Thalassiosira pseudonana: THAPSDRAFT_23102
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Entry
THAPSDRAFT_23102 CDS
T01078
Name
(RefSeq) t-complex chaperonin protein, epsilon subunit
KO
K09497
T-complex protein 1 subunit epsilon
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
tps03110
]
THAPSDRAFT_23102
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tps03037
]
THAPSDRAFT_23102
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_23102
Chaperones and folding catalysts [BR:
tps03110
]
Heat shock proteins
HSP60 / Chaperonin
THAPSDRAFT_23102
Cilium and associated proteins [BR:
tps03037
]
Primary cilia and associated proteins
BBS-CCT complex
THAPSDRAFT_23102
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
THAPSDRAFT_23102
Exosomal proteins of colorectal cancer cells
THAPSDRAFT_23102
Exosomal proteins of bladder cancer cells
THAPSDRAFT_23102
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CPT
Motif
Other DBs
NCBI-GeneID:
7443622
NCBI-ProteinID:
XP_002291060
JGI:
23102
UniProt:
B8C5R2
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All DBs
Position
6:867878..870049
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AA seq
543 aa
AA seq
DB search
MSMVYDEYGRPFIILKEQQAKARVKGLEAVKSNILAATSISKILRSSLGPKGMDKILVSP
DGDVTITNDGATILNRMHVDHEVAKLMVELSSSQDDEIGDGTTGVVVLAGSLLEQAEKLL
ARGIHPVRIAEGYEKAADVAIATLNDIADRVEFTKDNVEPLVTTAMTTLSSKIINVDKRK
MAEISVNAVLGVADLDRKDVNFDMIRMEGKPGGSLEDTELVNGIVIDKDISHPQMSKTIK
DAKMCILTCPFEPPKPKTKHKLDINTKEAYEKLYKQEQDYFKEMVQQVKDCGANLVICQW
GFDDEANHLLLQNDLPAVRWVGGVEIEHIAIATGGRIVPRFSELSAEKLGKAGMVREVSF
GNTKERMLVIEDCANSNAVTILVRGGNKMIVDEAKRSLHDAMCVVRNLIKDNRVVYGGGS
AEIACSVAVSKHADTVAGVDQYAIRAFADALDDIPLALAENSGLSPIEEVAAAKSRQLKE
GCPFIGLGITQDPTEDGYHYCNMKDVGVFETLIGKQEQIQLATQVVKMILKIDDVIAPSG
QQH
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtccatggtctacgacgaatacggcaggcctttcattattttgaaagagcagcaagcc
aaggctcgtgtcaagggattggaggctgtcaagtccaacatcctagcggctacctccatc
tccaaaattctccgctcctccctcggccccaaaggaatggacaaaatcctcgtctccccc
gacggagacgtcaccatcaccaacgacggagccaccattctcaaccgcatgcacgtagat
cacgaagttgccaaactaatggtcgaactatcctcctcccaagatgatgagattggtgat
ggtaccaccggtgtggttgtattggcgggatcgttgttggaacaggcggagaagttgttg
gctagggggatacatcccgttcgtattgcggaggggtacgaaaaggccgcggatgtggct
attgctactctgaatgatattgcggatagggttgagtttacgaaggataatgttgagcct
ttggtgactactgcaatgactacattgagttccaagattatcaatgttgacaaacgcaaa
atggccgagatttcagtgaatgctgttttaggagtggcagatttggaccgcaaagacgtc
aactttgacatgattcgtatggaggggaaacccggaggttctctcgaggatacagagctc
gtcaatggaatcgtgattgataaggatatctcccatcctcaaatgagcaagactatcaaa
gatgccaagatgtgcattctgacttgtccctttgagcctccaaagcccaagacgaagcat
aagttggacatcaatacgaaggaggcgtatgagaagttgtataagcaggagcaggattat
ttcaaagagatggtgcaacaggtgaaggattgtggggcgaatcttgtcatttgtcagtgg
ggatttgatgacgaggctaatcaccttctacttcagaatgatttaccggctgtgcgatgg
gtggggggagtggagattgagcacattgccattgctactggtggacgcatcgttcctcgt
ttctccgagttgagtgccgaaaagctcggaaaggccggtatggtgagagaggtatctttc
ggaaacaccaaagagcgtatgcttgtcattgaggactgtgccaactccaatgccgtgact
attctcgtgaggggaggaaataaaatgattgtggacgaggcaaagcgttctcttcacgat
gccatgtgcgtggtccgtaatctcatcaaagacaatcgtgtcgtttacggtgggggatct
gccgagattgcatgctctgtggccgtgagtaaacatgccgatactgttgctggcgtcgat
cagtacgccattcgtgcctttgccgatgccttagatgacattcctctcgcacttgctgag
aactcgggtctctcgcccattgaagaagtggcggctgcaaaatctaggcagttgaaagag
ggctgccccttcattggtttgggtattactcaggatcctacggaggatggataccactat
tgcaatatgaaggatgtcggtgtgtttgaaacactgattgggaaacaggagcagatacag
ttggctacgcaggttgtcaagatgattctaaagattgatgatgtgattgctcccagtggt
cagcaacactag
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