatgctcttcctccaccatttccaccgctgcc
ctcctcgccatcaccctctcatcatcctcgacaacaaaaacgatggcacaacccttctca
aacgacgatgccaatctaacctgtccaccgtcacacaacggctggtctccctcctccgat
tgcaaatcgtacttttggtgcagcggtggagcgttatcgagcataccgtatgattgcacg
gaggggttgttgtttgatatgacgacggtgacgtgtttgccggagggagaggtggattgt
tcgggtggtgcggacgtcgccgaaggtggagatggagcagttgacggcaccaaccacaat
aatgaaggtgcaccaccctcctcatccaacaatagcaacaaaccgccaccctccccccgt
ccatcctccctaggtttaccgatctactacgtagattttccatcgcaatcctgtctctcg
tcgctcacccacacgccctcctcgtgggtaacgtccgaacacatgtattccaccaaaatc
aactgctgtgaggaaatgatggattggattccgttagagaggtgtttgggtgtgagtgat
gtcgcaatgtggagtgaggacaattttgtttgggagcccacgaggagtcctagtggaagt
ccgacgattagtccgagtgcgaggcccagtgtttcgcccagtgagtatcaactggaagag
gctgattggtgtgtctttatgttgatttcaccgtcgtacgaaccgacaggacgaccaacc
aagtcaccctcccttcaaccctcacaagcaccaaacaatacccccacaacatctccatcc
tttcaacccaccggcaatcccacggtctttaaaagcctcgctcccaccactagtccaagt
atcgacagaattgccatgatgcatgaacagttgacgtttgcaagtgctgtccaggatgga
tacttggtggaacttatcggatgggcaaacgacgggttgggcgaatccggcggggaaacg
ttcagtgccgagactttgagcatgtatcacgaaaagctcgttaccgatgaaccaactgcc
tcaccggtagacccgatcgttgtcaaggatgcgtccgtatccgaattgatgcttccggta
gttgccgatgcaaccatctccaagcaacgaccctccgtcaactttggctcacaccaagca
ctcgccgtggacggaggcaatccctccgcacttcagggtgattccaacggggagagattt
gactccctcctcaagtttgatgtttctctcgtggatcactcgagaccagtggaaagtgcc
acgctgcgattgtacattgtcgaaggttgcaagagcggtggtacttttcaaaccactacc
gattctacgtgggagagctctacggttacttgggactcggctccatcgtctgatggtaac
tttatcggacgtctgccgaccataaccgccgaacagtggtacgatgtcgatgtcacctcg
gcgttgtcatggcacgatgccctctccggcaatgctagctacatgtccatccgtattgag
agtgatgagaacagtcgttgtttgtactctagtatggagagtggagatgccatgagtcca
cggttgatggtgcagtacatggagcagacgatgtttgcttctcctcaagttgaggaggtt
gtggtggaggaagcaccgggcttgatttctcccttggagtccatcattccacctgttcaa
ggcgactttatcctccttcgtgccaccgacgatgtgactattgtggctactaaccccaca
cgtaactttggcaccgaggacaatctcttgttggcatttgataccaacacccgtggcatc
tttgacattttaatacgcttcgatctccgtgaaatgttcaacagtccaccacgatcagcg
gtattatcattatttgccgaggtagactgcgattcagcaggcgccttcgccagtacaagt
ggtgctggcgaatggagcgaggacactgtaacttgggcgaacgcaccaatcttttctcct
cacgctaacgatggaagcggaggcaaacaaataggtacctttggagccgtgcaggctaac
gcatggtatggattcaatgtcattgcggcagtgatggatgcagtgaaaaataagaaggag
gcggtgacttttcggctaagttctggcaatttgagctcatgtcagttctcgtcgaggaat
ggaggtagagggcccaagttgatggtggccttttaa
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