Thalassiosira pseudonana: THAPSDRAFT_22848
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Entry
THAPSDRAFT_22848 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
Response_reg
HisKA
PHY
GAF
PAS_2
Motif
Other DBs
NCBI-GeneID:
7448193
NCBI-ProteinID:
XP_002290811
JGI:
22848
UniProt:
B8C3H5
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Position
5:complement(1711866..1715953)
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AA seq
1074 aa
AA seq
DB search
MSVKKSTSPSEKRDVPTECEKEPIHIINRIQPCGYLVNVDRNLNIVQCSANAVELLPPEQ
VKIIFSHWKSKQECINEDEQDDFDFDSTEGKDFFKFANDKNQNREDAKKRKAALDFMIGK
PLGLIFGAEHVSQVKDVIENVIMTSGGGGGSASSSGERHSLPSFIQPPSKRRVSDDNFLL
RSESTLSLSGRISCSVLPSSQNFLLELEKTPLLEKYTQFEDRDVMSFMEEIAKELRACWS
IEEMASLVCAKVMQETPYDRGMVYKFDHEDCGEVVYEAFRSDASEACRKDSFLGLRFPAS
DIPRQARELFMRNTLRVVYDVDGNDFELYPPMVDIKRASGEKELGYTDLSMCRLRGSSFV
HLKYLKNMGVTSTMVIAIIVNGRLWGLYSFHGYREPLVPSARTRFLCEMASITTSIIMES
LTRKESNERLMSLDSLMNSLQTTSLSNFVETNLSDIMGALQVNLISFRVRDPPATPEIKT
FLDETDGKMESPDEITNEVFDSLVETYGSVCRDYGVVYIDDQKSNTLLVNRGIHTLVFFR
TSGVDVILSRNRTIERVTWGGDPDKQLEPDGTLTPRNSFAAYVEDHFKKGKPWDATDRQL
ISRFSDQLEKHRTKELNLEHSKTIKTLEKEKAEATETARVNFDFFAHMAHELRTPFHGMV
GSLEAMREDPVLRNNEMLKTAELCGKSMIKILDDILLVAKGSYDLQIEEHLFDLKSFVKI
TANDMSSFALMEGAPIQLGKELIFCKDLVGDSQRIRQVMNNLLSNAIKFSEDSISLDVVQ
KNSFSEVLAVWKTYSNVYPNCEPTLLELSTFVAEASEASVDTIWVIFSIVDKGIGITGPD
LKKLGTAFTQLSSGRQKKYQGTGLGLNICNMLVGALGGKLVMFSAKGLGSCFTFAVPVKK
SDVPVAEPEVEESQNEKAKKMEALQEEFDAFGFREKGVRIFVVDDSAINRKLCGRKIRRW
MPSVTIKECSSGSSALAEYEKSPKDVMGIFMDYHMQDMDGDECTRRIRECESMREDLPNV
YIVGYTADVLEDSTGRLMESGMNSVMPKPEPPRAIEEELRKMMNWYNENHKNER
NT seq
3225 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcaaaaagagcacatcgccatccgagaaacgtgacgtgccgactgagtgtgag
aaagagcctattcatatcatcaacaggatccaaccctgtggctacctcgtcaacgtggac
cgtaatctaaacatcgtccaatgttcagccaacgccgtggaactgcttcctcccgagcaa
gtgaaaatcatcttttctcattggaagtccaagcaagaatgcatcaacgaagatgaacag
gacgactttgactttgattcaaccgaaggcaaagacttcttcaaattcgccaatgataag
aaccagaacagagaggatgccaaaaagagaaaggctgcgttggatttcatgattggcaag
cctctgggattgatctttggagcagagcatgtgagtcaagtgaaagatgttattgagaac
gtcatcatgacgagtggaggcggtgggggttcagcttcttcctctggtgaaaggcactcc
cttccttccttcattcagcccccaagcaagaggcgtgtgagtgatgacaacttcctttta
cgctctgagagtaccctttctctttcggggcgtatctcctgttctgtacttccatcgtcg
cagaactttctcttggaacttgagaagacacctctgttggagaagtatactcagtttgaa
gaccgagatgttatgtctttcatggaggaaattgcaaaggagcttcgtgcatgttggagt
attgaagagatggcatctcttgtttgtgccaaggtcatgcaggaaacgccgtacgatcgt
ggaatggtgtacaagtttgaccatgaggactgtggggaagtggtgtacgaggcatttagg
