Thalassiosira pseudonana: THAPSDRAFT_23052
Help
Entry
THAPSDRAFT_23052 CDS
T01078
Name
(RefSeq) predicted protein
KO
K21768
tubulin-specific chaperone E
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tps04812
]
THAPSDRAFT_23052
Cytoskeleton proteins [BR:
tps04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Others
THAPSDRAFT_23052
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
LRR_4
LRR_9
Ubiquitin_2
LRR_8
Motif
Other DBs
NCBI-GeneID:
7443567
NCBI-ProteinID:
XP_002291399
JGI:
23052
UniProt:
B8C5G5
LinkDB
All DBs
Position
6:complement(616197..618154)
Genome browser
AA seq
625 aa
AA seq
DB search
MISAVDLRPNITRVRDPSGFIGTVLYVGPVASAKSTSEIYAGISWDDVTRGKHDGSVICR
TTNQLVRHFKCGPTQGSFLRLSKVDVGVALSPELMRSRYVKPGAELVAPDNILPHVARTA
GGRDKAIEFWGEIKIRNRQQLEVVEEISLRMLGISGPCSKELQFEMEEFGHLRGIDLAGN
LLSDWEDVLTILRQFPKLQNVSVASNRINDLGSTSSIGEFPHIRSLNLNNCNISSFQTLR
LIGKAMPNLEELCVAHADLSDIEQHTPDTDTIEELFPNLILLDLSDCKLTSWENHIQPFR
NLPMLESLILNLNAIDSIVVPESDNTRAPFPSLASLQIAGNPLPSWTALDDLNSITSLRS
LRLRSTPLTNLLGVGEVRSTAIARFPSLEFFNASPISERERNEAERRYVSTVARELLLIS
SGALLSTNNNGLGTVDSSGDSEVDAKQAEVFARHPRFKHLMTKHKDTMMALNSSAAGTDS
SGSGKIGEDVINVTIRSMAASSCDVEPLQKRLPRSLQVGRIKAMCARAFGLDIDLQILHF
RIEGDPFPTELDDADHSLVYYGVTDGAEILVNEVDVEAQKRERARQEEDHKRRIEQQEQH
VTVLQSMQKSDHRINLIATEMSQKI
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatctcagccgtagacctccgcccaaacataacccgcgtccgagacccatccggcttc
atcggcacagttctatacgtcggtccagttgcctccgccaaatccacctcggaaatctac
gccggcatctcctgggatgacgtcacgcgaggcaagcatgatggctctgtgatttgtcgg
actaccaatcagctcgtgaggcatttcaaatgtggacctacgcaagggtcgtttttgcga
ttgtccaaggtggatgtcggggtggcgttgtcgccggagttgatgaggtcgagatacgtc
aagccgggtgcagaattagtggcacctgacaacattctcccacacgtggcgcggactgct
ggtgggagggacaaggcgattgaattctggggagagatcaagattagaaacagacagcag
ctggaggtggtggaggagatttcacttcgaatgttggggatttcgggaccgtgtagcaaa
gagctacaatttgagatggaggagttcggacacttgaggggaattgatctggcgggcaat
ttactatctgattgggaggatgtactgacgatactgcggcaatttcccaagctgcagaat
gttagtgtagcatccaaccgcatcaacgatttgggatctacatcgtccattggagagttc
ccacacattcggtcactgaacttgaacaattgcaacatcagctcgtttcagactctacgg
ttgattggcaaagcaatgcccaatttagaagagctttgtgtagcccatgcggatctatct
gatattgaacaacacacacccgatacggatacaatagaagagttgtttccgaatctgatt
ctattggatctctcggactgcaaactgacttcgtgggagaatcatattcagccctttcgc
aacctacctatgttggagtcactcattctcaatctcaatgccattgattccattgtggtt
ccggaaagtgataacacaagagctccgtttccttcacttgcttctctgcagattgctggc
aatccgctcccatcttggactgccctcgatgatctcaacagcatcacttctctccgatca
cttcgtctgcgaagtactccgttgacaaacttgttgggagttggtgaagtacgaagcacg
gccattgcaagatttccatcgttggagttcttcaatgcatcacccatttcagagagggaa
cgcaatgaggcagaacgtcgttatgtcagtacggtggctagggaactgttattgatatcg
tctggggctctcctttcgacaaacaacaatggtttaggtacagttgacagtagcggggat
agtgaagttgatgcgaagcaagcagaagtctttgctcgtcaccctcgcttcaaacacttg
atgactaagcacaaagacacaatgatggctctcaactcgagtgctgctggtactgattca
tcaggctcgggcaagattggcgaagacgtcatcaatgtaacaatccgttccatggctgct
tcaagttgtgatgtggagcctctacagaagcgtcttccgaggagtttgcaagtgggtagg
atcaaggcaatgtgtgctcgtgcctttgggttggatattgacttgcagattttgcatttc
aggattgagggagatccatttccaacggagcttgacgacgcagaccacagtttggtatat
tacggggtgacggacggagcggagattctcgtcaatgaagtagatgtcgaggcacaaaaa
agagaaagggcgaggcaggaagaggaccacaaacgtcgcattgaacagcaagagcaacac
gtcactgtgttgcaatcaatgcaaaagtctgaccaccgtatcaacctgattgcaacggag
atgtcgcaaaaaatctga
DBGET
integrated database retrieval system