Thalassiosira pseudonana: THAPSDRAFT_23857
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Entry
THAPSDRAFT_23857 CDS
T01078
Name
(RefSeq) predicted protein
KO
K24348
UBX domain-containing protein 1/4
Organism
tps
Thalassiosira pseudonana
Pathway
tps04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
THAPSDRAFT_23857
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Motif
Pfam:
PUB
UBA_7
Thioredoxin
zf-C2H2_OTU1_C
Redoxin
zf-C2H2
Thioredoxin_2
Thioredoxin_8
AhpC-TSA
Abhydrolase_6
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
7449953
NCBI-ProteinID:
XP_002292124
JGI:
23857
UniProt:
B8C7G1
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Position
8:complement(1060353..1062443)
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AA seq
600 aa
AA seq
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MGTDDDDVGGDRSWRGQFSGISEVAKRQRGSTQSKRLDPSDNTMLHSIDSPTSLRTFITA
HPHSLVCFSATWCGPCTASKPRLEALASQFASDSASVACGIVYEHVLGEDIQTVYKIRAF
PTYVLFERGGAEVGRVEGVKLEEVARLVGEHCRGHDFGSGHSLGGAVAGGAAAVVGGGLS
LEEARAQRLARLGGNTSAASTTAAERATEEDDVEEMKDAAAAAAASDDIKMQVDEATPTT
TSKEVEMVDPTTALKQQDVDTLTSSMGFSIIRAQKGLLNGNGTVEGAVEWLLTHQEDDDI
DDPIEMVPDGGGAVAQSYKCNECGKILSNMANLELHANKTGHSDFEESTQLMKALTEEEK
KAKIEEIKGLLKAKRAQREEAEKEENVDREKQRRFMGKEMAKTREQMEQEARKRSAQMKR
REKEAALKERQRIRAQLEQDKRERAANKGKLGSRLGVDGYTPDAIQYDVPMECEGGGGDE
GDAKKSKKAPPSAAKMDEYITKVSSYRAGGDGGNCLKILKAYIGNVVDNPDEPKYKKINM
ENKAYKTKVKPFLGAKNLLMCVGFSPNKGGDAMELGEDADMGVLKDAKEKLEVAYEKYMK
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgggaaccgacgacgacgacgtcggaggagaccgatcgtggaggggacaatttagtgga
atatccgaggtggccaaaagacaacgcggttcgacacaatcgaagcggctcgacccttcc
gacaacaccatgctccactccatcgacagccccacctccctccgcaccttcatcaccgcc
cacccccattccctggtctgcttctccgccacctggtgcggcccctgcaccgcctccaaa
ccccgactcgaggcgctcgcttctcaattcgcctccgattcggccagcgtcgcttgtgga
atcgtctacgagcatgttttaggagaggacattcaaacggtgtacaagattagagcgttt
ccgacctatgtcttgttcgagagggggggtgcggaggtgggaagggtggagggggtgaag
ttggaggaggtggcgaggttggtgggcgaacattgcagaggtcatgattttgggagtgga
cattcgttgggcggagcggttgctggaggtgccgctgctgttgttgggggcggtttgagt
ttggaggaggcgagggctcaacgattggcgaggttgggtggaaatactagtgctgcgtct
accactgctgctgagagggcgacggaggaagatgatgttgaagaaatgaaggatgctgct
gctgctgctgctgcatccgacgatataaagatgcaagtggacgaagccacaccaacaacc
acttccaaagaagtagaaatggtagatccgactacagcactcaaacaacaagacgttgac
accctcacctcctccatgggattctccatcattcgtgctcaaaaaggattgctcaatgga
aatggtacagttgaaggagctgtagagtggctattgactcatcaggaggatgacgatatc
gatgatcccattgaaatggtccccgacggaggaggagcagtggctcaatcctataaatgc
aacgaatgcggcaagattctatccaacatggccaatctcgaactacatgccaataaaact
ggacattcggactttgaagagtcgacacaattgatgaaggcattgacggaagaggagaag
aaggcgaaaattgaagagattaagggattgttgaaggcgaagagagcacagagggaggag
gcagagaaggaggagaatgtggatagagagaagcagaggaggtttatggggaaggagatg
gccaagacacgtgaacaaatggaacaggaagcacgcaaacgctcggctcagatgaagagg
agggaaaaggaggcagctctaaaggagagacagcgtattcgtgcacaactcgagcaagat
aagagggaacgtgccgcaaacaaaggaaagttgggctctagattgggtgtggatggatac
actcccgatgctattcagtacgatgtaccaatggagtgcgaaggtggtggaggtgacgag
ggagatgcaaagaagtccaaaaaggcaccaccatctgctgcaaagatggatgagtacatt
accaaagtatcctcctatcgtgccggtggcgacggaggcaactgtctcaaaatcctcaaa
gcatacattggcaacgtggtagacaatccagacgaacccaaatacaaaaagatcaatatg
gagaacaaagcttacaaaacaaaggtgaagccattcttgggagccaagaacttgttgatg
tgtgtgggatttagtccgaataagggtggggatgcgatggagttgggggaggatgcggat
atgggtgttttgaaggacgcgaaggagaagttggaagttgcttacgagaagtacatgaag
tga
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