tccgatgccagtgaggcgtgtcggaaggatagctttttaggattaagatttccagcgtct
gatatccctcggcaagcgagagagctcttcatgcgaaacacattgcgggttgtgtatgat
gttgatgggaatgacttcgagctctaccctccaatggtagatatcaagcgtgcctctggg
gagaaggaactaggatatactgatttgagcatgtgccgtcttcgtgggagcagttttgtt
catttgaagtacctcaagaacatgggagttacctctacgatggtaattgcaatcattgtc
aacggaaggttgtggggattgtactcattccacgggtatcgtgagccgttagtcccttcg
gctaggactcgcttcttgtgcgaaatggcatcaattacgacctcaatcataatggagagc
cttacccggaaagagagcaatgaaagactgatgagtttggatagccttatgaacagtcta
cagaccacttccttatcgaactttgtagagacaaacttgtcggacatcatgggtgctttg
caggtgaatctcatttcttttcgtgttagagatccacccgctactcctgaaatcaagact
tttttggatgagacggatggaaaaatggaatctcctgatgagataacaaacgaggttttc
gactcacttgtcgagacgtacgggtccgtctgccgggattacggcgtcgtctacattgat
gatcagaaaagcaatactctccttgtcaatagaggcatccatacactcgtgttcttccga
acatcgggtgttgacgttatcctttcgcgaaaccggacgattgaacgtgtcacgtggggt
ggagaccctgataaacagcttgagccagatggaacattaacacctcgcaactctttcgca
gcttatgtcgaagatcacttcaaaaagggcaaaccgtgggatgctacggataggcagctc
atatcgcggttcagtgatcagttggagaagcaccgcacaaaagaacttaacttggagcac
agcaagacgatcaaaactctagagaaagagaaagcggaggccacggaaacggctcgcgtg
aactttgacttctttgcgcacatggcacacgaattgcgcacgccattccatggcatggtt
ggaagcctagaagcaatgcgggaagatccggtgttacgaaacaatgaaatgctgaagacg
gcggagctctgtggtaaaagtatgattaagatcttggacgacattttgttggtggcaaag
ggctcatacgaccttcagattgaagagcacttgttcgatctcaagtcatttgtcaaaata
actgcaaacgacatgtcatcgtttgctcttatggagggggcgcccatacagcttggcaaa
gaacttattttctgcaaagatttggttggagatagccagcgtattcgtcaagtgatgaat
aacttgctatccaatgcaatcaaattttcagaggattccataagtctggatgttgtgcag
aagaattcgttttcggaagtgttggctgtttggaagacttattccaacgtgtatccaaat
tgtgaaccaacactgttggaactttccacctttgtggcagaagcatctgaagcgagtgtg
gatacgatttgggttatattctctattgtcgacaaaggtattgggataactggccccgat
ttgaagaagttgggaactgcattcacacagctatcctcaggaagacagaagaagtatcaa
ggaacggggcttggattgaatatctgcaatatgctggttggtgcactcggaggaaagctt
gtcatgtttagtgcaaaaggattgggatcgtgcttcaccttcgcagttcctgtgaagaag
agtgacgtcccagtggctgaaccggaggtggaagaatctcaaaacgagaaggcgaaaaag
atggaagcacttcaagaagaatttgatgcgtttggattccgtgagaaaggagttcgtatc
tttgttgtagacgatagtgctatcaaccgaaaactttgtgggagaaagattcgaagatgg
atgccctctgtcaccatcaaagaatgttcgagcggtagttctgcgttagcggagtatgaa
aagtctcctaaagatgtgatgggaatattcatggattatcacatgcaagatatggatgga
gatgagtgcacgagacgtattcgtgagtgtgaaagtatgcgcgaggatttgccgaacgtg
tacatcgtgggatacacagcagacgttttagaggatagcacagggcgattgatggaatcg
ggaatgaacagcgtgatgccaaagcctgagccgcctagagccattgaagaggaattgagg
aagatgatgaactggtacaatgagaatcacaaaaatgaacgatga
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