Thalassiosira pseudonana: THAPSDRAFT_24295
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Entry
THAPSDRAFT_24295 CDS
T01078
Symbol
RPN2
Name
(RefSeq) 26S proteasome regulatory subunit Rpn2 26S subunit, non-atpase
KO
K03032
26S proteasome regulatory subunit N2
Organism
tps
Thalassiosira pseudonana
Pathway
tps03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
THAPSDRAFT_24295 (RPN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tps03051
]
THAPSDRAFT_24295 (RPN2)
Proteasome [BR:
tps03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
THAPSDRAFT_24295 (RPN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN2_N
RPN2_C
PC_rep
HEAT_2
Asparaginase_C
Motif
Other DBs
NCBI-GeneID:
7444533
NCBI-ProteinID:
XP_002296386
JGI:
24295
UniProt:
B8LBP1
LinkDB
All DBs
Position
11
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AA seq
1130 aa
AA seq
DB search
MDTDIPLVKQRESTDLRRRSPTLHPAELSVPTALPNRHPKNRAMASIATPLHNPMSQQQQ
QQQRTPIATASGLLALLSEPDPTLVKIALQKLLSVVDTLWHEIAEALPDLEAIAEGGSVV
VVGGDDDDQDMAGAGGDVVYDLSTRQTAAALASRVFFHLEEPRQALRLALESGSHFELIM
SGTLDNEGVNLKDVAYVERLVNCAVGEYVRRRQREFDDGIVVGGGDSAEEGKEDEEEELD
IDKLQIVVSHQFQRCYQDKAYPHALGVAFESRQLSKVEEILTMLLKNNKDTDVPHIVQVL
QYALTSAESFITSKSFRAEALRLVGNTLTTVLELPTASPSVKRSAACTLVLCMQLLNDAS
AVGGMLGKLMEGGEDEGLLGLQLCFDIVDSGDQKFVNGVAEVLPKGETGEGVGGESTIFT
QAHKVLTEGFTSELALSFLYKNTNADPLIMSNLKKALEERGMGRNSMLHNCAVTAHGYLN
VGTTCDGFLRDNLDWMKKASNWAKFSATASMGVIHAGHTTEAMTLLEPYLPPSAPANDPS
AEHPTVSATGGYAEGGSLYALGLIHGSHAGSSTAKRLEASTFLRNHLRNSHANEVISHGA
ALGVGLTSFGSSDLSVVNELKELLYTDSAVAGEAASIAMGMVLVGSGAGNASSSANEELA
EIVAELRNYSRETHHEKIIRGIAMCLALVNYGQEENADATIEEMRGDRDPIIRYGAIDVS
DDVRMAAVIGLALVLHKTPERVPELVRLLLESFNPHVRYASCMAVGIAMAGTGDAESVAL
LEPMLTDMTDYVRQGALLGTAMIYMQQSDSCNYRKIKTFREKLSTIISDKHQSSLTKMGA
ILSTGLIDAGGRNCALSLGSRNGFTKMTSAVGLVLWLQHWHWFPLMHMFSLAVTPTCTIG
LNKDFKYPKKFEILCNSKPSAFAYPKKLEEKKEEKKKRVETVALSTTAKNRARLARKRAK
EEGDGDGAMDVETKDGEEIKEETKEEAMTEGMDVDGEDKDAAKSNAKGDEAEEKPKKKRE
PEPTSFRVNNPSRITKAQADVCVFDLDQRYRPVRPEEKPYGVIMLTDSTPGEEEDLGAVK
TPAQEEEADPPAAFEWTPPGHPDHPDTTVGKGEAGDAKAEEGSEEAKAAE
NT seq
3393 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgacataccgctggtgaaacagcgggagagcaccgacctccgccgacgttca
ccgacgctgcaccccgctgaactctctgtcccaacagctctgccgaaccgccatccaaag
aatcgagccatggcatcgatagcaacccccctccacaaccccatgagtcaacaacaacaa
caacaacaacgaacacccatcgccaccgcctccggcctcctcgccctcctttccgaacct
gacccgaccctcgtcaaaatcgccctccaaaaactgctttcggtggtggacacgttatgg
catgagattgccgaggccttgcctgatttagaggccattgcggagggcggatcggtggtg
gtagttggtggagacgatgatgaccaagacatggccggagctggaggtgacgtagtgtac
gatttgtccacccgtcagactgccgcggcgcttgcctcccgtgtctttttccatctagag
gaaccacggcaggcgttgaggttggcgttggagagtggatctcatttcgaattgatcatg
agtggcaccttggacaatgagggggtgaatttgaaggatgtagcgtacgtggaacgtctt
gtgaattgtgctgttggagagtatgtgaggaggagacagagggagtttgatgatgggatt
gttgttggtggtggtgattctgccgaagaggggaaggaagatgaggaggaagaattagac
