Thalassiosira pseudonana: THAPSDRAFT_2335
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Entry
THAPSDRAFT_2335 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TCR
F-box-like
F-box
Motif
Other DBs
NCBI-GeneID:
7446510
NCBI-ProteinID:
XP_002287247
JGI:
2335
UniProt:
B8BU26
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Position
2:740820..744625
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AA seq
1174 aa
AA seq
DB search
MSSRTRIGRWPNNENDDGDSNMPWEPIDPSVGVVGGDGGDASADNDVAAENTKTGGCQTN
PDADLPGSSSSAGVQSAQHDSSGVAPSSAAPLVDRQSQQSATGAANLAAGKTVATVDRRQ
HPDTSSSISDTANPLGIGEKIAPLDDSVHRQPHQRTSSEVETPRFQNEPSPSSSVTRLPE
QAAERATEPAVSLPMVTKTTRRKTFGTSNTSDHMDNPLNPPEPRGAATKASATTRTSEPL
TSRYERSPPSSDHSPSNNAYTHFQLPNSGSSGEEDMMDLFSPPVSSVLRIRNRGITNQVV
TAASTAVVGGQHQHQGQGLVAQTPIYHQHHHQLQHSYEQAQHQYFESSVAVKPAESAPAR
MPVSRQEQSMPSPTRPPHSERHDRDAAFNTDIHFDSDDYDNNPSLQLSFEESPETRPRSS
RIPDSASSKQSDAKREAQARFQQQQLHPPAHQQQATLQPPPPGYPPYQMYHYHYGAPPQP
PGSNQPQPMAIASPRGVPPVAYHYPADGSQPQMMLPPPGSLPYPPPQWADHYFMGYPPPP
PSHYQQPPPPPTPASGSRTPGKRKVRREDMNATMETAELSYEESVGGPVSPPSSKKKKDV
SLGVGTWPSPAQELVRDLMRGTLSSRRTPNDPGFDENSLSFGTTPGRMFPPSESWSPGGF
FEEEGILTEEADSFDIPAASPFGKRSALADLGNAQDADKQQLQPMPTPSRAGVTIRGSPI
LKKSERSVDQSQARAAPQPEETPSSSRHRSSVDDKKSSKQGNFQTPSASSIAGAFRFRIG
GVDASDAKKGINDINSVLRGSPVAPRTHPSNPGSLAHPPVMMAVAPTPTHPSSVSRMTTF
ETPAVAKRGGGGKENSENESTCKCKNSKCLKLYCDCFSAEKYCVGCKCIDCQNTPTFESI
RAKAIADTRARNPNAFKTKLNASVTEHATGCKCKKSECLKKYCECFANLVVCGESCKCSN
CKNYVGSQALIERRRKLKDAKGTELAMRPVARGWKGSMSDSKVAYGPGQSPVVHNPRMPH
PAATMMMSPMQPFAASPASSFPRPHGVYAHGAMIQSAQPHSAPRAAFSSSMATPAKQYTS
RMNPPRALVVSQTVIAAPAPSAAVVVRKARKRLQPPSIKVEAREAFFGPIQPKQTRSVAL
KVFSYLNNEELYCASIASKTWSSLAFDKALWPKK
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcatctcgaactagaataggacgatggcccaacaacgagaacgacgatggggatagt
aacatgccgtgggagcccattgatccttctgtaggtgtggtaggaggtgatggaggcgat
gcttcagctgacaacgacgtagctgctgaaaacacaaagacaggtggttgtcaaaccaat
ccagacgccgatttgccggggtcatcgtcttctgctggtgttcaaagtgcacagcatgat
agtagtggcgttgctccatcgtcggctgctccgttagtggatagacaatcgcagcagtct
gcgacgggtgctgcaaatctggcagcaggaaagacagtcgcaactgttgatagacggcaa
caccctgataccagcagcagtattagtgatactgccaatccattaggcattggtgagaaa
attgcaccgcttgatgatagtgttcatcgacaacctcatcagaggacttcatctgaagta
gaaacgccaagatttcaaaatgagccatcaccgtcgtcgtcggtcactcgactgccagag
caagcagcagagcgagcaacagagccagccgtctctcttcccatggttaccaaaacaact
cgtcgtaaaacatttggtacctccaacacatctgatcacatggataatccgctgaaccca
ccagagccgagaggtgctgccacaaaggcttcggcaacaaccagaacgtcagagccacta
acgtccagatacgaacgatctccaccctcctcagaccacagcccaagcaacaacgcctac
acgcactttcaactacccaacagtggttcgtctggggaagaagatatgatggatttattc
tcacctccagtgagtagtgtgttgaggatacgaaatcgaggtatcacgaatcaggttgtg
actgctgcttctactgcagttgttggaggtcagcatcagcatcaagggcaggggttggtt
