Thalassiosira pseudonana: THAPSDRAFT_24146
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Entry
THAPSDRAFT_24146 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
tps
Thalassiosira pseudonana
Pathway
tps03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
THAPSDRAFT_24146
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tps01009
]
THAPSDRAFT_24146
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tps03019
]
THAPSDRAFT_24146
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_24146
Protein phosphatases and associated proteins [BR:
tps01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
THAPSDRAFT_24146
Messenger RNA biogenesis [BR:
tps03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
THAPSDRAFT_24146
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
THAPSDRAFT_24146
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
HEAT_2
PPP2R1A-like_HEAT
TPR_Trm732_C
HEAT_EF3_N
PDS5
TOR1L1_N
Proteasom_PSMB
TSKS
Motif
Other DBs
NCBI-GeneID:
7451080
NCBI-ProteinID:
XP_002292618
JGI:
24146
UniProt:
B8C992
LinkDB
All DBs
Position
10:382922..385356
Genome browser
AA seq
749 aa
AA seq
DB search
MTTPIQAGSEKERRLVGGCLSVVLMYAVCHIRLQQVISRREVHNPQPFDNDGPTLHHNTH
RPLHRPLPPPQPTPTMPDEAAPLHAAVSGPLASGSCPALTLARSLAYSLESLPAIHPFDL
FVAQLSSDSTEARVDAMKKMATVGEAIGTEDTLGRLIPYLTEHIAMNEKDDDDEILLILA
GQLGLLVDGLVPGSQALPLLPILERLCSIEETVVRDKAVETMSKVVPLLMPGGNYDDGQP
FSLLLGTAKRLAGADWFTAKVSAAGVLPPIYAFYNAHHPKGESADEARRELRILFKDLSE
DDTPMVRRSAAKHLGRMVEAVAGLTQTAEDIVKSGSQPVIAEDNKRLVTFEMVPIFQALS
SDEQDSVRLLAVSCAGSVGCGLAMEPGATAEVVLPVVRGGCADLSWRVRNNLAKVFSTVT
GSLGFKGAQHNAKQSEVFLLFSGLLQDNEAEVRAVAVENIARMAQLGGAELFQAHIAPLL
PTLADDLVMEVRSKLAQTLMDCCDTSICNTLTDEIVLEEFRPLLENFLNDEFAEVQLHIL
TKLSRVSHLLGQMDVVVSSILQMAKAQNWRVREAVGRLLPHLAEARGVSFFEDHLLEPWL
KIMADQVADVRSACVDGMPKLLSVSGSEWIQEQILPHYMRMYEETTTYLTRITVLRSFAA
LAEKDGENENNLSAPLMEQIVNILLKGLKDRVANVRLISARGLGIVTISGQCDEAMMNGM
VVPALTECVTTEEDIDCKYQCQLALESKC
NT seq
2250 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaccgatccaagcaggaagtgagaaggaaagacggctggttggtggttgtctt
tccgtggtgttgatgtacgcagtttgtcacattcgtctccaacaagtaattagtagacgg
gaagttcacaatccacaaccatttgacaacgacggcccaaccctacaccacaacacccac
cgccccctacaccgccctctaccaccaccacaaccaacgccaaccatgccagacgaagcc
gcccccctccacgccgcagtctccggccccctcgcatccggctcctgccccgccctcacc
ctcgcccgttccctcgcctactccctcgagtccctccccgccatccaccccttcgacctc
ttcgtcgcccaactgtcctccgactccaccgaggctcgcgtcgacgccatgaagaagatg
gccacggtgggcgaggcgattgggacggaggatacgctcgggaggctgattccgtatttg
acggagcatattgcaatgaatgagaaggatgacgatgacgagatattgctgattttggct
gggcagctggggctcttggtggatggactggtgcccggatcgcaggcgttgccgttgctg
cccattttggaacgactttgcagcatcgaagagacggtggtacgggataaggccgtggag
acgatgagcaaggtcgtgcccctcctcatgccgggggggaactacgacgacggtcagccc
ttcagcttactcctcggcacggcgaaacgtctcgctggagccgactggttcacggccaaa
gtgtccgcggccggggttctcccccccatttacgcattttacaatgcccatcatccaaaa
ggagagagtgccgacgaggcacggagagagttgaggattttgttcaaggatttgagcgag
gatgatacgcccatggtgagacgttcggctgccaagcatttgggaaggatggtggaggct
gtggcggggttgactcagactgccgaggatattgtcaagagtggatcgcaaccggtgatt
gcggaggataataaacgattggtgacgtttgagatggtgcccatttttcaggctttgagt
agtgatgagcaggattcagtgaggttgctggctgttagttgtgcgggtagtgtggggtgt
gggttggctatggagccgggggctacggctgaggttgtgttgcctgtggttagaggggga
tgtgctgatttatcatggagagttcgaaacaatcttgccaaagtattctcgaccgtcacc
ggatccctcggtttcaaaggagctcaacacaatgcaaagcaatcagaagtattcctactc
ttctccggactacttcaggacaatgaagcggaagttcgtgccgtcgcagtggaaaatatt
gcacgaatggctcaattgggaggagcggagttgttccaagctcatattgcccccctactc
cccacgttggcggatgatctcgtgatggaagtgcgttcgaaattggcccagactctcatg
gactgttgcgatacatccatttgtaatactctcacagacgaaatcgtcttggaagagttc
aggccacttctagaaaacttcctcaatgatgaatttgccgaagtccaactccacatcctc
accaagttgagtcgcgtctctcaccttctggggcaaatggatgtggtcgttagctccata
ttgcaaatggcaaaggcacagaattggcgtgttcgcgaggcggtaggacgactacttccc
catttggcggaagctcggggtgttagcttctttgaagatcatttgctcgaaccgtggcta
aagattatggcggatcaggtggcggatgtgaggtcggcgtgtgttgatggaatgccaaag
ttgttgagtgtgtcaggttcagagtggattcaggaacagatcctgccacattacatgcgg
atgtatgaagagacaaccacgtatttgacgaggattacagtattgaggagctttgcagct
ttggcagagaaagacggggagaacgaaaacaacttgagtgcaccactcatggaacagatt
gtcaatatcttgctgaaggggttaaaggatcgtgtcgccaatgtacgtttgatttcagca
cgggggttgggtattgtgacaatatcgggacaatgcgatgaggcaatgatgaatgggatg
gttgtaccagcgttgacagaatgtgttaccacagaagaagacattgattgcaagtatcag
tgccaactcgctttggaatcaaagtgttaa
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