Thalassiosira pseudonana: THAPSDRAFT_24418
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Entry
THAPSDRAFT_24418 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBBP
Motif
Other DBs
NCBI-GeneID:
7443234
NCBI-ProteinID:
XP_002293129
JGI:
24418
UniProt:
B8C9Y4
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Position
12:complement(112379..115855)
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AA seq
1028 aa
AA seq
DB search
MKALPLLSLPLLAQPTAATPTADPFLPQGYQSGHFTSTTDSSPLDSEHINDDSYAGAMVY
DAQHNLVYFTGSTYGAYFDGDLMSGDGNDGGGHVNGDTSGVVGGAVGEGGKRQPHLANSD
CFVGVLKLPVEQSPNVKDDPSWLVHSAVGGTEPKLIYARRIGTTQNSETCSTLLILPSVN
DALVTQSPDSKLKLALLGYVNPTPLSSADLSSLSGSGSGSNNSNNGEDAFGGGPNKRQLY
DNNKGGFFNSIAKSGPITQKGRAYGFVVDFDISLESEVASTTTTTTQQQQTPQGENFNKA
YGALLGGYVLESSPLVYPVALTQNKRSTNQIYVVSMHSDKESGVLNPEYKSTIQEESDGS
LRMRPDGTLGGAGGNGGDVVGGVPKYGTDFYVKVQQLSITPYQELMDIEPTPTEKVKKTM
ESGWGFGFKLNDARDVRPSCIEFVKGRTPDEDLLLLAGTTRKNGEGGYEELDGFVTKLVP
PPPSPVDGSEANVIVQDESSHPTKRIDSTTGRDETVTSICLPPPNPDTGAVTHAFVVGSI
ANSQSASNPSGKDPSLAYILMMKLDDMSTIWKQRIPSIHPSGIGGDVLGEGCAVSPDGSV
VYLAGTIDGGSALNTGLPGNPSDPDDPNSPPIEPIGGTTDVFVVAYDVGFGNVKWGKQIG
TVDEDKLARGGGVTVDNEGNVMIMGSTRGPMQRYRPNSAEGRRERQLQGQSQQQQTTNRL
ASDVFFMSLSRENGHYVNAPYTGSPSGNVNKAGSAFAMGSNGGLSAGGIAGISIAVIAVT
CAVLLLVRRRRANNRNNKEIGRMWRNDGGDDFSFDQGGSGFRDQSIGGRKCSGRDRSDRN
ASSGALRIVRGGVQDDDWDDGADRISRSATWMTNNTKNVKKKFSMFKSSGDGSTSSISGS
NSSGYKPKSYTTKRSSENLNFLSSLREEANSTMTKMFKDSPDTTTDPRLDDGASIKSLLS
HYREVRKNKLFDGDDDSKKDDDDSVDGKKNALRSHPPPPPPRPNAVNNEVRRMSSDGSAD
GLAEFTIV
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcactccccctcctctccctccccctcctcgcccagccaaccgccgccacacca
acggccgacccatttctcccccaaggctaccaatcaggacacttcacctccaccactgat
tcgtcccccctcgattctgaacacatcaacgacgactcctatgccggagccatggtgtac
gatgctcagcataacttggtgtattttacggggagtacgtacggtgcttattttgatggg
gatttgatgagtggcgatggcaacgatggcggtggacatgtgaacggtgacactagtggt
gtggtgggaggtgccgtgggggagggagggaagcgtcaaccgcatttggccaatagtgac
tgcttcgtgggagtgttgaagttgcctgtggagcagagtccgaatgtgaaggatgatccg
agttggttggttcatagtgcagtgggagggacagagcccaagttgatttatgccaggcga
atcggcacaacccaaaactccgaaacatgctccaccctcctaatcctcccctccgtcaac
gatgcactcgtcacacaatcaccggatagtaagttaaagttggcactcttgggatatgtc
aatcctactccattgtcgagtgctgatttgagcagtttgagtggcagtgggagcggaagc
aacaacagcaataatggagaagatgcatttggaggaggacccaataagagacaactatac
gacaataacaagggtggattcttcaattccattgccaagagtggaccgattactcaaaaa
ggacgagcttatggatttgtagttgactttgacatttcattggagagtgaggttgcatca