gctcagacgcccatatatcatcaacaccaccaccagcttcagcattcatatgagcaggct
cagcatcagtattttgagagtagtgtggctgtgaaacctgcagagtctgctcctgcgagg
atgccggtatctcgtcaagagcaaagtatgccaagtccaactcgacctcctcactccgaa
agacacgatagagacgctgccttcaatacagacattcattttgattcagacgattatgac
aataatccatcattgcaactatcgtttgaggagagtccagagaccagacctcgtagttct
cggattcctgattctgcttcgtcgaaacagagcgatgcaaaaagagaagcacaggctcgg
tttcaacaacagcaactgcatccaccggcacatcaacaacaagctacgctgcagcctcct
cctccgggttatcctccgtatcaaatgtatcactatcattacggagcaccaccgcagcca
ccaggcagcaatcaaccacagccaatggcgatagcctctcctcgtggagtaccgccagtt
gcctatcattaccctgccgatggaagtcagcctcaaatgatgttgccgcctccaggatca
ttaccttatcctccgccacaatgggcggatcattacttcatgggatatccaccacctcct
ccaagccactatcaacaacctcctccaccaccaacaccagcatctggctcacgaactccg
ggaaagcgaaaggttcgtagagaagacatgaatgcgactatggagactgccgagttgtcg
tatgaagagtcggtgggtggtccagtttcgcctccatcgtcaaagaagaagaaggatgta
tcgttgggtgtaggaacttggccttcgcctgctcaagagcttgttcgagacttgatgcga
ggaacattatcatctcgccgtacacccaacgatcccggctttgacgaaaacagcctcagt
tttggtacaactcctggtagaatgttccctccatctgaatcttggtcacctggtggattc
tttgaagaagaaggcatcttgactgaagaagccgattcctttgatattccagcagcctcg
ccgtttggcaagaggagtgctcttgcggatctcggcaatgctcaagatgctgataagcag
cagctgcaacctatgccaacaccaagtcgggctggcgttaccattcgaggatctccaatc
ttgaagaaatctgaacgtagcgtcgatcaaagtcaagcacgagctgctcctcaacccgaa
gaaactccatcatcaagtcgtcatagaagttcagttgacgacaagaagtcttctaagcaa
ggcaacttccagaccccctctgctagtagcatcgccggtgcttttcgttttaggattgga
ggcgtggatgcatccgatgcgaagaaaggaattaacgacatcaacagtgtcttgcgtgga
agcccggttgctcctcgaacacatccgtctaatcccggtagccttgctcatccacctgtg
atgatggcagtcgcaccaacgcctactcatccaagttcagtatctagaatgacaacgttt
gaaacccctgctgtagcaaaacgtggtggtggtggcaaggagaactcggagaacgaaagc
acctgtaaatgcaagaactccaaatgtttgaagctttactgtgactgcttctcagcggag
aagtactgcgtcggttgcaagtgtatagactgccaaaatacgcctacctttgagtctatt
agagccaaggcaattgccgacaccagagcaaggaatccaaacgccttcaagacgaaactc
aatgcatctgtaacagaacacgcgacgggttgcaagtgcaaaaagtccgagtgcttgaaa
aagtactgtgaatgctttgcgaatttagttgtctgtggagagagttgcaaatgctctaac
tgcaagaactacgtcggttcccaagctttgattgaacgtcgtcgcaagttgaaggatgcc
aaaggaacggagctggccatgcgaccagtagcccgtggttggaaaggtagcatgtctgat
tccaaggttgcctatggtcccggacaatcgcctgtcgttcataatccaagaatgcctcat
cctgccgccacaatgatgatgtcgccaatgcagccgttcgctgcaagtccagcgtcttcg
ttccctcgcccacatggagtgtacgctcacggagcaatgattcaatcagcccaaccccac
tctgcaccaagagcagcattctcttcgtcaatggcaacaccagcaaaacaatatacttcg
aggatgaaccctcctcgtgctcttgtcgtcagtcaaacagttatcgctgctcccgctccg
tcggccgcagtggtggtaagaaaagccaggaaaagattacaaccgccgtctatcaaagtt
gaagcgagagaagcttttttcggtcccatccaacccaaacaaacgagatccgttgctctc
aaggtgttttcctacctcaacaacgaagagctctattgtgcatctattgcctccaaaact
tggtctagccttgcctttgacaaggcgctgtggccgaagaagtag
DBGET
integrated database retrieval system