KEGG   Thalassiosira pseudonana: THAPSDRAFT_23285
Entry
THAPSDRAFT_23285  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K19683  tetratricopeptide repeat protein 30
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:tps03037]
    THAPSDRAFT_23285
Cilium and associated proteins [BR:tps03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex B1
   THAPSDRAFT_23285
SSDB
Motif
Pfam: ANAPC3 TPR_12 TPR_19 TPR_2 TPR_16 TPR_14 TPR_7 TPR_6 TPR_1 Fis1_TPR_C TPR_CcmH_CycH
Other DBs
NCBI-GeneID: 7444596
NCBI-ProteinID: XP_002291227
JGI: 23285
UniProt: B8C4I9
LinkDB
Position
6:1767798..1769832
AA seq 646 aa
MQATRHTSTARVYDYIRDGEYEKAIEIFETNLDIPRTRPALSLLAYCSYHNQDYARAAEF
YEELVALCPETEEYQVYFTQSLVMAEAFLDATRVSSAITSSSSHSQRWLLLKAQAELEEG
LLSASTSTLARCMEDDPETILSLAAVEYRAGKYSNALEKCRIAKEIMGNLPMLSYFTALC
HYKLGQYDLAMDLVDGIIAVMREEQLGTDNPKFWQQESTFVVEAFNLKAALCHEEKQYHA
AKDVLKELCELHDDENLDTITIHNDAIINLEKDPSVGMQKLSYLLSNASFPPETLGNLLT
VYVSHGQEDAAAELFESNKQHINELIPPELYAYLNAAILSFSSPHEAYSMLETLVAKYTP
RLRASMKQLEVEAQASSSPASTSRPATASRKGAQSLADATQTYATLVEDYIPILMLQAKL
HWDEKQYERAEELLCKSADFCRGNDSWRLNMSHCLLAQQNKYEECIQYYELELLAKEESE
TDLLKVPANALANLCLAYVMTNQNEAAEAIMKAVEQEEHQQSAIGNERTYHSCMINLVIG
TLYCEKGNFEFGISRVCKSLEPFNKNLSQDTWFYTKRCLLTLASKVAKLMAVLKDNMIQE
IMYFLDDVETNCKQFVLDGEEVQLDSLTIIASEARQLKHIFIKLCA
NT seq 1941 nt   +upstreamnt  +downstreamnt
atgcaagccactagacacacctcaacagcccgagtctacgattacatccgagatggcgaa
tatgaaaaggcgattgagatatttgagacaaacctcgacatcccacggacaaggcctgcc
ctctctcttctcgcctactgctcttatcacaatcaagactatgcacgtgcggcagaattc
tacgaagaacttgtagccctatgccctgagacagaagaatatcaagtctatttcacgcag
tctctggtcatggctgaagcatttctagatgcaactcgtgtgtcatcggctattacatct
tcctcctcccattcccaacgctggttattgctaaaagcacaagctgagttggaggaagga
ctactctccgcgagtacatcgaccctagctcggtgtatggaagatgacccagaaacgatt
ctatcacttgcagcggttgagtaccgtgctggcaagtactcaaatgcgttggaaaagtgc
aggattgcgaaggaaatcatgggcaaccttccaatgttatcgtactttactgccttgtgt
cattacaagctcggtcaatatgacttggcgatggatttggtagatggtatcattgctgta
atgcgagaagaacagcttgggacggacaatcccaagttctggcagcaagaatccacattt
gttgtagaggcctttaacttgaaggcggctctttgccatgaagaaaagcagtatcatgca
gcaaaagacgtactcaaagagttatgcgagcttcacgacgatgaaaatctggacaccatc
acgattcacaacgacgccatcatcaaccttgaaaaagatccatctgttggtatgcaaaag
ctaagttacctgctctccaatgcatcatttcctccagagacgctaggaaatcttctcact
gtgtacgtcagtcatggtcaggaagacgcagctgcagagttgtttgaatccaacaagcag
catatcaacgagctcatcccacctgaattgtatgcttacttgaatgcagcaatcttgtca
ttctcgtctccacacgaggcgtactcaatgttggaaactctcgttgcgaagtatacgccc
agactcagggcttccatgaagcagctcgaggttgaagcccaagcatcgtctagtccagca
tctacatcaagaccagctactgcatcgaggaaaggagctcaatccctcgcagatgccacc
cagacatacgccactcttgttgaagattatattcctatactaatgcttcaagccaaactg
cactgggacgagaaacaatacgaaagagccgaggagctcttgtgtaagagtgccgacttt
tgccgaggcaatgattcatggaggctaaatatgtctcattgtttgcttgcacagcaaaac
aagtacgaagagtgtatccaatactacgaacttgagctcttggcgaaggaagagtctgag
acagatctgttgaaagtgcctgcaaatgcgttggcgaacttgtgtttagcatacgtgatg
accaaccagaatgaggccgcagaggcaatcatgaaagcagttgagcaggaagagcatcag
caatcagcaataggcaacgagagaacgtaccatagctgtatgatcaatctcgtcattgga
acattgtattgcgagaagggtaactttgagtttggcattagccgtgtttgcaagagtctt
gaacccttcaacaagaatctaagccaagacacttggttctacacgaaacgttgcctccta
acactggcaagtaaagtcgcaaagctgatggcagttcttaaggacaacatgattcaggaa
atcatgtacttcttagacgacgtcgaaaccaactgcaagcaatttgttctagatggagaa
gaggttcaattagattctctgacaatcattgcttctgaagcacgccagctgaagcacatt
ttcatcaagctttgtgcgtaa

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