Thalassiosira pseudonana: THAPSDRAFT_23285
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Entry
THAPSDRAFT_23285 CDS
T01078
Name
(RefSeq) predicted protein
KO
K19683
tetratricopeptide repeat protein 30
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tps03037
]
THAPSDRAFT_23285
Cilium and associated proteins [BR:
tps03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
THAPSDRAFT_23285
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC3
TPR_12
TPR_19
TPR_2
TPR_16
TPR_14
TPR_7
TPR_6
TPR_1
Fis1_TPR_C
TPR_CcmH_CycH
Motif
Other DBs
NCBI-GeneID:
7444596
NCBI-ProteinID:
XP_002291227
JGI:
23285
UniProt:
B8C4I9
LinkDB
All DBs
Position
6:1767798..1769832
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AA seq
646 aa
AA seq
DB search
MQATRHTSTARVYDYIRDGEYEKAIEIFETNLDIPRTRPALSLLAYCSYHNQDYARAAEF
YEELVALCPETEEYQVYFTQSLVMAEAFLDATRVSSAITSSSSHSQRWLLLKAQAELEEG
LLSASTSTLARCMEDDPETILSLAAVEYRAGKYSNALEKCRIAKEIMGNLPMLSYFTALC
HYKLGQYDLAMDLVDGIIAVMREEQLGTDNPKFWQQESTFVVEAFNLKAALCHEEKQYHA
AKDVLKELCELHDDENLDTITIHNDAIINLEKDPSVGMQKLSYLLSNASFPPETLGNLLT
VYVSHGQEDAAAELFESNKQHINELIPPELYAYLNAAILSFSSPHEAYSMLETLVAKYTP
RLRASMKQLEVEAQASSSPASTSRPATASRKGAQSLADATQTYATLVEDYIPILMLQAKL
HWDEKQYERAEELLCKSADFCRGNDSWRLNMSHCLLAQQNKYEECIQYYELELLAKEESE
TDLLKVPANALANLCLAYVMTNQNEAAEAIMKAVEQEEHQQSAIGNERTYHSCMINLVIG
TLYCEKGNFEFGISRVCKSLEPFNKNLSQDTWFYTKRCLLTLASKVAKLMAVLKDNMIQE
IMYFLDDVETNCKQFVLDGEEVQLDSLTIIASEARQLKHIFIKLCA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcaagccactagacacacctcaacagcccgagtctacgattacatccgagatggcgaa
tatgaaaaggcgattgagatatttgagacaaacctcgacatcccacggacaaggcctgcc
ctctctcttctcgcctactgctcttatcacaatcaagactatgcacgtgcggcagaattc
tacgaagaacttgtagccctatgccctgagacagaagaatatcaagtctatttcacgcag
tctctggtcatggctgaagcatttctagatgcaactcgtgtgtcatcggctattacatct
tcctcctcccattcccaacgctggttattgctaaaagcacaagctgagttggaggaagga
ctactctccgcgagtacatcgaccctagctcggtgtatggaagatgacccagaaacgatt
ctatcacttgcagcggttgagtaccgtgctggcaagtactcaaatgcgttggaaaagtgc
aggattgcgaaggaaatcatgggcaaccttccaatgttatcgtactttactgccttgtgt
cattacaagctcggtcaatatgacttggcgatggatttggtagatggtatcattgctgta
atgcgagaagaacagcttgggacggacaatcccaagttctggcagcaagaatccacattt
gttgtagaggcctttaacttgaaggcggctctttgccatgaagaaaagcagtatcatgca
gcaaaagacgtactcaaagagttatgcgagcttcacgacgatgaaaatctggacaccatc
acgattcacaacgacgccatcatcaaccttgaaaaagatccatctgttggtatgcaaaag
ctaagttacctgctctccaatgcatcatttcctccagagacgctaggaaatcttctcact
gtgtacgtcagtcatggtcaggaagacgcagctgcagagttgtttgaatccaacaagcag
catatcaacgagctcatcccacctgaattgtatgcttacttgaatgcagcaatcttgtca
ttctcgtctccacacgaggcgtactcaatgttggaaactctcgttgcgaagtatacgccc
agactcagggcttccatgaagcagctcgaggttgaagcccaagcatcgtctagtccagca
tctacatcaagaccagctactgcatcgaggaaaggagctcaatccctcgcagatgccacc
cagacatacgccactcttgttgaagattatattcctatactaatgcttcaagccaaactg
cactgggacgagaaacaatacgaaagagccgaggagctcttgtgtaagagtgccgacttt
tgccgaggcaatgattcatggaggctaaatatgtctcattgtttgcttgcacagcaaaac
aagtacgaagagtgtatccaatactacgaacttgagctcttggcgaaggaagagtctgag
acagatctgttgaaagtgcctgcaaatgcgttggcgaacttgtgtttagcatacgtgatg
accaaccagaatgaggccgcagaggcaatcatgaaagcagttgagcaggaagagcatcag
caatcagcaataggcaacgagagaacgtaccatagctgtatgatcaatctcgtcattgga
acattgtattgcgagaagggtaactttgagtttggcattagccgtgtttgcaagagtctt
gaacccttcaacaagaatctaagccaagacacttggttctacacgaaacgttgcctccta
acactggcaagtaaagtcgcaaagctgatggcagttcttaaggacaacatgattcaggaa
atcatgtacttcttagacgacgtcgaaaccaactgcaagcaatttgttctagatggagaa
gaggttcaattagattctctgacaatcattgcttctgaagcacgccagctgaagcacatt
ttcatcaagctttgtgcgtaa
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