atagacaaattgcagattgtcgtctcccatcaattccaacgatgctaccaagacaaagca
tacccacatgctcttggtgttgcctttgaatcgcgtcaattgtccaaggtcgaagagatc
ctaacgatgcttctcaaaaacaacaaagatacggatgtaccacacattgtccaagtgctg
caatacgctctcacctcggcggaatcgttcatcacttccaagagctttcgcgccgaggct
ctccgtttagttgggaacacactcaccacggtgttggagctccctacggcatcaccgtcg
gtaaaacgtagtgcggcatgtacattggtattgtgcatgcagttgttgaatgatgcgagt
gccgtggggggaatgcttggaaagttgatggaggggggagaggatgagggattgttggga
ttgcaactttgttttgatattgtggatagtggggatcaaaagtttgtgaatggggtggcg
gaagttttgcccaagggggagactggtgagggagtaggaggggagtctactatttttacc
caagctcacaaggttttaacggagggtttcacatcggaactggccctcagcttcctgtac
aagaataccaacgctgatccactcattatgagtaatttgaagaaggcgttggaagaaagg
ggtatggggaggaactcgatgttgcataattgcgcggtgacggctcatggctatttgaat
gttgggacgacgtgtgatgggtttttgagggataatttggattggatgaagaaggcgagc
aattgggccaaattctccgccactgcctccatgggagtcatccacgcaggccacaccacc
gaggccatgaccctcctagaaccctacctccccccctctgcacccgccaacgatccttcg
gcagaacaccccaccgtctctgccacggggggatatgccgagggtggcagtctctacgcg
ctggggttaatccacggaagtcatgcggggagttcgactgccaaacgtttggaggctagt
accttcttaaggaatcatttgaggaactctcatgccaatgaggtcatctctcacggagct
gccttgggtgtgggtttgacgagctttggatctagtgatttgagtgtagtgaatgagctc
aaggagcttttgtacaccgatagtgccgtggctggagaggcggcgagtattgccatgggt
atggttctcgttggaagtggagctggaaatgcctcctcttcggcgaatgaagagcttgct
gaaattgttgccgagcttcgtaactactcgcgtgagactcatcatgagaagattattcgt
ggcattgccatgtgtttggcgttggtcaattacgggcaggaagagaacgctgatgccact
attgaggagatgaggggagatcgtgatcccatcattcgttacggagcaattgatgtgagc
gacgatgtacgaatggcagcagtgattggtttggcgttggtattgcacaaaacccccgaa
cgtgttcccgagttggtccgtcttctcttggagagtttcaaccctcatgttcggtacgcg
agttgcatggctgttggaattgcaatggccggaactggagatgccgaaagcgtagcgttg
ttggagcccatgcttacggatatgacggattacgttcgtcagggagctcttttgggaact
gcgatgatttacatgcagcagagtgattcgtgcaactataggaagatcaagaccttccgt
gaaaagttgtcgaccatcattagcgacaagcatcagagcagccttaccaagatgggagcc
atcctttccacaggacttattgatgctggcggcaggaactgtgccttgtctctcggctcg
cgtaatggatttacgaaaatgacgagtgctgttggcctcgtactttggcttcagcattgg
cattggttccctcttatgcacatgttcagccttgctgtgactcccacgtgcaccattgga
ctcaacaaggacttcaaatatccaaagaagtttgagattctctgtaactccaagccgtct
gcatttgcctacccaaagaagttggaggagaagaaggaagagaagaagaagagagtggag
accgtggccctttctactacagcaaaaaatagggcgagattggctagaaagcgtgcaaag
gaagagggcgacggtgacggtgccatggatgttgagacgaaagacggagaggagatcaaa
gaagagacgaaagaggaggcaatgaccgagggcatggatgttgatggcgaagacaaggat
gcagcaaaatcgaatgctaagggcgacgaagcagaggagaaacccaaaaagaagcgtgaa
cccgaaccaacctcattccgtgtcaacaatccttctcgcatcaccaaggcacaagccgat
gtgtgcgtctttgacttggaccaacgctaccgacccgtccgtcccgaagagaagccttat
ggagtcatcatgctgactgattctactcccggcgaggaggaagatttaggtgctgttaaa
actcctgcgcaggaggaagaggccgatcctccggcggcgtttgagtggactcctccggga
catcctgatcatcctgatacaactgtcggaaagggagaggctggagatgcgaaagccgag
gagggatcggaggaagcaaaagctgcggagtaa
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