KEGG   Thalassiosira pseudonana: THAPSDRAFT_2409
Entry
THAPSDRAFT_2409   CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K14015  nuclear protein localization protein 4
Organism
tps  Thalassiosira pseudonana
Pathway
tps04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    THAPSDRAFT_2409
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tps03009]
    THAPSDRAFT_2409
Ribosome biogenesis [BR:tps03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    THAPSDRAFT_2409
SSDB
Motif
Pfam: NPL4 GspL_C
Other DBs
NCBI-GeneID: 7450252
NCBI-ProteinID: XP_002287807
JGI: 2409
UniProt: B8BUA2
LinkDB
Position
2:complement(924165..925799)
AA seq 511 aa
MIIRVRTNIGVWRVENLEASATTQDVLDGIAATRPHVVYEKPLSFDPRCDQPINPNQPLS
QQGLGHGAMIHCKVDASTCVENTVVADNASSSMSIDDTNDDKMDTSVPRSTSTNTKRIIA
QDGTIKLIHTDTTTSAADRGFRKGMLPLRDIKKAWTLQEFTAMDDKYNFKIQRQETSWVG
KGGVCLESGAVDDFQAYLRRFQFGKQRFGWLYGRFVEEEDGEKKEEEAESSGGGSSSMHN
NGWGARYMEEEKPKKKNEKVIVEAIYEPPQEPDSEAAEGFIILDDPMEENVEELVKMLGL
VKVGWIVGHPPREEGFQLSSAEVIMAAELQLESAGGIEATPFVTVRVTVDDDGNVVVEAF
QVSLQCMEMVAEEALDVGPNPGFCYVNDTFTAIQEGKPSATVENNFFLTLVPINGYQSEM
FVSMFPKANRAFDDRAQTHDEMKRQLSKSGTAGWSFIDLLSDFGLLLYLTQFLDMKTDMP
KICASVKEREIPLDDGYKIIISSLAGMTGSY
NT seq 1536 nt   +upstreamnt  +downstreamnt
atgatcatccgagtacgaaccaacattggcgtatggcgcgtcgaaaacctagaagcatcg
gcaaccactcaagatgtgttggatggtattgctgcgacgaggcctcatgttgtttatgaa
aagcccctctcattcgacccacgatgcgatcaacccatcaaccccaaccagccactctcc
caacaaggcctcggtcacggtgccatgatccattgcaaagttgacgcttccacctgtgtt
gaaaacactgttgttgccgacaatgcatcctcctccatgtcaattgacgacaccaacgat
gacaaaatggacacctctgtcccaagatcaacatcaaccaacaccaaacgaatcatcgcc
caagacggcaccatcaaactaatccacaccgacaccaccacctccgctgccgacaggggc
ttccgcaaaggaatgctacccctccgtgacattaaaaaagcatggacactccaagaattc
actgccatggacgacaaatacaatttcaaaatacagaggcaagaaacgagttgggtggga
aagggcggagtgtgtttggagagtggggcggtggatgattttcaggcgtatttgagacgg
tttcagtttgggaagcagaggtttgggtggctgtatggacggtttgtggaggaggaggat
ggggagaagaaggaggaagaggcggagagtagtggtggtggcagtagtagtatgcacaat
aatggatggggagcgaggtacatggaggaagaaaaaccaaagaagaagaatgagaaggtg
attgtagaagcgatttacgagcctcctcaagaacctgattcggaagctgccgagggattc
atcatattggacgatccaatggaggagaatgtagaggagcttgtcaagatgttgggattg
gtcaaggtcggttggatcgtcggacatcctccgcgtgaggaggggtttcagctatcgtct
gcggaagtcatcatggcagcggagctccaactggaatcggcggggggtattgaagctaca
ccgtttgttactgttcgtgttaccgtcgatgatgatgggaatgtagtagtggaagcattc
caagtgagtctccaatgcatggaaatggttgccgaggaagcattggacgtgggtcccaat
cctggattttgctacgtcaatgatacattcactgctattcaggagggaaaaccgagtgcc
acggtggagaacaactttttcctcactctcgtgccaatcaatgggtatcaatcggaaatg
ttcgtgtccatgtttcctaaggccaatagagcatttgacgatagggcacaaacacacgat
gagatgaaacgtcagctttccaagagcggtaccgctggatggtcgtttattgacttgcta
tcggatttcgggctgcttttgtatttgactcagtttttggacatgaagacagatatgccc
aagatttgtgcaagtgtgaaggaaagggagattcctttggatgatggatataagattatc
atttcgagtttggctggaatgactggatcgtattga

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