Thalassiosira pseudonana: THAPSDRAFT_23888
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Entry
THAPSDRAFT_23888 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PT
Motif
Other DBs
NCBI-GeneID:
7452382
NCBI-ProteinID:
XP_002292149
JGI:
23888
UniProt:
B8C7L2
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Position
8:complement(1199622..1205452)
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AA seq
909 aa
AA seq
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MIIMKRAMLLLLMGSLVLTNAISPSNKPSESPSSSSIPSRDPSSEPSSIPSRDPSSERHK
NENVIVMLIANAIIPPPFYSLKPSSIPSKQPSSNPSSNPSESPSSIPSRDPSSEPSSIPS
KVPSSEPSSNPSESPSSIPSKQPSSEPSSNPSESPSSIPSKEPSSIPSTNPSSQPSSIPS
KEPSSVPSSAPSEQPSSIPSKEPSSIPSSAPSEQPSSIPSSAPSDVPSSMPSNSPSVSTQ
PSISTQPSVSSIPSISIVPTDSAQPSSLPSTMPSDVPSSQPSSIPSTQPSSIPSSSPSSE
PSSIPSAQPSSIPSSSPSSEPSSIPSAQPSSIPSSSPSSEPSSIPSSQPSSIPSSSPSET
PSSQPSSMPSSEPSSAPSETPSSQPSSMPSSEPSSMPSESPSSQPSSMPSSQPSSMPSET
PSSQPSSEPSSQPSSMPSESPSSQPSSEPSESPSSQPSESPSSQPSAQPSESPSSQPSES
PSESPSAQPSETPSSNPSRSCENLRTDCGWGIFNPWTCQCDCPVGICLDSNEQCYVQCQD
TIDVNPWAGCSPGWDCPWFPDTSAGHCKSEMHQTETYEIYRTASECCEAHFAGSSSCLAD
SKASHVPFPWPIYQVRPNVPPGYPSGAKYFPDLSNKLNCVHGRNYEEWMLTEGYDAYYLF
DDAQDCCDMWYPQRTDCPDPERAVTPDTEQEAWFSNPYPMNNYYFPDFDVSSCGFGRDYP
AWMGDNGYEKWYLFTDGDACCSKYFPHATDCPYENTVQTGYYWESYQARQPNDAVLPIIY
NHSYYPDLNANTCINGTDYPSWMISDDVYKRLYIFHEPEDCCAFWFGPSDTSACVGSLVQ
SVYIETNATILATVNQTEELLGMWYPNLDDKLCQRDGEMPSWMLQDGFTQWYLFNTREAC
CGAFQLQNC
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgatcattatgaaacgagccatgctgttgttgctcatggggtcgcttgtattgaccaac
gccatatcaccgtccaacaaaccctcggaatctccaagctcaagctccattccttctcgt
gatcctagtagcgagccgagctccatcccttctcgtgatccgagcagtgagcgtcacaag
aacgagaacgtaattgtaatgctcattgctaacgctatcattcctcctcccttttactct
ctaaagccctcaagcattccttcgaagcaaccaagcagtaatccaagctccaatccttcg
gaatctcctagctccatcccttctcgtgatccgagcagtgagccctcgagcatcccctcc
aaagttcccagcagcgagccctcgtccaatccctccgaatctcctagctccatcccctca
aagcaaccgagcagtgaaccgtcgtccaatccctccgaatctcccagctcgatcccttca
aaggaaccaagctccattccttccaccaacccatcgtctcagccatcgagcatcccttcg
aaggaaccaagcagtgttcccagttcagcaccctcggaacagccatcgagcattccctcg
aaggaaccaagcagtattcccagttctgcaccctcggaacagccctcatccatcccgtct
tcagcacccagcgacgtcccgagcagtatgccttcaaactctccatctgtttctactcag
cccagtattagtactcagccaagtgtatcgtccattccatcaatttcgattgttcctaca
gactcggctcaacccagctcacttccatcaacgatgccctcggacgttcccagtagtcag
ccctctagcatcccatcaacccaacccagttcaatccctagtagctctccatcatccgag
ccgtcaagcatcccatcagctcaacctagctcgatcccgtcttcttctccttcgtccgag
ccctcgagcatcccatcagctcaacccagttcaattccgagcagttctccttcgtctgag
ccctcatcgatcccgtcgagccaaccaagctctatcccgagttcttctccctccgagacg
cccagctctcagccgagcagcatgccgtcgtcagaaccgtcgtcagctcccagcgagacg
cccagtagtcaaccatcctcaatgccttcttcagagccatcatcgatgccctctgaaagc
ccaagcagtcaaccatcgtcaatgccttcttctcagccatcgtctatgccttccgaaact
cccagtagtcagccctcgtcggaaccatcaagccaacccagctccatgccaagcgagtct
ccttcgtctcagccctcttcagaaccctcggaatcaccgtcaagccaaccatccgagagt
ccctcctcgcagccatcggcacagccatctgaatctcccagttctcagccttctgagagc
ccctctgaatctccctcagcacaaccatcagagacaccctcatccaatccgtctcgtagc
tgtgagaacttacgcacggattgtggctgggggatcttcaatccttggacttgtcagtgt
gattgtccagtaggtatatgtcttgattcgaacgagcaatgctacgtccagtgtcaagac
accatcgatgtgaatccttgggcaggatgctctcctgggtgggattgtccttggtttcct
gatacatctgctggacactgcaagtcggagatgcaccagacggagacgtacgagatttat
cgtactgcatcggaatgttgcgaggctcatttcgctggctcgtcttcctgcttagccgat
agtaaggcgtctcacgtaccatttccatggccgatctatcaagttcgtcccaatgtgcct
ccaggatatcctagtggagccaagtacttcccagacttgtcaaacaagttgaattgcgtt
catggtcgtaactacgaggagtggatgctgacagaaggctatgatgcttactacttgttt
gacgatgctcaggattgctgtgatatgtggtatcctcaaagaacggattgtcctgatcca
gagagagctgtcactccagatactgaacaggaggcttggttcagcaatccatacccgatg
aataactactactttccagactttgatgtcagcagctgtggctttggcagagattatcct
gcgtggatgggagacaatggctatgagaagtggtatttgtttaccgatggagatgcatgt
tgctcaaaatacttccctcatgctaccgattgcccctatgagaacactgtgcaaactggg
tactactgggagagctatcaagcaagacagccgaatgatgcagtgcttccaatcatctac
aatcacagctactacccggatctgaatgccaatacgtgtatcaatggaacagattaccct
tcttggatgattagcgacgatgtctacaaacgcttgtacatctttcacgagccggaggat
tgttgtgccttttggttcggaccgtccgacacatctgcctgtgttggatcactcgttcaa
agtgtctacattgaaaccaacgctaccatcttggctacggtgaatcagacggaggagttg
ctgggtatgtggtatccaaatctagacgacaaactatgccagcgtgatggagaaatgccg
tcatggatgcttcaggatggattcactcaatggtatctcttcaatactcgcgaggcatgc
tgtggagctttccagttgcagaattgttag
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