Thalassiosira pseudonana: THAPSDRAFT_23908
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Entry
THAPSDRAFT_23908 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
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Ortholog
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GFIT
Motif
Pfam:
CNNM
CBS
CorC_HlyC
DUF515
Motif
Other DBs
NCBI-GeneID:
7449258
NCBI-ProteinID:
XP_002292385
JGI:
23908
UniProt:
B8C7Q7
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Position
9:complement(82292..>85054)
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AA seq
884 aa
AA seq
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MTTLTLFILSVVCLLSEVSSASSACGIGRHHHRATGRRASVGLMQPSSSSPSTTTATITA
FASSPFTDPSISSAVLSSRRPRVEAAHQQQQVHRRHTPAFDDLCLSAIANRASSSFDGDN
NSVNHRRQERGNPIRWARNKARSLRSKFTNINNNAAAAIININNNAKSNANKRKRRRVMS
TNKLDLLPSFKPSQRRLPYGLLFAFATLFLTHTPLLSLLPAHASGGMPKRNPDAPIVPLT
TNELASKLTIWLGIFTLLALLHAAEIAITTLYPWKVREFAEEEEKQRSASGGSSGSSNGK
RVRRGTFQALNEDITRVLTTILVTSTACSIYATTLFTHLADHIFGTYAEKWSAIFLTAVT
LFFVELLPKNIGVINAEKVARLMVPPINVLANVVGPFGFALSSLAKGTLKVFGIKTKETS
GVSDSELRLIVTGARDSGTIDHSEQEMIKGVLNLQDQKVREIMKPRVEVVAVPRSMSVAS
VLGVVRESGYSRIPVYDGEIDNIVGIVLAKSVLDFFVKGVLVDKDYRRSGAREEESSSIS
VNGDSQQVAQQQHQQSQSPEDIGKWSFTQPTTGKTMDQYVRSLTGTELASRMETTIQDAD
LIESCYFVPDTANGWSVLQEMRRRRVHMAVVVDEYGGTEGLVSLEDIVEEVVGEIYDEDD
EDDFVFAEDSIIYQEDGTFLIRGDADLEDVDAVLGLNLDEEEVLKEYGTLSGFLCFCAGE
IPRVDDFVMSRGWNFQVVDGDEKRVFQVKVERLLGFFDGEDGDDGDENLVRGFFKSKNKA
TDDAMEVEDEVNGLMTSGGDGASDGDEESAAHFAAEQAVEAAVAESAVGADSASHVEAIS
RQAKVMNSSEALRVERLVEQNEMKAAAVIAEKQASEFGEEPKSP
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgacaacactcaccctattcatactcagcgtcgtctgcctgttgtcagaggtatcgtcg
gcttcctccgcttgtggcatcggcagacatcatcatcgtgccacgggtcgtcgggcatct
gtgggattgatgcagccatcatcatcatctccatcaacaactacagcaacaataacggcg
tttgcctcctctccgttcaccgatccatccatatcgtcagcagtgttgtcgagccgtcgt
ccacgtgtcgaggcagcacatcagcagcagcaggtgcaccgtcgtcacactcccgctttt
gatgacctttgtctgtcggcgattgcaaatcgggcctcttctagttttgacggagacaac
aattcagtgaaccatcgacggcaggagcgtggcaatccaatccgatgggctcgtaacaag
gcaagatcgcttcgttccaagttcaccaacatcaacaacaacgctgcagcagccatcatc
aacatcaacaacaacgccaaatcaaatgccaacaaacgcaaacgacgacgagtaatgagc
accaacaaactcgacctcctcccatcattcaaaccatctcaaagaaggctcccctacgga
ctcctcttcgccttcgccaccctctttctaacacacacacccctcctctctctactaccc
gcacacgcatcgggaggaatgcccaaacgcaatcccgacgcacccatcgttccactaacc
accaacgaattggcatccaaacttaccatatggttgggcatctttaccttacttgcctta
ctccacgcggcggaaattgctatcactacgttgtatccctggaaggtacgtgaatttgca
gaagaagaggagaaacaacgttctgcgtcgggaggatcatctggttcgagtaacggcaaa
cgagtacgcagggggacattccaagcgttgaatgaagatattacacgagtcttgactacc
attctcgtcacctccactgcatgctccatctacgcgacgacgctctttactcatttggct
gatcacatatttggaacgtacgctgagaaatggagtgccattttcttaactgccgtgact
ttattctttgtggaattgcttcccaagaatatcggcgtgattaatgcagagaaggtggcg
aggttgatggttccccctatcaatgtgttggcgaacgtggtgggtccatttggatttgca
ttaagttccttagccaagggtacattaaaagtgtttgggattaaaacaaaggagacttcg
ggggtgtcggattccgaattacggttgattgtcaccggggcacgtgattcaggtacaatt
gatcattcggaacaggaaatgatcaagggagtgttgaatctacaagatcaaaaggtgcga
gagattatgaaaccgcgtgtcgaagtggtggcggtccctcgttccatgtccgtggccagt
gtgttgggcgtggtgagagagagtggatacagtcgtattcccgtgtatgatggagagatt
gataatattgtggggattgtgttggccaagagtgtgttggatttctttgtcaagggtgtt
ttggtggataaggattataggaggagtggtgcgagggaggaggagagtagtagtattagt
gtgaatggcgattctcaacaagtggctcaacaacaacatcaacaaagccagtcacccgaa
gacattggtaaatggtccttcacccaaccaaccacaggtaaaacaatggatcaatacgtc
cgctctctcaccggaacggaactcgcctctcgaatggaaactacaatccaagacgctgac
ttgatcgaatcatgctattttgtgcctgatacggcgaatggatggagtgtattgcaggag
atgcgaaggaggagggttcatatggcggtagttgtggatgagtatgggggtacggagggg
ttggtttcgttggaggatattgtggaggaggttgtgggtgaaatttatgatgaagatgat
gaggatgactttgtatttgcggaagattccatcatatatcaagaggacggcacattcctt
atccggggagatgccgatctcgaagatgtcgatgctgtccttggactcaacctagatgag
gaagaagtattgaaggaatacggcaccctcagtggattcctctgcttttgcgctggagag
attcctcgcgtagatgactttgttatgagtcgaggttggaactttcaggtggtggatgga
gatgaaaagcgagtgtttcaagttaaggtggagcgactattgggattcttcgatggagag
gatggcgacgatggagacgagaatttggttagggggttcttcaagtcaaagaataaagct
acagacgatgctatggaggtagaggatgaggtgaatggtttaatgacatcaggtggtgat
ggtgcttcggatggagatgaagaatcggcggctcattttgcagccgagcaagcagttgaa
gcagcagtcgctgagtctgctgtaggggccgacagtgctagccacgtggaagcaatctct
cgtcaggcgaaagttatgaattcgagtgaggcgttgagggtggagagattagtggagcag
aatgagatgaaggctgctgccgttattgcagagaagcaagctagtgagtttggtgaagag
cccaagtcgccgtag
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