actactaccaccactactcaacaacaacaaacaccccaaggagaaaacttcaacaaagcc
tacggagccctcctaggaggctatgtccttgaatcctcacccctcgtctaccccgtggca
ctcacccaaaacaaacgatccactaaccaaatctacgtcgtgagcatgcattccgataaa
gagagtggggtgttgaatccagagtataagagtacgattcaggaggagagcgatggtagt
ttgaggatgaggccggatgggactttggggggtgctggtgggaatggtggggatgttgtg
gggggtgttccaaagtatggtactgacttttacgtcaaagtacaacaactaagcatcaca
ccctaccaagaactaatggacattgaacccacacccaccgaaaaagtcaaaaagactatg
gaatcaggatggggatttggattcaaactaaacgatgccagagatgtacgtccctcctgc
attgagtttgtaaagggtcgtactcccgatgaggacttgttactattggctggtactacg
aggaagaatggagaaggtggatacgaagagttagatgggtttgttaccaagttggttcca
ccgccaccaagtcctgtggatggtagtgaagcgaatgtgattgtgcaggatgaatcgagt
catcctacgaaacgtattgattctaccactggaagagatgagacggtgacttccatatgt
ttgcctcctcccaatccagacactggagcggtgacacatgcttttgttgttgggtctatt
gccaattcgcagagtgcgtccaatcctagtggaaaggatcctagtctggcttacattcta
atgatgaagttggatgacatgtccactatttggaagcaacgtattccatctattcatcca
tcgggtattggaggagatgtgttgggagaaggatgtgccgtttcgcctgatggaagtgtg
gtatatcttgctggcactattgatggaggatcagcattgaatacgggcttgccgggcaat
ccgtcggaccccgatgatcccaactcgcctccgatcgaaccgattggtggaactacggat
gtgtttgtggttgcatatgatgttggattcggcaacgtcaaatggggaaagcaaattggt
accgtggatgaagacaagttggcgagaggtggaggcgttactgttgataacgagggaaat
gtcatgatcatgggaagcacgagaggaccaatgcagaggtatcgacccaattctgctgaa
ggtagacgggagagacagcttcaggggcaatcgcagcaacagcagactacaaacaggttg
gcgtcggatgtcttcttcatgagcctctctcgcgagaatggacactacgtcaatgctcca
tacactggctctccaagtggaaatgtcaacaaggctggatctgccttcgcgatgggatct
aacggaggactgtctgcaggagggattgctggcatatcaatcgctgtgattgcagtcacg
tgtgccgtacttctccttgttcgtcgtcgtagagctaacaaccgaaacaataaggaaatt
ggtagaatgtggagaaatgacggaggagacgactttagttttgatcaagggggaagtggc
ttccgtgaccagtctatcggtggaagaaaatgcagtggtcgcgatcgaagtgaccgcaat
gcatcgtccggcgctcttcgtattgtcagaggaggtgtgcaagatgacgattgggacgac
ggtgctgacagaataagcaggagtgctacgtggatgacgaacaataccaaaaatgtcaaa
aagaagttctcaatgttcaaatcttccggagatggaagtacgagcagcatttctggttca
aacagtagtggatacaaaccaaagagctacactacaaagaggagcagtgagaacctcaac
ttcttgtcttcgttgcgagaggaagcaaactcaacaatgacgaagatgtttaaagactct
cctgatactacgacagatcctcggttggacgatggagcatcaatcaaatcactcttgagc
cactacagagaagttagaaaaaacaaactgtttgatggagacgatgatagtaagaaggat
gacgacgatagcgttgatggcaaaaagaatgcactccgttcccatcctccgccaccgcct
ccgcgtccaaatgctgtgaataatgaagtcaggagaatgtcaagtgatggaagtgctgat
ggattggctgaattcactattgtttag
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